mRNA_F-serratus_M_contig6450.17395.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI) HSP 1 Score: 674 bits (1740), Expect = 9.600e-220 Identity = 397/726 (54.68%), Postives = 478/726 (65.84%), Query Frame = 3
Query: 147 SRESKAWMGVGVSADDGVSASVRGGFPPAWKA-KAETKGSER--------LPRRGGLGGDDRGDVLPLPRGLDASIKELGISKMEALLKAKFSRMKEGVYHKGVDDDVDFYDPDDEGYEPGF-GEXXXXXXXXXXXXXXSRADAGAQAFSEDSR--DSGAASVAVDEVTGRPEADAASEEGFRMRSPARAAAXXXXXXVETNTPRTRKQASGEKASTPDSSDRNDRRSSDGVQGGVSEKTGRDRRK---------------------------DEEAREVREACFHFFSFICLLLMCTQKNQKEAEATPGPSWEVVSIKDIPALGPRGKTTFKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMRDRPLLVGG---------QAQSLPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRSDSP 2180
S S AW+ G P+WK KAE + ++ LPR+GGLG + R V PLP G+D S+K+LG+ +EA+LK KFS+ K+GV+ DD+ +FYDPDDEG+E GE A Q F R D A V R EA+AA GFRMRSP+RAA XXXXXX +T G + ++P D ++ DG G S + EE + ++ + L K K P++ ++I D+ L + +F+ +GI D +L N++ GI PT+VQ +AIRGL+SEDRDVIIHAHTGSGKTLAYLLPLIA +PDS+ALQAVVVAPGRELASQIFSVCEKLI G GLRS+MVIGGAN LRQVE+ K++KPQIV+ATPGRLCE+VFDRRR+KLG V T+VLDEVDALLR PYD+E+DAI+DA P G+R VFASATGRSP V AA++RYMR+ PL VGG + LP+NIRHT+VT PKVKKF+TLRRLLNTQPFPESVMIFVNDP QV WLTE+LE VGIIAAPLSG+SSKDDRAEIMRRLQDKR+AMVVTTEMAARGLDV HLTHVVNYDL TD +HYVHRAGRCGRAGRPGIVVN++TPD KFV+ KF+K LGLPFDDCEV+ GR W++S ++ P
Sbjct: 525 STGSTAWINAGEGDGSAXXXXXXXXSLPSWKVPKAEQETAKANSAPVPDWLPRQGGLGSESRRGVAPLPEGIDTSVKKLGVKGLEAMLKDKFSKTKDGVF-AAEDDEAEFYDPDDEGFEKLVDGEQLPLVESEDDVVGSVDVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGG-GFRMRSPSRAAXXXXXXXTTGST-------GGGRDASPAVDDYDE----DGSSGNKSASRSKGSXXXXXXXXXXXNGIAVXXXXXXXXXXAVLSEERKREQDG-------VAEKLGKKDKKTKSQAVERKPTYTAINIADMETLEQQASFSFRDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDSNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSSMVIGGANALRQVERFKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPRGRRQAVFASATGRSPVVSAASERYMREEPLFVGGGDLGVGSGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPESVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVVNMATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPP 1230
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA) HSP 1 Score: 441 bits (1134), Expect = 1.350e-129 Identity = 286/703 (40.68%), Postives = 387/703 (55.05%), Query Frame = 3
Query: 327 RGLDASIKELGISKMEALLKAKFSRMKEGVYHKGVDDDVDFYDPDDEGYEPGFGEXXXXXXXXXXXXXXSRADAGAQAFSEDSRDSGAASVA-VDEVTGRPEADAASEEGFRMRSPARAAAXXXXXXVETNTPRTRKQASGEKASTPDSSDRNDRRSSDGVQGGVSEKTGRDRRKDEEAREVREACFHFFSFICLLLMCTQKNQKEAEATPGPSWEVVSIKDIPALGPRGKTTFKGIGILDGRLLSNVQATGIKVPTEVQEAA-----------------IRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQV--------------------------------------------------------EKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGK-RLTVFASATGRSPTVMAAADRYMRDRPLLVGGQ----AQSLPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRSDSPASVAPP 2198
+GLD S+ +L + ++EA L+ KF K+ DD DFYD DDEGYE G+ ++GA+A S ++ SV + EV AA E GFRMR+ +A D ++ R G +K+G+ + E EV A +KEAE +++ + + P TF+ +G+ D +LL N+ G++ PT VQ +A + L+ DV+IHAHTGSGKTLA+LLPL+ + + D D++QAVVVAPGREL SQIF+V ++L+ G G+R+ M+IGGANV RQV +++K KP +++ TPGR+CE+ +++R+KL +V +VLDEVD L+R PYD E+D I+ + S + R TV+ASATGRSPTV AA ++M++ V G A LP NI+HT++T+PKV+KFE+LRRL++TQPFPESVM+FVNDP QV+WLTEKLE VGIIAAPLSG+S K++R EIM+RL D R+AMVVTTEMAARG+DVP LTHVVNYDL TD EHYVHRAG GIVVN++ PDTKFV+ KFS++LGL F D +V+ +L RS PA P
Sbjct: 301 QGLDRSMTKLSLEELEARLRNKFVDAKK--------DDQDFYDKDDEGYE---GDGPPPEEPLEGTAVTKAGESGAEADSXXXEEAAPPSVVEIAEV-------AAKEGGFRMRA--------------------------RQAPEDGYEDGSESR------GSSKKKSGKVVGQGEWEAEVAAA-----------------KKKEAEEFDVEYLSHLTVASLGTVDPTTSGTFEELGVTDVKLLDNLAGMGLERPTHVQASAAFVVLCIENWRKLQASALSELLGGTNDVVIHAHTGSGKTLAFLLPLLQRIDTDDDSVQAVVVAPGRELGSQIFAVAQQLVEGTGIRTQMLIGGANVNRQVYAHVGISQAVALHGARHRPAARNFNSDYHLQATGTTSTVWIVNSQSPIIDDPPRHIDRLKANKPHVLIGTPGRVCELALEKKRVKLANVKFVVLDEVDTLMRPPYDEEIDQIIGTMRSSEYRQTVYASATGRSPTVERAAAKHMKEGYTYVVGNDNAGADGLPPNIKHTIITSPKVRKFESLRRLMHTQPFPESVMVFVNDPHQVRWLTEKLETVGIIAAPLSGESVKEERTEIMKRLTDGRLAMVVTTEMAARGIDVPQLTHVVNYDLPTDAEHYVHRAGXXXXXXXXGIVVNMAQPDTKFVISKFSQRLGLEFVDVDVKDSKL---RRSGEPALTPLP 933
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A7S2XV29_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV29_9STRA) HSP 1 Score: 379 bits (974), Expect = 3.280e-117 Identity = 196/387 (50.65%), Postives = 272/387 (70.28%), Query Frame = 3
Query: 1053 LLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMRDRPLLVGG------QAQSLPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVV-RKFSKQLGLPFDDCEVRAGRLWAISRSDSPASVA 2192
+L N++ GI PT VQ AA++ L+ E RD ++HA TGSGKTLAYLLP + K +PD D +Q VVV P REL +Q+ +V +L+ G G+ +IGGAN+ RQ+E +K+ +PQ+VV TPGRL ++V + RL++G T VLDEVD LL S + EVD ++ S K++ VFASATGRS V AA +M D + VGG +AQ+LP N+ HT ++ + + +RRL++ +P PE +++F ND +V+ L EKL +GI+AAPLSG+SSKDDR E +RRLQ +++++V+TE+AARGLDVP LTHVVNYDL TD EHYVHRAGRCGRAG+PGIVV+ +TP FV+ +KF+ +LG+ F + E + G+L S + P+ VA
Sbjct: 160 MLGNLREMGILQPTSVQAAALQSLLVEGRDGVLHAPTGSGKTLAYLLPAVCKVDPDRDVVQVVVVVPSRELGAQVANVLNQLLPGTGITPLSLIGGANINRQIENLKKKRPQVVVGTPGRLADLVIEYGRLRVGHATVAVLDEVDMLLESQFRGEVDHLMQKFNSQKQV-VFASATGRSEAVEAAMADFMVDG-VFVGGTGSGSERAQALPPNVAHTFISCRPDLRLDNIRRLISVEPAPEGILVFTNDQHKVQILLEKLLDLGIVAAPLSGESSKDDRKEAVRRLQKGQISVLVSTELAARGLDVPQLTHVVNYDLPTDAEHYVHRAGRCGRAGKPGIVVSFTTPKLNFVLTKKFAPKLGIEFQEIEAKYGKLILKSPDEEPSKVA 544
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A0G4F225_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F225_VITBC) HSP 1 Score: 336 bits (862), Expect = 4.740e-98 Identity = 197/460 (42.83%), Postives = 272/460 (59.13%), Query Frame = 3
Query: 921 TQKNQKEAEATPGPSWEVVS----IKDIPALG-----PRGKTTFKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQA----------------------VVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGK----RLTVFASATGRSPTVMAAADRYMRD--RPLLVGGQAQS------LPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRS 2171
T +Q+E P +S + D LG + + T IGI + ++ N++ GI PT Q AI ++ D D+IIHAHTGSGKTLAYLLPL+ + + A A ++VAPGREL +QI VC ++ G GLR AM++GGAN Q+E++K P++VV TPGRL + V DRR++ L V LVLDEVD L+R PY+ ++++++ +P G R T+FASATG +V AA RYMR + GG S +P NI H + + K E LR+ L+T P + V+ F N G+VKWL + L IIAAPLSG +SKDDRAE+ +R+Q+ ++ M V+TE+ ARGLDVP L+HVVN DL TD EHY+HRAGR GRAG PG+V+N TPDT+FV+RK K L + + ++ G++ S+S
Sbjct: 323 TVTDQRETSTRPPQKGSRISRYDGVFDFAELGYVDPEKQRRFTDPDIGIGNAMMVENLRRGGILNPTHTQIKAIPRILQGD-DLIIHAHTGSGKTLAYLLPLLERMLNEHGATAATNATDINGNRGGVQGRRRGPELLIVAPGRELVAQIAKVCRVVLEGTGLRCAMLLGGANPKYQLEQLKG-GPEVVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKGTHSTHRQTIFASATGAQKSVTQAAKRYMRPVWHVIRPGGVKHSDEGVPLIPPNIHHIFMCVREDKVTEALRKFLHTDPVDKRVLCFCNKQGRVKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDLYEGKVMLKSKS 780
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A4D9D1Y7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y7_9STRA) HSP 1 Score: 311 bits (798), Expect = 5.400e-92 Identity = 180/407 (44.23%), Postives = 249/407 (61.18%), Query Frame = 3
Query: 1053 LLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMR----------------DRPLL------VGGQAQSLP------ANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRSDSPASV 2189
LL+N+Q G+ PT +Q AAI L+ + DVI+H++TGSGKTLAYLLPL+++ +P Q +V+AP RELA+QI SV E+L + +IGGA+ RQ+EK++ +PQ++V TPGR+ E+V ++R+ ++G LVLDEVD LL Y ++ +V A+ S R VFASATG SP V A A M+ PLL G QA SLP A++RH ++ TP VK + LRR LNT+P PE V++FVND +V + E L+ GI AA LSGDS+K RA + RL R+ + VTTE+AARG+D+P L+HV+N DL + E YVHRAGR PGIV++ S P T FV+ K+SK+L + + ++ RL +D P S
Sbjct: 74 LLANLQKMGLTAPTLIQAAAIPALLKGE-DVILHSYTGSGKTLAYLLPLLSRLDPAQSHTQLLVIAPSRELAAQIASVAEELTEDTDINVVSLIGGASQQRQIEKLRWERPQVLVGTPGRVAEMVLEKRKARIGRAEMLVLDEVDMLLDDSYHGDLRMLVQAMGS-LRQAVFASATGASPGVEALASNVMQGPYQIISSSSSPSSPSSTPLLDPQEEDAGDQASSLPPSIELPASLRHGILITPPVKAVDNLRRFLNTEPKPECVLVFVNDALKVPRIVEALQAKGIDAAGLSGDSNKQTRANTLARLTSGRLRVCVTTEIAARGIDIPALSHVINLDLPSSLEQYVHRAGRXXXXXXPGIVLSFSPPSTAFVLDKWSKKLKIKVERVDIAHSRLIRYDENDLPDST 478
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A7S2RGS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGS7_9STRA) HSP 1 Score: 314 bits (804), Expect = 3.030e-89 Identity = 176/420 (41.90%), Postives = 250/420 (59.52%), Query Frame = 3
Query: 969 EVVSIKDIPALGPRGKTTFKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKA--------NPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMRDRPL-LVGGQAQS---------LPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRSD 2174
EVV + + + F G G +D + G PT VQ A L + +DV++ A TGSGKT+A++LP++ + + + +++APGRELA Q+F VC KL+ G G+ +A +IGGAN+ RQ E +++ KPQ+++ TPGR+ ++ F ++LKLGS++ +VLDE DA+L P+ +V I+ V +L V ++ +G + T A + R RP+ VGG + +P + H VV + K F LR LLNT+P PE+ MIFVN+ +VK L +KL VGIIAAPL G+SSK+DR EIMRRL R+ +VVTTE+AARG+D P LTHVVN DL D Y HRAGR GRAGRPGIV++ TP K K + LG+ D + GRL ++ +
Sbjct: 443 EVVLANALDEVAGQLDGGFGGRGGIDQPFDAAAAPLGGLAPTRVQAEAALPL-GQGKDVLLAAPTGSGKTIAFMLPVLLRHLLPLQGNNQGRNRPPKVLILAPGRELAVQLFKVCSKLLEGSGISTASIIGGANINRQFENLRKRKPQVLIGTPGRVADIAFVHQKLKLGSISAVVLDEADAMLDDPHAADVKKILTEVKKRTQLVVASATSGSAATREALTHTFGRGRPMDFVGGATEDSMVTKANIVMPPTVMHAVVQMEQRKMFSALRSLLNTEPHPEAAMIFVNEAHRVKVLCDKLLDVGIIAAPLHGESSKEDRTEIMRRLASGRLGLVVTTELAARGIDAPILTHVVNLDLPPDATRYAHRAGRVGRAGRPGIVLSFITPWQKKEATKLTSALGVDLHDAVLHGGRLLMVTTDE 861
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: L1JBQ8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBQ8_GUITC) HSP 1 Score: 291 bits (745), Expect = 4.910e-86 Identity = 164/388 (42.27%), Postives = 233/388 (60.05%), Query Frame = 3
Query: 1023 FKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQA-----VVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDR-RRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMRDRPLLVGGQAQSLPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDK---RVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWA 2159
F+ +G+ LL N+ A G PT VQ+++ ++ E D+I+ A+TGSGKTLA++LP++ K D+L ++VAP RELA QI V + +I G L + IGGAN+ RQ+E I+ +P I+V TPGR+ E+ +++L V L++DEVD L+ +++ I+ A S R T+FASATG V + A R PLL+ LP +RH V+ TP+VKK ++++ N +++FVND +V + +KL G+IAAPL GD SK+DR E+MRRL++ V +VV TE+AARG+D+P L+HVV+ DL TD HYVHRAGR R G G + L P KFVV KF K+LGL F +V L A
Sbjct: 1 FEELGLTSKALLDNLNANGFFTPTPVQKSSFPRIL-EGSDIILSAYTGSGKTLAFVLPIVQKLLAQLDSLDRKGPSFLIVAPSRELAIQILRVVQSVIVGTELFATQAIGGANIQRQIEAIRNSRPHILVGTPGRIVELASKMGAKIRLQGVKYLIVDEVDQCLKKAMQSDLNLILQACSSPARQTIFASATGNVNNVKSLAQSSFRKEPLLLDLAGLRLPPQLRHCVIVTPRVKKIALVKKIFNLNGMT-GLLVFVNDQRRVDIICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGRTARGGAEGTSIVLCEPQEKFVVEKFCKELGLDFQYGQVYEQELIA 386
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A0G4FYR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYR2_9ALVE) HSP 1 Score: 300 bits (768), Expect = 8.810e-83 Identity = 178/435 (40.92%), Postives = 247/435 (56.78%), Query Frame = 3
Query: 999 LGPRGKTTFKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRR--RLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGK----RLTVFASATGRSPTVMAAADRYM----------------RDRPLLVGGQAQS---------------LPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAI-SRSDSPASV 2189
L P +F+ GI+D LL ++ G++ PTE Q + L+S DV+ +HTGSGKTLA+LLPL+ K +P + Q VV+ P RELA Q+ V +L L ++IGGAN RQ++ I++ KPQI+V TPGRL + R RL+ G++ VLDEVDALLR P++ + ++ +P RLTVF SAT V A A ++M RD P GQ++ LP N++H + T + ++ LRRL+ + P + V+ F N G+VK+ + ++ APLSG +SK +RAE+ R LQD V + + TE+ ARG+D+P LTH VN DL D EHYVHRAGR GRAG PG+VVN TPD +FV++K+ K LGL E+ GRLW + SR A V
Sbjct: 466 LEPDKGKSFEDFGIVDPSLLEALREGGVRHPTEAQRR-VMPLLSSGHDVVCESHTGSGKTLAFLLPLLQKIDPSVRSPQMVVIVPSRELAIQVGRVAHQLTEKSELGVGLLIGGANPERQMQAIRKEKPQILVGTPGRLYDAFIGRSGSRLRAGAIRYAVLDEVDALLREPFNHHLTELMHTLPEPTKGHGRLTVFISATAGQENVRAFAHKHMKPHWLFVNPTGVVARPRDTPPPSQGQSEPTEALLPTDKKKWLRLLPPNVQHVYLLTSEHRRLPELRRLMGSDPADKRVLAFCNTQGRVKFAVDWMQRRKRPCAPLSGWTSKAERAEVFRELQDGGVDLTIATEVCARGVDLPFLTHAVNLDLPNDIEHYVHRAGRVGRAGNPGLVVNFVTPDNRFVIKKYEKALGLKIPRVELFEGRLWVMKSRRKMEAQV 899
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: A0A7S4BCL2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCL2_CHRCT) HSP 1 Score: 289 bits (739), Expect = 1.030e-82 Identity = 171/430 (39.77%), Postives = 256/430 (59.53%), Query Frame = 3
Query: 1020 TFKGIGILDGRLLSNVQATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLT-VFASATGRSPTVMAAADRYMRDRPLLVGGQAQS-------LPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKL-EGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAISRSDSPASVAPPDGIVEGGDGTAASFRGT----RSGRDEA 2270
+F+G+G+ ++ N++A I P +Q AA + S RDV+IHAHTGSGKTLA+LLPLI + +P S QA+V++P RELA Q + V E L+ LR + GGAN RQ+E++++ +PQ+++ T GR+CE+ F+ ++LKL V LVLDEVD LR+P+ +++ + +RL +FASAT +P V +A + M + PLL+ Q LP ++ H + P K+ ETL R P P++ ++FVN P + + + + L E G+ AA L G +++R +MR ++ ++++TEM ARGLD+P LTHVVN +L TD HYVHRAGRCGRAG G V++L + V+ K + +LG+ + +VRAG+L + S P P +G AA +G RS RD A
Sbjct: 129 SFEGLGVTVPVVIENLKAAFITTPNALQLAAFEPIAS-GRDVLIHAHTGSGKTLAFLLPLIEQLDPSSKEPQALVLSPSRELAYQTYRVAEMLLKDSPLRVVSLAGGANPSRQIERVRKERPQLLIGTAGRVCELNFEAKKLKLQRVRHLVLDEVDEALRTPHLEPTTRLIELMQDRRRLQLIFASATADTPMVQRSALQLM-ESPLLLQLQLDGATSGGVGLPPHLVHALCAVPAPKQLETLGRFARISPAPKA-LVFVNSPHRAQVVAQMLVESYGVRAASLHGKQEREERVAVMRAFHSGKLPLIISTEMGARGLDIPGLTHVVNLELPTDERHYVHRAGRCGRAGVAGTVLSLVPHKSVPVLTKLASRLGVELAEMQVRAGQLEKLEASP-PRGPRPKAAGGQGAKAAAARRQGRGVAKRSVRDGA 554
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Match: R7QJR1_CHOCR (ATP dependant RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR1_CHOCR) HSP 1 Score: 282 bits (722), Expect = 9.360e-79 Identity = 155/386 (40.16%), Postives = 240/386 (62.18%), Query Frame = 3
Query: 1023 FKGIG----ILDGRLLSNV-QATGIKVPTEVQEAAIRGLVSEDRDVIIHAHTGSGKTLAYLLPLIAKANPDSDALQAVVVAPGRELASQIFSVCEKLIAGMGLRSAMVIGGANVLRQVEKIKRLKPQIVVATPGRLCEVVFDRRRLKLGSVTTLVLDEVDALLRSPYDREVDAIVDAVPSGKRLTVFASATGRSPTVMAAADRYMRDRPLLVGGQAQSLPANIRHTVVTTPKVKKFETLRRLLNTQPFPESVMIFVNDPGQVKWLTEKLEGVGIIAAPLSGDSSKDDRAEIMRRLQDKRVAMVVTTEMAARGLDVPHLTHVVNYDLATDGEHYVHRAGRCGRAGRPGIVVNLSTPDTKFVVRKFSKQLGLPFDDCEVRAGRLWAIS 2165
F G+G + ++L N+ + I+ T VQ +AI ++ + RDV+I +HTG+GKTLA+LLPL+ + +S +Q V+VAP REL QIF CE+L G G+RS +IGGAN +RQV+K+++ +P IVV TPGR+ E+ + R L++ +V V+DEVD +++ +V ++ + + V SAT +V + A +Y+ LL G AQ LP I H P + E +R+L++T P P + FV+DP +V + ++L + I+A L G++ K +RAE++ + R+ ++VTTE+AARGLD+P ++HV N DL TDG+HYVHRAGRCGR G VV+++T +T FV+R+ K+LG+ E R G ++
Sbjct: 173 FCGVGLDALVESEQILKNLKEGLNIETATHVQLSAIPRVLDK-RDVVIQSHTGTGKTLAFLLPLLDEIETESPYVQGVIVAPTRELGMQIFHECERLCEGTGIRSIALIGGANPVRQVDKLRKCQPHIVVGTPGRIAELE-ENRELRVRNVGMFVVDEVDQCVQAGMGEDVIYLLKTMMR-RTQKVLVSATSDVDSVRSFAGKYLHKPVLLRVGGAQRLPRQISHWFCVVPARMRVELVRKLMHTNPVPTRAIAFVDDPRRVDIVVDRLYQMKIVAGALRGNAHKLERAEVLTAFRKGRINLLVTTEVAARGLDIPEISHVFNLDLPTDGDHYVHRAGRCGRVRNVGTVVSITTAETAFVMRRLEKELGVSITRMEPRGGDYGPVA 555 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6450.17395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6450.17395.1 >prot_F-serratus_M_contig6450.17395.1 ID=prot_F-serratus_M_contig6450.17395.1|Name=mRNA_F-serratus_M_contig6450.17395.1|organism=Fucus serratus male|type=polypeptide|length=935bp MGGFKGREGVGGRGRGVPRQGQRQMREVGGRGGYSPTFGEGRELERGSREback to top mRNA from alignment at F-serratus_M_contig6450:4286..32296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6450.17395.1 ID=mRNA_F-serratus_M_contig6450.17395.1|Name=mRNA_F-serratus_M_contig6450.17395.1|organism=Fucus serratus male|type=mRNA|length=28011bp|location=Sequence derived from alignment at F-serratus_M_contig6450:4286..32296- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6450:4286..32296- >mRNA_F-serratus_M_contig6450.17395.1 ID=mRNA_F-serratus_M_contig6450.17395.1|Name=mRNA_F-serratus_M_contig6450.17395.1|organism=Fucus serratus male|type=CDS|length=5610bp|location=Sequence derived from alignment at F-serratus_M_contig6450:4286..32296- (Fucus serratus male)back to top |