prot_F-serratus_M_contig644.17372.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig644.17372.1
Unique Nameprot_F-serratus_M_contig644.17372.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length82
Homology
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BLAST of mRNA_F-serratus_M_contig644.17372.1 vs. uniprot
Match: D7G5M9_ECTSI (STI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M9_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.400e-9
Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:   22 DLLSMLMNNPKAQAXXXXXXXXXXXXXXXXXXSQNGLGAMAKYQDDPEILGVIEELKSLF 81
            D++  +MNNPKA          XX        +QNG+ AM+KYQDDPEIL +IEELK LF
Sbjct:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
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BLAST of mRNA_F-serratus_M_contig644.17372.1 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 5.430e-8
Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:   22 DLLSMLMNNPKAQAXXXXXXXXXXXXXXXXXXSQNGLGAMAKYQDDPEILGVIEELKSLF 81
            D++  +MNNPKA          XX        +QNG+ AM+KYQDDPEIL +IEELK LF
Sbjct:  828 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 887
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig644.17372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5M9_ECTSI2.400e-950.00STI1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G4D5_ECTSI5.430e-850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041243STI1 domainPFAMPF17830STI1coord: 22..77
e-value: 8.2E-8
score: 32.1
NoneNo IPR availableGENE3D1.10.260.100coord: 21..81
e-value: 4.9E-16
score: 60.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig644contigF-serratus_M_contig644:374412..375441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig644.17372.1mRNA_F-serratus_M_contig644.17372.1Fucus serratus malemRNAF-serratus_M_contig644 374397..375551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig644.17372.1 ID=prot_F-serratus_M_contig644.17372.1|Name=mRNA_F-serratus_M_contig644.17372.1|organism=Fucus serratus male|type=polypeptide|length=82bp
MGGATPPGGATPPGGAGPGASDLLSMLMNNPKAQAVLQKVQSNPKVMAAI
QDVSQNGLGAMAKYQDDPEILGVIEELKSLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041243STI1