mRNA_F-serratus_M_contig644.17373.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig644.17373.1
Unique NamemRNA_F-serratus_M_contig644.17373.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig644.17373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig644contigF-serratus_M_contig644:375679..376043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size365
Cds size363
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931988.3098087-CDS-F-serratus_M_contig644:375678..3760411622931988.3098087-CDS-F-serratus_M_contig644:375678..376041Fucus serratus maleCDSF-serratus_M_contig644 375679..376041 +
1690964090.924144-CDS-F-serratus_M_contig644:375678..3760411690964090.924144-CDS-F-serratus_M_contig644:375678..376041Fucus serratus maleCDSF-serratus_M_contig644 375679..376041 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig644.17373.1prot_F-serratus_M_contig644.17373.1Fucus serratus malepolypeptideF-serratus_M_contig644 375679..376041 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig644.17373.1

>prot_F-serratus_M_contig644.17373.1 ID=prot_F-serratus_M_contig644.17373.1|Name=mRNA_F-serratus_M_contig644.17373.1|organism=Fucus serratus male|type=polypeptide|length=121bp
LRKSSRVTHQFSPCLQSGDIPCDTTVASRSELLHPSDVCFERLLTLLVRL
ETLRIATERYKTPRRNEENMYRGGGGQVGCFCKVPSFGTSDHVSFLNRNP
TRKICGTDRLGFHCCGSSTYH
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mRNA from alignment at F-serratus_M_contig644:375679..376043+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig644.17373.1 ID=mRNA_F-serratus_M_contig644.17373.1|Name=mRNA_F-serratus_M_contig644.17373.1|organism=Fucus serratus male|type=mRNA|length=365bp|location=Sequence derived from alignment at F-serratus_M_contig644:375679..376043+ (Fucus serratus male)
TTACGAAAGTCATCACGCGTGACCCACCAATTTAGCCCCTGCCTCCAAAG
CGGAGATATACCTTGTGATACTACAGTCGCTAGCCGAAGCGAACTGTTGC
ACCCGTCGGATGTGTGTTTCGAACGTTTGTTGACGCTCCTCGTCAGGCTG
GAGACTTTACGAATAGCAACAGAGCGGTACAAAACGCCTCGCAGGAATGA
GGAGAATATGTATCGGGGGGGAGGTGGTCAGGTTGGCTGTTTTTGCAAAG
TGCCTAGCTTCGGTACGAGCGATCACGTCTCTTTTTTAAATAGGAACCCG
ACGCGCAAGATCTGTGGAACCGACCGTCTGGGCTTTCACTGCTGTGGATC
GTCGACATATCATAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig644:375679..376043+

>mRNA_F-serratus_M_contig644.17373.1 ID=mRNA_F-serratus_M_contig644.17373.1|Name=mRNA_F-serratus_M_contig644.17373.1|organism=Fucus serratus male|type=CDS|length=726bp|location=Sequence derived from alignment at F-serratus_M_contig644:375679..376043+ (Fucus serratus male)
TTACGAAAGTCATCACGCGTGACCCACCAATTTAGCCCCTGCCTCCAAAG
CGGAGATATACCTTGTGATACTACAGTCGCTAGCCGAAGCGAACTGTTGC
ACCCGTCGGATGTGTGTTTCGAACGTTTGTTGACGCTCCTCGTCAGGCTG
GAGACTTTACGAATAGCAACAGAGCGGTACAAAACGCCTCGCAGGAATGA
GGAGAATATGTATCGGGGGGGAGGTGGTCAGGTTGGCTGTTTTTGCAAAG
TGCCTAGCTTCGGTACGAGCGATCACGTCTCTTTTTTAAATAGGAACCCG
ACGCGCAAGATCTGTGGAACCGACCGTCTGGGCTTTCACTGCTGTGGATC
GTCGACATATCATTTACGAAAGTCATCACGCGTGACCCACCAATTTAGCC
CCTGCCTCCAAAGCGGAGATATACCTTGTGATACTACAGTCGCTAGCCGA
AGCGAACTGTTGCACCCGTCGGATGTGTGTTTCGAACGTTTGTTGACGCT
CCTCGTCAGGCTGGAGACTTTACGAATAGCAACAGAGCGGTACAAAACGC
CTCGCAGGAATGAGGAGAATATGTATCGGGGGGGAGGTGGTCAGGTTGGC
TGTTTTTGCAAAGTGCCTAGCTTCGGTACGAGCGATCACGTCTCTTTTTT
AAATAGGAACCCGACGCGCAAGATCTGTGGAACCGACCGTCTGGGCTTTC
ACTGCTGTGGATCGTCGACATATCAT
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