prot_F-serratus_M_contig6448.17382.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6448.17382.1
Unique Nameprot_F-serratus_M_contig6448.17382.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length525
Homology
BLAST of mRNA_F-serratus_M_contig6448.17382.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 7.850e-94
Identity = 272/586 (46.42%), Postives = 317/586 (54.10%), Query Frame = 0
Query:   57 ATDFFKNRFKRHNPSKNI-------ASGSESAARGGGFSAIAK-ALTPAETSLLKALNTDVAGGNG-----GVAGLSXLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHADIGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDALHDDIKAKQAAAKKAKDDAEKAEKLKRRAIRAQNRPPNGTEAPPIISAPPA------------------------------------------PLLYTRSSGSVLRGGXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------PAGRSGG-----------------------------ILKVTATPSPSK---EEGIGAGEVIGVVGETDNMPAQAPASAVSLVAXXXXXXXXXXEGSSDVAIPAGGGVLVQSAPGPPPIVSLDEMARADAAEKKRKRKARPAGKKVGWADRAGKILQIVKEFHPEDAALVVSEELQEETPGANEAALXXXXXXXXXKHWAERVKRERDGEK 517
            ++DFF+ R+KR N  + +       A+  E +  G G  A A+  LTPAE SLLK L   VAGG G     GVAG + LDRLMRVMINAPDREARALCLELL+RSK D +VMK FVERRGL FIKGWLAEET S+ M+KLLL+VAKVLPVTYSSL QSDAG+ALKAL KHAD  ++KQAKAVI+HW+  LV D+GEIAKHR++LD LHD +KAKQ A KKAK +   AEK +R   RAQ+RPPNG    PI + PP                                           P     SSG+   G XXXXXXXXXXXXXXXXXXXX                                          PAG+  G                             ILKVTA  + +    ++G  AG                         XXXXXXXX    +   +  AG G       GPPPIVSLDEMARA++ EKKR RKA+PAGKKVGWADRAG+ LQ+VKEFH EDAA  VSE  QE     +  A          +HWAERVKRER+ E+
Sbjct:   83 SSDFFRARYKRQNVGRGVGALAPGWAAALEGSQEGSGGGARAREVLTPAENSLLKTLGDAVAGGEGAGARGGVAGAAGLDRLMRVMINAPDREARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSDIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGRDPPAAAADSSGAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQGTGKGDRGXXXXXXXXXXXXAGXXXXXXXXXXILKVTAVSTAATAGGQDGTAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASAPAASRSAGIGS------GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESD---SVVAATMASHHAGHRHWAERVKREREMER 659          
BLAST of mRNA_F-serratus_M_contig6448.17382.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 8.820e-94
Identity = 234/495 (47.27%), Postives = 272/495 (54.95%), Query Frame = 0
Query:   57 ATDFFKNRFKRHNPSKN---IASGSESAARG-----GGFSAIAKALTPAETSLLKALNTDVAGGNG-----GVAGLSXLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHADIGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDALHDDIKAKQAAAKKAKDDAEKAEKLKRRAIRAQNRPPNGTEAPPIISAPPAPLLYTRSSGSVLRGGXXXXXXXXXXXXXXXXXXXXXXXXPAGRSGGILKVTATPSPSKEEGIGAGEVIGVVGETDNMPAQAPASAVSLVAXXXXXXXXXXEGSSDVAIPAGGGVLVQSAPGPPPIVSLDEMARADAAEKKRKRKARPAGKKVGWADRAGKILQ---------------------IVKEFHPEDAALVVSEELQEETPGANEAALXXXXXXXXXKHWAERVKRERDGEK 517
            ++DFF+ R+KR N  K    +A G   A  G     GG +   + LTPAE SLLK L   VAGG G     GVAG + LDRLMRVMINAPDREARALCLELL+RSK D +VMK FVERRGL FIKGWLAEET S+ M+KLLL+VAKVLPVTYSSL QSDAG+ALKAL KHAD G++KQAKAVI+HW+  LV D+GEIAKHR++LD LHD +KAKQ A KKAK +A  A+K +R                                                                      + +VTA P+ +   G   G   G    TD               XXXXXXXXXX           G        GPPPIVSLDEMARA++ EKKR RKA+PAGKKVGWADRAG+ LQ                     +VKEFH EDAA  VSE  QE     + AA          +HWAERVKRER+ E+
Sbjct:   32 SSDFFRARYKRQNVGKGGGALAPGWAVALEGPQGGSGGGAGAREVLTPAENSLLKTLGDAVAGGGGAXXRGGVAGAAGLDRLMRVMINAPDREARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAEAADADKRRR---------------------------------------------------------------------DLARVTAVPTAATAGGQD-GTADGGAAATDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----IGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQESD---SVAATTMASHHAGHRHWAERVKREREMER 448          
BLAST of mRNA_F-serratus_M_contig6448.17382.1 vs. uniprot
Match: A0A433PUA3_9FUNG (Serine/threonine-protein phosphatase 1 regulatory subunit 10 n=4 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUA3_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 2.540e-5
Identity = 37/130 (28.46%), Postives = 70/130 (53.85%), Query Frame = 0
Query:  109 VAGGNGGVAGLSXLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTS--VAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHAD-IGVKKQAKAVIAHWKNELVR 235
            + G  GG+   + L  L+++M N      R++ L L++ + +D +++K FV  +GL  ++ WL E   S   A++  LL   K LP+   +LK +  GR +K++ K+++   VK+    ++  WK  + R
Sbjct:  133 LVGPTGGIPSPTSLKHLVQIMRNETRLVNRSVMLTLIMNT-NDTNMLKSFVNSKGLAILRAWLVETAKSDNAALLVKLLETLKHLPIDLEALKTTGLGRVVKSMTKNSEKTEVKQLINELMQQWKQLIER 261          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6448.17382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE7.850e-9446.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI8.820e-9447.27TFIIS N-terminal domain-containing protein (Fragme... [more]
A0A433PUA3_9FUNG2.540e-528.46Serine/threonine-protein phosphatase 1 regulatory ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..284
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 164..233
e-value: 1.0E-6
score: 30.6
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 155..233
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 190..231
e-value: 2.5E-5
score: 24.2
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 165..236
score: 12.027

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6448contigF-serratus_M_contig6448:15263..27514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6448.17382.1mRNA_F-serratus_M_contig6448.17382.1Fucus serratus malemRNAF-serratus_M_contig6448 13835..32184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6448.17382.1 ID=prot_F-serratus_M_contig6448.17382.1|Name=mRNA_F-serratus_M_contig6448.17382.1|organism=Fucus serratus male|type=polypeptide|length=525bp
MKQEKPNQPMAGKRSRSDDHASSLTPNGNSSSAASARQDGEPKAGGNARD
VERNENATDFFKNRFKRHNPSKNIASGSESAARGGGFSAIAKALTPAETS
LLKALNTDVAGGNGGVAGLSGLDRLMRVMINAPDREARALCLELLIRSKD
DADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQ
SDAGRALKALYKHADIGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDAL
HDDIKAKQAAAKKAKDDAEKAEKLKRRAIRAQNRPPNGTEAPPIISAPPA
PLLYTRSSGSVLRGGGGVAAGRGSATTATAAAAVSAAAAPAGRSGGILKV
TATPSPSKEEGIGAGEVIGVVGETDNMPAQAPASAVSLVATAPAPATASA
EGSSDVAIPAGGGVLVQSAPGPPPIVSLDEMARADAAEKKRKRKARPAGK
KVGWADRAGKILQIVKEFHPEDAALVVSEELQEETPGANEAALLQHQQHH
HHKHWAERVKRERDGEKVPREVGW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N