mRNA_F-serratus_M_contig644.17365.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig644.17365.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI) HSP 1 Score: 589 bits (1518), Expect = 5.110e-203 Identity = 318/508 (62.60%), Postives = 379/508 (74.61%), Query Frame = 1
Query: 301 MDFTLARFALNTAMASGRTTPEVMLNSGATALLGGMLSNSNAAVVGPAVMALSQMARHPACQRSLGLAGVIPPMVLLCFSSQSPVVLIQTCIALAQLSRYIPNKAIVAGKGGVAAIVHLLKGYTREERITVEVVGRALTALVNVVHRSDANRGLAEECGAAGPTLTIMEAVDDESVLVQARKKACFALANMSFYNYFAALRLLANGADDVACDLIRSSDMTRHSDVVEAAFVFLANLANNALNQSHVGASSAIELAVSACNHCGGPRVVRAAALALCSITLNNSANKTRCASFDAVPVLLKLGIAWGVADDGDRKSDGRSSGLSPSPTAVSAKEEA----AAAAQTIRCVAILAQHPTNALAMKEVGGLEQLIGLIHDSEHNEVMIAAAKAVVVSTPGLDALVRAFRSGKSPEIEMASTHQALMRVREWAFGRTSPPFWLAYGLDVLGCAPEALEARLQKGAGVSAFYKRPEEFFAHSEFFEERDTTIPPDVTLAQDEDLGRTLFHIF 1812
MDFT ARFALN A+AS RT PEVML +GA A L GML+N N V GPAV+ALSQMA H ACQR+LGLAG IPP+VLLCF+SQSP VL+Q CI++AQLSRY PN+AI+A KGGVAA+V LL+G+ RE+ +T +V+G+ALTALVNV +RSDANRGL EECGA PT+TIM+A+D+E VLVQ AC ALANM++ N FAALRLL GAD ACDLIR SD TRHSDV+EAAF+ LANLANN LNQ+HVGA ++ELA+S C HC RVVR+AA ALCS+TL N ANKTRCAS DAV +LL+L AWGVA+D AA Q CVAIL QHPTNALAMK GGL++L LI DSEH+EV+ A AKA+VV P + LVR FR+G+ + E A ++AL+R REWAFGR +PP WLAYGLD+LG E LEARL++ G +++PEEFF ++FFEER+T IPPDVTLAQDEDLG LFH+F
Sbjct: 1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQ----ACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSEVITATAKAIVVLLPDPEELVRTFRNGQVSQAEEAGAYEALVRCREWAFGRRAPPSWLAYGLDLLGAEIEGLEARLKQEGGGQ--FRKPEEFFVPTDFFEERETAIPPDVTLAQDEDLGGMLFHVF 502 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig644.17365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig644.17365.1 >prot_F-serratus_M_contig644.17365.1 ID=prot_F-serratus_M_contig644.17365.1|Name=mRNA_F-serratus_M_contig644.17365.1|organism=Fucus serratus male|type=polypeptide|length=568bp MDAQLLAIEGNVRRLCDETDKKGKGMARAAKRIADSEREEKTVLCQWLNGback to top mRNA from alignment at F-serratus_M_contig644:18878..31146+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig644.17365.1 ID=mRNA_F-serratus_M_contig644.17365.1|Name=mRNA_F-serratus_M_contig644.17365.1|organism=Fucus serratus male|type=mRNA|length=12269bp|location=Sequence derived from alignment at F-serratus_M_contig644:18878..31146+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig644:18878..31146+ >mRNA_F-serratus_M_contig644.17365.1 ID=mRNA_F-serratus_M_contig644.17365.1|Name=mRNA_F-serratus_M_contig644.17365.1|organism=Fucus serratus male|type=CDS|length=3408bp|location=Sequence derived from alignment at F-serratus_M_contig644:18878..31146+ (Fucus serratus male)back to top |