mRNA_F-serratus_M_contig6456.17399.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI) HSP 1 Score: 227 bits (578), Expect = 5.600e-65 Identity = 103/160 (64.38%), Postives = 126/160 (78.75%), Query Frame = 2
Query: 203 KTMIVKSYGINTAGAFAFAFNVIYPVYFAGSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVRW 682
+ + YGINT GAFAF FN+IYPVYF+G+G TENF+KAY +AL NF+SG++S ++G GPQML ++PPAALLVP+AG+GFAFLGLEQA F AP+VGFL IT +FL WYANVRIGW N++ PE LQVI+VGV+LGW TGLN DV A D V+W
Sbjct: 85 RAFTAQPYGINTPGAFAFVFNIIYPVYFSGTGTPTENFIKAYNVALAANFISGIISVVMGTFGPQMLRVVPPAALLVPVAGIGFAFLGLEQATTPFGAPLVGFLTITTLFLGWYANVRIGWGNYRCPEALQVIIVGVILGWATGLNESEDVDAAVDLVKW 244
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A448ZC90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC90_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.130e-47 Identity = 86/154 (55.84%), Postives = 115/154 (74.68%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFA-GSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVRW 682
YGINT GAFAF FN+IY V+F G GD E F+K Y+++L NF++G++S +LG+ G Q+L +PPA LLVP+AG+G AFLGLE S S P+VG+ + +++L WYA VRIG++NF++PE LQVI+VGVV+GWITGLN DV A V+W
Sbjct: 128 YGINTPGAFAFVFNIIYNVFFTEGGGD--EAFVKGYKVSLAANFITGLISIVLGIFGMQILKFVPPAGLLVPIAGIGIAFLGLENIANSVSVPLVGYNAMLWVYLGWYAGVRIGYKNFRLPEALQVIIVGVVMGWITGLNKSEDVAKASKLVKW 279
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A7S4EKF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF1_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.710e-46 Identity = 82/154 (53.25%), Postives = 115/154 (74.68%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFA-GSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVRW 682
YGINT GAFAF FN++Y V+F+ G GD+ F+K Y+++L NF++G++S LG+ G Q+L +PPAALLVP+AG+G AFLGLE S SAP+VG+ I +++L WYA VR+G++NF++PE LQVI+VGV++GW TGLN +A V+W
Sbjct: 131 YGINTPGAFAFVFNILYNVFFSEGGGDAA--FIKGYKVSLAANFITGLISIFLGMFGTQILKFVPPAALLVPIAGIGIAFLGLENIANSVSAPLVGYNAILWVYLGWYAGVRVGYKNFRLPEALQVIIVGVIMGWATGLNKSEATANASKLVKW 282
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A1Z5K0X1_FISSO (Putative MFS transporter, AGZA family, xanthine/uracil permease n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0X1_FISSO) HSP 1 Score: 173 bits (439), Expect = 2.220e-44 Identity = 83/156 (53.21%), Postives = 111/156 (71.15%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFA---GSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVRW 682
YG+NT AF+F FN++YPVYF+ G F AY +AL NF++G++ST+L GP +L +PPAALLVP+AG+G AFLG+EQ S +AP+VG+ I F FL WY+ VR+G+ N++ PE LQVI+VGV++GW TGLN S V DA D V+W
Sbjct: 199 YGLNTPAAFSFVFNIMYPVYFSLVFTEGPEVA-FKTAYDVALAANFITGLISTVLAFFGPLILQYVPPAALLVPIAGIGIAFLGMEQVTNSIAAPLVGYPAILFAFLGWYSGVRLGYGNYRCPEALQVIMVGVIMGWSTGLNKKSTVEDAMDLVKW 353
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A8J9TWT1_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TWT1_PHATR) HSP 1 Score: 109 bits (273), Expect = 3.370e-25 Identity = 52/94 (55.32%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFAG--SGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAP 499
YG+NT G FAF FN+IYPVYF + +E FL AY++A+ NF++G+LS + G++GP +L +IPPAALLVP+AG+GF+FLGLEQ + +AP
Sbjct: 54 YGLNTVGIFAFIFNIIYPVYFTSVDAVGPSEAFLTAYKVAIAANFITGLLSVVFGIIGPTLLRMIPPAALLVPIAGIGFSFLGLEQLTTTLAAP 147
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A6U0VLX7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VLX7_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.610e-25 Identity = 60/147 (40.82%), Postives = 90/147 (61.22%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFAGSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDA 664
YGINT GAFAF F+++YP Y++ G E A+R+A+ N L GVL+ +GP++ + PP AL+ LA VGFA+L L Q + ++ P+ G LP+T +F +++ V+ G K+P + +L+G LGW T L+N V DA
Sbjct: 106 YGINTPGAFAFMFSIVYPAYYSHDGTHEERAEFAWRVAVACNLLCGVLAMGFAFVGPKVRELTPPVALMTSLASVGFAYLLLNQLLDVYAEPIAGLLPLTIVFAAYFGKVKFG----KVPSAVIALLLGTALGWATRLSNPQMVEDA 248
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A814EYH1_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814EYH1_ADIRI) HSP 1 Score: 101 bits (251), Expect = 1.700e-19 Identity = 56/152 (36.84%), Postives = 88/152 (57.89%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFAGSGDSTENFLK-----AYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDA 664
YGINT GAFAF F +I+PVY+ D+ + + A+ AL NF++G++ +L ++G + IP ALL L+ VGF +L L Q + ++P+V FLP + + +++ ++IG P + ++VG LGW+T LN DV DA
Sbjct: 133 YGINTPGAFAFVFGIIFPVYYTCIRDNNHSNQRVCQELAWYTALASNFITGLIILLLCIVGDFIRRNIPVLALLSSLSAVGFTYLALAQYLPIAASPIVSFLPFGIVMIGYFSGIKIG----PFPIAIVALVVGTALGWLTSLNKGQDVRDA 280
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A818DA00_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818DA00_9BILA) HSP 1 Score: 97.8 bits (242), Expect = 1.060e-18 Identity = 56/157 (35.67%), Postives = 84/157 (53.50%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFA-----GSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVR 679
YGINT GAFAF F +I+PVY S D A +AL NF++G++ +L + G + IP ALL LA VGF +L L Q + ++P+V FLP + + +++ +++G P +++G LGW T LN DV +A V+
Sbjct: 134 YGINTPGAFAFVFGIIFPVYNGCIRENNSSDKRSCQELALYVALASNFITGIIILLLCLFGEFIRRNIPGVALLSSLAAVGFTYLALNQYLPIAASPIVSFLPFAIVMIGYFSGIKVG----PFPIAFIALIIGTALGWATSLNKAEDVRNASLVVK 286
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A815XK08_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815XK08_ADIRI) HSP 1 Score: 98.6 bits (244), Expect = 1.350e-18 Identity = 55/157 (35.03%), Postives = 88/157 (56.05%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFA-----GSGDSTENFLKAYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVR 679
YGINT GAFAF F++I+P YF+ D A+ +A+ NFL+G++ IL + G + P ALL ++ +GF +L L + + ++P+V FLP T + L ++ +V+ G IP V ++VG + W T LN++S+V A V+
Sbjct: 150 YGINTPGAFAFIFSIIFPTYFSCLNRNNGRDKRSCEELAWYVAIASNFLTGIILLILCLFGEFIRKHTPGVALLSSISALGFTYLALNEYLQVAASPLVSFLPFTIVMLGYFGDVKFG----SIPIVFIALVVGTIFAWATSLNHVSNVRTAASIVK 302
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Match: A0A814BIB7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814BIB7_9BILA) HSP 1 Score: 98.6 bits (244), Expect = 1.400e-18 Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 2
Query: 224 YGINTAGAFAFAFNVIYPVYFAGSGDSTENFLK--AYRMALTGNFLSGVLSTILGVLGPQMLTIIPPAALLVPLAGVGFAFLGLEQAVASFSAPMVGFLPITFMFLSWYANVRIGWENFKIPEVLQVILVGVVLGWITGLNNLSDVGDARDFVR 679
YGINT GAFAF F++I+P Y + ++ + + A+ +AL NF++G + +L V+G + P ALL ++G+GF +L L + + P+V F+P + L ++ N++ G IP ++ G LGW TG N V DA V+
Sbjct: 148 YGINTPGAFAFVFSIIFPTYHGCAQINSAAYCRELAWYVALASNFITGCILLLLCVVGEHIRRHTPAVALLSSISGIGFTYLALNEYIDVADVPIVAFIPFAIVMLGYFGNIKFG----PIPVAFVALVAGTALGWATGTNTRQPVIDASHLVK 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6456.17399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6456.17399.1 >prot_F-serratus_M_contig6456.17399.1 ID=prot_F-serratus_M_contig6456.17399.1|Name=mRNA_F-serratus_M_contig6456.17399.1|organism=Fucus serratus male|type=polypeptide|length=192bp MIIGRRTSLGSERILLQQGAREEVRALFAMLKTMIVKSYGINTAGAFAFAback to top mRNA from alignment at F-serratus_M_contig6456:9439..13750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6456.17399.1 ID=mRNA_F-serratus_M_contig6456.17399.1|Name=mRNA_F-serratus_M_contig6456.17399.1|organism=Fucus serratus male|type=mRNA|length=4312bp|location=Sequence derived from alignment at F-serratus_M_contig6456:9439..13750- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6456:9439..13750- >mRNA_F-serratus_M_contig6456.17399.1 ID=mRNA_F-serratus_M_contig6456.17399.1|Name=mRNA_F-serratus_M_contig6456.17399.1|organism=Fucus serratus male|type=CDS|length=1152bp|location=Sequence derived from alignment at F-serratus_M_contig6456:9439..13750- (Fucus serratus male)back to top |