prot_F-serratus_M_contig1228.1741.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1228.1741.1
Unique Nameprot_F-serratus_M_contig1228.1741.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length636
Homology
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: Q8LNW7_ORYSJ (Putative polyprotein n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q8LNW7_ORYSJ)

HSP 1 Score: 265 bits (677), Expect = 9.240e-73
Identity = 202/669 (30.19%), Postives = 325/669 (48.58%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSAS--LEGPTVPALRKLAIDGNVPPILSSRT----RSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK--------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +K +RTDN  EF  + F+       I H +T P TPQ NGVAE     +  KA  ++   D    +P++  WA+ +   C + ++S + +T++ K+P E+W G P   S LR FG   YA   V   K+ P+  KC+F+G P       +    +  +V SRN+V  ++    D+          E AS      +     P    +AI+ + P I  S +    +S K     ++   +   P    E+ N V   L+         +      EP    +A+ S +   W  A   EM  + +N  +  V  PK+K                     +YK RLVA+G+ Q+ G+ + + +SP    +SIR LL   A  D EL   D + AFL  +++E+ Y+E PE F        V RL +++YGL Q+ R W  +F   M + +F ++  D CV+ KVVDG A I ++++VDD L  AKD++ + +  A+L  +F +KD+G A+  +G  ITR R + +L   Q  Y++ +++RF++        +  G       Y DSDF   LD R S++G V  +    +SW + +Q   A  T+EAEY+A+SE  +  ++LR +  + E        N+F D++ AI L  +     RTKHIDV++H++
Sbjct:  590 VKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNAD----LPKQ-FWAEAVSTTCYLINRSPSYATDK-KTPIEVWSGSPANYSDLRVFGCTAYAH--VDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALS-------VAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSA-IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNMHDVKPFGRSRDG----FVGYVDSDFAGDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGL--YTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHII 1236          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A151QNH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH6_CAJCA)

HSP 1 Score: 229 bits (585), Expect = 1.480e-60
Identity = 198/758 (26.12%), Postives = 332/758 (43.80%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRN---FPTGS-VSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAID---------GNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATL----DVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKD-------------------KLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDV-----------------KKE----------AKIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +KCIRTDN GE+ G F+       I HE  PP TPQ NGVAE     + EK   ++        +P+   W + ++ A D+ + S +   N G+ P E+W GK     HL+ FG   +      E  K+  K ++C+++  P++   F     V+  +VRSR+++     F ED+  Q               ++ P  P  +++            G +   +    ++ +P +                 +E  V   +      +           D  EP++  +A+E ++ E+W +A E E+  + EN  Y  V  P+                    K +YK R+V +G  Q +G+ + E +SP   + SIR +L  AA  D E+   D + AFL  D++EE Y+E PE F E PG    V RL +++YGL QA R W  KF   M    F++  AD CVF K  +    I+++++VDD L   KD+  +      L + F +KD+G  +  +G  I R+R  R L   Q  Y++ +++RF++                 KK+          +K+P +S                                                       G   L +  Y+D+D    +D+R S SG ++  A GAISW SR+Q+  A  T+EAE++A++E  + +L++++  + +       +  ++ D++ AI L+ N+    R+KHIDV++H +
Sbjct:  538 LKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHA----KIPKS-FWGEAVLTAADLINLSPSRPLN-GEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDERTKLDAKVKECIYLRSPKDELGFRLWDPVNKKIVRSRDVI-----FFEDQTIQ--------------DIKKPEKPKQKEVQDSSPIVINNSGGEISQRIDEPNQTEQPESEQXXXXXXXXXXXXXXXQEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEKWLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFAE-PGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIILLLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNEEKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQE--SYVLYCDSQSAIHLSKNSTFHSRSKHIDVRYHWI 1267          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI)

HSP 1 Score: 228 bits (581), Expect = 3.950e-60
Identity = 204/753 (27.09%), Postives = 331/753 (43.96%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPR-NFPT---GSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKL-------AIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPG--AVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASG------------------------------------------------GCGLC-------MEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +KC+R+DN GE+ G F +      I HE T   TPQ NGVAE     + E+   L+        +PR   W + M  A D+ + S +   N G  P ++W GK  +  HLR FG   +      E  K+ PK ++C+F+G    +F       V   +VRSR++V  +    ED  + +  E           L  P V  + +        A + +V P +      ++P                 ++K +  E V+  D G            EP   ++ ++     EW KA + EM  + EN  Y+ V  PK K                    ++K RLV +GF Q +GV + E +SP   ++SIR +L  AA+ + E+   D + AFL  D++EE Y+E PE F +      V +L +++YGL QA R W  KF   MT   + +   D CVF +K  DG   I+++++VDD L   +D + + +  +EL + F +KD+G A+  +G  I RNR    +   Q  Y++ +++RF++ K                              KIP AS                                                    LC       ++ +TDSD    +D+R S SG ++  A GA++W SR+Q+  A  T+EAE++A++E  + +L+L++  +  E  ++     +  D++ AI L+ N+    R+KHIDV++H +
Sbjct:  411 LKCVRSDNGGEYIGPFDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHS----KLPRS-FWGEAMRTAVDLINLSPSVPLN-GDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXX--RSTREKQPSKKYSSNEYVMISDQG------------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGNDQLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNF-IILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCFGKGEPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQ--ELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWI 1140          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU)

HSP 1 Score: 227 bits (579), Expect = 1.030e-59
Identity = 198/740 (26.76%), Postives = 318/740 (42.97%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +KCIRTDN GE+ G F     +  I HE TPP TPQ NG+AE     L E+   ++ +      +P+   W + +  A  V + S   + N  + P ++WFGK     HLR FG   Y       HK A +     FM             +   + N +        DE   QH++   +    +  +                  PI  S              A     P ++  +    + V   D+G            EP    +AMES E ++W  A + EM  + +N  ++ V  PKDK                    +YK RLV +GF Q +G+ + E +SP   ++SIR++L+ AA  D E+   D + AFL  D++EE Y++ P+ F  +     V RL +++YGL QA R W  KF   M    +++  +D CVF K    +  I+++++VDD L   KD + ++R   +L + F +KDMG A+  +G  I R+R+ ++L   Q  Y++ +++RF ++                               +IP AS                                                       GG    +  YTDSD G  +D+R S SG V+  A GA++W SR+Q+  A  T+EAE++A++E  + +L+++++ +  E S       +F D++ AI L  N+    R+KHIDV++H +
Sbjct:  537 LKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNRTLIERVRCMLSKA----KLPKH-FWGEALYTAVHVINLSPAIALN-AEVPDKVWFGKNVKYDHLRVFGCKAYV------HKKAVRSRDVKFMEDQTIEDIDKTEKITSETDNRLSNVDPVLSDE---QHDDVDDQQLGDAFDV------------------PIDDSEXXXXXXXXXXXXXAPE--PPQVQIRRYPSDDYVTLTDEG------------EPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQ--ELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHIDVRYHWI 1227          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: UPI001004C95A (uncharacterized protein LOC114075238 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004C95A)

HSP 1 Score: 226 bits (577), Expect = 2.280e-59
Identity = 215/753 (28.55%), Postives = 328/753 (43.56%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPA-------IEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASGG-------------------------------------------CG-----LCMEA-------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAAN----VFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +KCIR+DN GE+ G F R    + I H+ TPP TPQ NG+AE     L E+   ++ +         +  WA+ +  A  V + S   +  +G  P  +W GK  +  HLR FG   +       HK                         LVRSR++V     F ED+  +  ++        S SL     P    +A + N+    +        H   +R   H  + A       I + + +  E VL  D G            EP +  +AMES E E W  A E E+  + +N  ++ V  PKD+                    +YK RLV +GF Q  GV + E +SP   ++SIR++L  AA+ D E+   D + AFL  D+DEE Y+E PE F E  G    V +L +++YGL QA R W  KF   M+   F++  +D CVF +K  DG+  I+V+++VDD L    +   + +   EL + F +KD+G A   +G  I R+RKA++L   Q  Y++ +++RF++ K                              K+P AS                                             CG     LC          YTDSD    +DTR S SG ++  A GA+SW SR+Q+  A  T+EAE +A+ E  + +L++++   F+     +G A     ++ D++ AI L  N+    R+KHIDV++H +
Sbjct: 1862 LKCIRSDNGGEYIGPFDRYCREQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCMLSDAK-----LSDSFWAEALNTAAYVINLSPAVAL-DGDVPDRVWTGKNVSYDHLRVFGCKAFV------HKK------------------------LVRSRDVV-----FFEDQTIEDFDKADKADFQSSESLVD-VDPVPLTIAPEENLHNDENQVDNEDGDHVQNDR---HDVVDAPVQDDVRIPSSRYSPNEYVLLTDGG------------EPESLDEAMESEEKERWFDAMEDEIKSLHDNHTFDLVKLPKDRKALKNRWVFRVKHEDGNPVPRYKARLVVKGFNQKRGVDFDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKTAFLHGDLDEEIYMEQPEGF-EVKGKENYVCKLKKSLYGLKQAPRQWYRKFGSFMSQQGFKKTSSDHCVFVQKFSDGDF-IIVLLYVDDMLVVGHNTCRIQKLKQELSKSFAMKDLGPARQILGMQIVRDRKAKKLVLSQEKYIQKVLRRFNMDKAKVVSTPLAMHFKLSTKQCPSSDDEKEDMKKVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWNAVKWVMRYLCGTSSLSLCFGTGRPILCGYTDSDMAGDVDTRKSTSGYLVTFAGGAVSWQSRLQKCVALSTTEAELIAVVEACKELLWMKR---FLG---ELGCAQERYVLYCDSQSAIHLGKNSTFHGRSKHIDVRYHWI 2549          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A2K3MXK1_TRIPR (Putative gag/pol polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MXK1_TRIPR)

HSP 1 Score: 224 bits (572), Expect = 7.510e-59
Identity = 207/765 (27.06%), Postives = 328/765 (42.88%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIP------RNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAAS----GSASLEGPTV----PALRKLAIDGNVPPILSSR------TRSRKPHTGVEREALHCFLPAIEAEKENGVE----DVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRF--DVKKEAKIPAAS-------------------------GGCGLCMEA--------------------------------------------------------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            +KCIRT+N GE+ G F +    + I H+ +PP TPQ NG+AE     L E+   L+ +     ++  +  W + +     + + +      +   P  +W GK  +  HLR FG + Y      E  K+  K +KCVF+G        R F    V   L+RSR++V  +    ED  + ++++   E       GS ++    +      +    +D NV  +L+          +      V +E     L     +K   V     + +   DGG           EP N ++ +E    +EW  A E EM  + EN  +  V  PK K                    +YK RLV +GF Q EG+ + E ++P   + SIRM+L  AA+ D E+   D +  FL  D+ EE Y+E P+ F+E      V +L +++YGL QA R W  KF   M    ++  KAD CVF + +  +  I+++++VDD L   K+ + +      L + F +KD+G A   +G  I R+R  ++L   Q  Y+E +++RF  D  K   IP AS                            G  M A                                                        YTDSD    LD R S SG ++  A GA++W S++Q+  A  T+EAE++A+ E  + +L+LR+    ME  ++     +F DN+  I L+ N+    R+KHIDV++H +
Sbjct:  549 LKCIRTNNGGEYVGPFDKYCQDQGIRHQKSPPKTPQLNGLAERMNRTLVERMRCLLSQ-----SMLPKYFWGEALNTVVHLLNLTPCVPL-KFDVPNHVWNGKEVSYDHLRVFGCMAYVHIPKDERSKLDEKSKKCVFVGYGLDEFGYRFFDP--VQRKLIRSRDVVFMEDYTIEDIDKVENKDPTFEDEEIVDIGSTTIAPTPIIFEDAPIENQGMDLNVDNVLNPNDVVDVGATNDVVENEVVQEVASNELRRSTRDKRPSVRYPSNEYVFLTDGG-----------EPENFKEVLEDENKKEWMDAMEDEMQSLRENNTFELVKLPKGKRALKNRWVYRIKQDECTSQRRYKARLVVKGFKQREGIDFGEIFAPVVKMQSIRMVLGLAASLDLEVEKMDVKTTFLHGDLHEEIYMEQPDGFREKGKEDYVCKLVKSLYGLKQAPRQWYQKFNSVMIEHGYKMTKADHCVFFRNLSEDDFIILLLYVDDMLIVGKNISRIRELKNTLSESFSMKDLGAARKILGIEIVRDRNEKKLYLSQEKYVEKVLRRFSMDKAKAVSIPLASHFKLSHKLCPSTDEEKLRMKSIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKVHWEAVKWVMRYLRGSSNLKLTLGCKKPMLVGYTDSDLAGSLDDRKSTSGXMVTFAGGAVAWQSKLQKCVALSTTEAEFIAVVEASKELLWLRKFA--MELGVKQEKYVLFCDNQSVIHLSKNSSFHSRSKHIDVRYHWI 1292          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.200e-55
Identity = 132/381 (34.65%), Postives = 196/381 (51.44%), Query Frame = 0
Query:  281 WRKAEETEMLGMAENCVYNQVARPKDKLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAY------TDSDF-------------------GACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            W  AE  E  G+     + +       ++ K RLVA+GF Q EGV + E +SP PSI SIR+L A A   D +L HFDAEQAF+++++DE  +I +P       G V RL  ++YGL QA R W++     M ++ FE   AD CV R +  G   +VVV+HVDD  +    ++  D+F  EL +   + ++G   +Y GCH  R+     +   Q    E +V +F V  + + P      GL +E Y       D  F                    A  D R SVS A++M A   + +  R Q+     ++EAEYVA+S+ ++  +FLR + +F+ P   VG   V+EDN GAI LA+N   +  +KHID++HH +
Sbjct:  337 WTNAERKEFFGLNAVGTFEEGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGL-KSRCDQFGVELNRYMPISNLGELRWYAGCHFPRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMV---VGLKLEQYDADEPDVDEPFRSLVGYLMWLANQIRPDILNAATDRR-SVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFI 712          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6CMG8_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CMG8_9ROSI)

HSP 1 Score: 213 bits (542), Expect = 3.480e-55
Identity = 186/669 (27.80%), Postives = 311/669 (46.49%), Query Frame = 0
Query:   38 NGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAF-----------SEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL--------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQ--EFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCV-FRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKE----------------------------AKIPAASGGCGLCME----AYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            NGV E     + +K   ++      +N+P+   WA+    AC + ++S + +  E K+  E+WF  P   S L+ FG   YA   V   K+ P+  KCVF+G   +     +    +  +V SR++V  +TA             E++++ +H+         S  +E   V +  + +I  N      +R   + P    E + +   L        N  ED+    D  Q          EP N  +A+   + E+W  A + EM  + +N  ++ V  PK K                     +YK RLV +G+ Q+ GV +T+ +SP    +SIR LL   A  D EL   D +  FL  +++E+ Y++ PE F   E       L +++YGL Q+ R W  +F   MT+ +F+++  D CV F+K  DG   + + ++VDD L  AKD+  + +  A+L ++F++KD+G A+  +G  I R+RKA +L   Q  Y+E ++ RF+++                              + +P +S    L        Y D+DF   LD R S++G V  +   AISW + +Q   A  T+EAEY+A++E  + V++L+ +  F E +  +  + VF D++  I L  +     RTKHIDV++H V
Sbjct:  371 NGVIERMNRTIMKKVRCMLSN----VNLPKS-FWAEAASTACFLINRSPSVAI-EKKTTQEVWFDNPANYSDLKIFGCPAYAH--VDNGKLEPRSIKCVFLGYKASVKGYKLWCPENRKVVISRDVVFDETAMLPNLSLKDSSNKENKKQVEHQINTESTHQASTKIEN-RVASSPQYSIAKN-----RTRREIKPPKKYAEADLVAYVL--------NVAEDI----DANQ----------EPSNYSEAISCEDSEKWMFAMQEEMESLYKNKTWDLVKLPKGKKTVHCKWVFKKKEGTPGVEEPRYKARLVTKGYSQIPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTVFLHGELEEDFYMQQPERFTVLEKEDYACLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNSDGSF-VYLFLYVDDMLIAAKDKGEIRKVKAQLSKEFEMKDLGPAKKILGIEILRDRKASKLYLSQKGYIEKVLCRFNMQSAKPISTPLATHFRLSSALSLQSNDEIEYMSHVPYSSAVGSLITRDGVIGYVDADFAGDLDRRRSLTGYVFTIGVCAISWKATLQTTVALSTTEAEYMAITEACKEVIWLKGL--FSELNEDLQISTVFCDSQSVIFLTKDQMFHERTKHIDVRYHFV 1000          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.150e-54
Identity = 125/375 (33.33%), Postives = 196/375 (52.27%), Query Frame = 0
Query:  309 KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASG---------------------------------------------GC--GLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 636
            K K RLVA+G  Q E + + E Y+PT S++ +RML A+A   + +L HFD EQAF++++++E+  + +P+      G +  L +++YGL Q+ R W+      + A+ FEQ  AD CVFR +  G   +++VVHVDD  A   ++   D+F A+L +   +K++G   +Y GC   R+++   L   Q  + + +   + V     +P +SG                                             G   G  ++ Y D+DF +    R SVSG ++    G +SW SR Q+     T+EAEYVAL +VV+ +LFLRQV  FM P + +    VFEDN+GAI+LA N  ++  +KHIDV+HH +
Sbjct: 1155 KVKARLVARGDMQREYIDFGELYAPTVSVSCVRMLAASACELNLDLCHFDVEQAFVRSELEEDVNMRLPQGCGALSGMIVILGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFRELVHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFL 1528          
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI)

HSP 1 Score: 207 bits (527), Expect = 6.440e-53
Identity = 167/570 (29.30%), Postives = 263/570 (46.14%), Query Frame = 0
Query:    1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRNFPTG-----SVSALLVRSRNIV--ERQTAFSEDEREQQHEEGGAEAAS------------------GSAS--------LEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK-------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKI 515
            +KCIRTDN GE+ G F     R+ I H+ TPP TPQ NG+AE     L E+   L+ +      +PR   WA+ +     V + S +    +G  P  +WFGK  +  HLR FG   +      E  K+  K  +C+F+G   +   G      V   LVRSR++V  E QT    D+ E+   +   +                     G  S         + P   A+     +   PP +  R  SR   + V   +                ++ +   DGG           EP    +AM+S   ++W +A + E+  + EN  +  V  P+ K                   L+YK RLV +G+ Q +GV + E +SP   ++SIR +L+ AA  D E+   D + AFL  D++EE Y+E PE F  Q     V RL +++YGL QA R W  KF   M    +++  +D CVF K   G+  I+++++VDD L   ++ + +++   EL + F +KD+G A+  +G  +TR+RKA++L   Q  Y+E +++RF + K   +
Sbjct: 1293 LKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDA----KLPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSGDLIDVNPAPLDSSPDPIQDDVHGDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSS----------------DEYVLLTDGG-----------EPECYEEAMKSECKDQWVEAMKDELQSLHENHTFELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSDHCVFVKRFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQRFSMDKAKAV 1829          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8LNW7_ORYSJ9.240e-7330.19Putative polyprotein n=5 Tax=Oryza sativa subsp. j... [more]
A0A151QNH6_CAJCA1.480e-6026.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E432_VITVI3.950e-6027.09Retrovirus-related Pol polyprotein from transposon... [more]
G8DCY4_PHAVU1.030e-5926.76Putative gag/pol polyprotein n=1 Tax=Phaseolus vul... [more]
UPI001004C95A2.280e-5928.55uncharacterized protein LOC114075238 n=1 Tax=Solan... [more]
A0A2K3MXK1_TRIPR7.510e-5927.06Putative gag/pol polyprotein n=1 Tax=Trifolium pra... [more]
A0A6H5K0K7_9PHAE1.200e-5534.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6CMG8_9ROSI3.480e-5527.80Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A6H5K4U5_9PHAE2.150e-5433.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D8V3_9ROSI6.440e-5329.30Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..126
e-value: 1.0E-9
score: 39.9
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 294..511
e-value: 2.3E-45
score: 155.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 255..510
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..104
score: 12.677
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1228contigF-serratus_M_contig1228:186161..188605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1228.1741.1mRNA_F-serratus_M_contig1228.1741.1Fucus serratus malemRNAF-serratus_M_contig1228 186161..188605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1228.1741.1 ID=prot_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=polypeptide|length=636bp
IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLRE
KAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELW
FGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVS
ALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKL
AIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACD
DGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQ
VARPKDKLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAK
DGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQA
GRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHA
KDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYL
ESMVKRFDVKKEAKIPAASGGCGLCMEAYTDSDFGACLDTRWSVSGAVLM
LAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMR
VGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013103RVT_2
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf