mRNA_F-serratus_M_contig6454.17396.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: D7FTY8_ECTSI (Putative tyrosine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY8_ECTSI) HSP 1 Score: 172 bits (436), Expect = 6.240e-43 Identity = 87/125 (69.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 979 RPSRSPEVAN---KHAREGRDFTSTQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRDLDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
+P+ P+ ++ +H R GRD S+QA AA SLDL F++LEL LIGGG FGQV++G+WRGTPVA+KVL+P AQRDLD+E+AADF+AEVLMLAALRHPNVCLFM ACM PNRAIVTEL+TRGSL
Sbjct: 819 KPAEVPQASSAHGEHVRPGRDLNSSQAFAA-SLDLPFDQLELGELIGGGGFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSL 942
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A6H5KM77_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM77_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.650e-42 Identity = 85/112 (75.89%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 1009 KHAREGRDFTSTQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRDLDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
+H R GRD S+QA AA SLDL F++LEL LIGGG FGQV++G+WRGTPVA+KVL+P AQRDLD+E+AADF+AEVLMLAALRHPNVCLFM ACM PNRAIVTEL+TRGSL
Sbjct: 984 EHIRPGRDLNSSQAFAA-SLDLPFDQLELGELIGGGGFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSL 1094
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A835ZK37_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK37_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.680e-27 Identity = 67/132 (50.76%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 1021 EGRDFTSTQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQ------------------------RDLDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
EG T+ A A G+ +L + ELE +IGGG FGQV++G WRGTPVA+KVL+ AQ ++DD + ADF AEV MLAALRHPN+CLFM AC+ P RAIVTELV RGSL
Sbjct: 470 EGASATAV-AHAVGAFELQYAELEFGRMIGGGGFGQVYRGSWRGTPVAIKVLIQPAQVRARGAAINGEFECAYVCVERLRCEEMDDALVADFAAEVAMLAALRHPNICLFMGACLRPPRRAIVTELVARGSL 600
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A7S2UPN0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPN0_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.060e-24 Identity = 62/129 (48.06%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 982 PSRSPEVAN------KHAREGRDFT-STQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRD-LDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
PS P A+ KH R D T ST +S++ + F EL L ++IGGG FGQV + +W+GTPVAVKVL AQ + + + +F AE+ ML+ +RHPN+CL++ ACM PNRAIVTEL + GSL
Sbjct: 32 PSSPPATADDPRNNIKHKRT--DLTHSTDSSSSLMSSIEFSELTLDSVIGGGGFGQVWRALWKGTPVAVKVLTGSAQAENVSKSVLEEFVAEINMLSGMRHPNICLYIGACMKPPNRAIVTELASHGSL 158
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A1Z5JP08_FISSO (Sterile alpha motif and leucine zipper containing kinase AZK n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP08_FISSO) HSP 1 Score: 117 bits (292), Expect = 2.530e-24 Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 982 PSRSPEVANKHAREGR-DFTSTQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQ-RDLDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
PS P H R+ DFT++ AS G++D F++LEL +IGGG FGQV K WRGTPVAVK+L AQ + + + +F AE+ +L ++HPN+CL+M AC+ PNRAIVTEL GSL
Sbjct: 529 PSNDPRAGIDHKRKSLIDFTNSAASLQGAID--FDKLELIEVIGGGGFGQVWKAKWRGTPVAVKILTGSAQSKHVPRAVLEEFAAEINLLKGMQHPNICLYMGACVVPPNRAIVTELAAHGSL 649
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A1E7FA88_9STRA (Flag-tagged protein kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA88_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.450e-24 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 1039 STQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQR-DLDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGS 1341
S+ ++ + + FEEL+L +IGGG FGQV K WRGTPVAVKVL AQ + ++ +F+AE+ +L +RHPN+CL+M AC+T PNRAI+TEL GS
Sbjct: 2 SSDSATSLQSSINFEELQLQEIIGGGGFGQVWKATWRGTPVAVKVLTGSAQNAHIPKAVSEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGS 103
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A7S0UFT7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFT7_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.250e-22 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 982 PSRSPEVANKHAREGRDFT-STQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRD-LDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGS 1341
PS P H R R+ T ST A+ + + F+EL+L +IGGG FGQV K WRGTPVAVKVL AQ + I +F+AE+ +L +RHPN+CL+M AC+T PNRAI+TEL GS
Sbjct: 345 PSDDPRKCIVHKR--RNLTMSTDAATSLQSSIDFDELQLHEVIGGGGFGQVWKATWRGTPVAVKVLTGSAQNSHIAKPILEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGS 464
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A7S2M3X2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M3X2_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.410e-22 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 982 PSRSPEVANKHAREGRDFTSTQASAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRD-LDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
P+ P + +H R F+S +S+ S + F EL+L ++IGGG FGQV K W+GTPVAVKVL AQ + + + +F E+ M++ +RHPN+CLFM AC+ APNRAI+TEL GSL
Sbjct: 440 PADDPRNSIQHIRTDLTFSSDSSSSLSSK-ITFSELKLEDVIGGGGFGQVWKAKWKGTPVAVKVLTGTAQAEKIPKAVLEEFIGEINMVSGMRHPNICLFMGACLDAPNRAIITELCENGSL 560
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A448ZCV3_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCV3_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.340e-22 Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 982 PSRSPEVANKHAREGRDFTSTQA-SAAGSLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRD-LDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
PS P + H R+ + A S S+D F EL+L +IGGG FGQV K WRGTPVAVKVL AQ + I +F+AE+ +L +RHPN+CL+M ACMT PNRAI+TEL GS+
Sbjct: 785 PSDDPRKSIVHKRQNLTMATDSAKSLQSSID--FAELQLQEVIGGGGFGQVWKATWRGTPVAVKVLTGSAQNTHIAKAILEEFKAEINLLKGMRHPNICLYMGACMTPPNRAIITELAANGSV 905
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Match: A0A7S4K387_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K387_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.340e-22 Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1030 DFTSTQASAAG-SLDLAFEELELTNLIGGGAFGQVHKGMWRGTPVAVKVLVPGAQRD-LDDEIAADFQAEVLMLAALRHPNVCLFMAACMTAPNRAIVTELVTRGSL 1344
D T SAA +L + F EL LT +IGGG FGQV K MWRGTPVAVK+L AQ + + + +F +E+ M++ +RHPN+CL+M AC+ PNRAIVTE GSL
Sbjct: 809 DVTKWSDSAASLTLPIDFSELNLTGVIGGGGFGQVWKAMWRGTPVAVKILSSSAQTENVTKSVLEEFASEINMVSGMRHPNICLYMGACLDPPNRAIVTEFAAHGSL 915 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6454.17396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6454.17396.1 >prot_F-serratus_M_contig6454.17396.1 ID=prot_F-serratus_M_contig6454.17396.1|Name=mRNA_F-serratus_M_contig6454.17396.1|organism=Fucus serratus male|type=polypeptide|length=343bp MVKMTSAITPMLPAHRKSATRHLPPVPNLETYDAARNADKSSQQGSDSYGback to top mRNA from alignment at F-serratus_M_contig6454:17844..20256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6454.17396.1 ID=mRNA_F-serratus_M_contig6454.17396.1|Name=mRNA_F-serratus_M_contig6454.17396.1|organism=Fucus serratus male|type=mRNA|length=2413bp|location=Sequence derived from alignment at F-serratus_M_contig6454:17844..20256+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6454:17844..20256+ >mRNA_F-serratus_M_contig6454.17396.1 ID=mRNA_F-serratus_M_contig6454.17396.1|Name=mRNA_F-serratus_M_contig6454.17396.1|organism=Fucus serratus male|type=CDS|length=2058bp|location=Sequence derived from alignment at F-serratus_M_contig6454:17844..20256+ (Fucus serratus male)back to top |