mRNA_F-serratus_M_contig643.17345.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig643.17345.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI) HSP 1 Score: 800 bits (2065), Expect = 3.570e-269 Identity = 554/1240 (44.68%), Postives = 695/1240 (56.05%), Query Frame = 1
Query: 22 LTRLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRKARRETGAPAKEKGLQGTESPSADVLLKLAQRGVHLHNNVRKLPQNKEGGSCGGSTGTGAGDWKSATIAYLRATAASLVSLGSTSSPKDCANLCRLFSKAGDMLVEAAEDDIRARAALEMFDDAQAFFSRLPSSFFGKEAQDSERLSLSAEDLVMAMHKASTRRIEVLSRTTGNVDEMVIGYEHQLSIISKFAPPGLSVSTATHAASVGEERFKKGDCRGASRLFRVSLRALGTDLGEGATAIST----GHTG-LRGTILFSLAHCYSQSGDHVQAIQCIKTLGDNRRHSTAG---DPDTTTFLFAKCKVLCDAGDFPGAHEAAEALVEASPPPVAETSGAVE-------LELAAARMVSRRDECSDRSLGLFSMIAARRWTGSPKEFDAQIALLHGLGVAVRVRSERCSA---AGTGNNRAGDALEIPGGPQKGAETVVKIAAKAEETAEKLIYGDKKPGARNL-TGQIGAALEVLITFVEFFQARKEWKACAKWCNRAIRLAEGLMSSPASVAAEPDDSAAAEPSMLAGLLTLRGEMECRLGEFGASTQSLDRALEVCPSYNRAREVAFWSASRDPTCDESSLSSRLSTLLGPRSGLDPRAQCEYLAFCVALVAETSAARDRTNDSGASTVGGTSSVHPMVWDGRIMMVQERLLDTLLMSQQNTTSTSVAHFQTSKDSVEGKSVESTEDALEQSRCGPGEHNSRALSTSANTKGAVA---MEVDEACDGGVCDA----AGLDG-PAARKSSVVSGAGNDGKPCGIVQVVASMVNMVLK-VRAAGTRSTATSTPSVYSVLSRVLQSIDKALSHASSLDINLPDDPDIDFLGKGCWNLAVKCCGPKCRLPCAVKITQHRAMGSDGNEGDNVGHTAARNHQDLLTLAPGFFKASRRWMEMRSNANEASALVARQNCTVLGMAAALEIYDRNYPSEGGFSSAQGAVVREARAILERCRQEVGVASGLNRQLGEVERGTGFETRPVILAAEINVLSRLGDAAAVRSLVAGRESDFLQCSTDLLCHCMQVVEDILDDNPSLAALCRLCIRRCAEDDPIDTSILGGLYRRLLTSSSSRNEALLVADEFSATARDLREGPGMPSDDVDYMAAKCYNLGLQMLEMERPTAAERFVGRALSLLKLGASKSFEGRWADTMHKVYCSALHTKEGNTSTSAGGFPGPSVERTTGRSIGRVSVGGAFRPTGIFPMP 3657
+ RLVDSLLRGR+ SARHEAA A+SD+R+FV WR APA + TE EG S G+G D S + P D L++ A+ ALEMF+DA+ +FSRLP SF+ Q SLSAEDL+MA+HKAS+RRIEVLSRTTGNVD+MV GYE QL I++ +P GL +STA HAASVGEERFKKGDCRGASR+ R++L+A+G D+G G TA ++ HTG LR TILFSLAHC S+SGDH AI+ IK L + G DP FLFAKCKVL DAGD GA+ AA+ALV +P P + + V L+LAAAR++S RD+CSDRSL LF+ IA+R + G+PK DA++ALL GL +A R+RSE A + G + G A A + +AE+TA+ +I + G N+ T Q+ +ALEVL+TF EFFQ R +W++CA+WC RAI LA G D A+ +LA LLTLRGEMECR G+F +S+Q+LD+AL +CP+Y RAREVAFWSA+RDP DESSLS+RLS L GPR+ L P A+ EYLA CV LVA A + G S G +D R+ MVQERLL+ LL+ TT T S ST + GP S + + G +A M V+ D V D G D P +S+ +G G D P VQVVASMV+ L+ V + S SVLSRVL S+DK L A SL I DDPDI +L GCWNLAV+CCG C LP K+ + D D HT R DLL LAP FFKASR W E+ S+AN AL+ RQNC VL +AA LE+YD P +G + E R +LER R+EV VA+GLNR L +V+ E R ++L AE++VL RLGD AVRSLVA RE DFL+CST+LL +C+Q +EALLV DEF+A +RDL+EGPGMPS+DVDY++AKCYNLGLQ+LEM RP AERFVG+AL LLKLG+S +F RW + +HKVY + L K G+ +T+ P + +G G AF TG+FPMP
Sbjct: 1 MARLVDSLLRGRAQASARHEAATAVSDIRAFVHAWR-----PDAPASKDEQDSTEP---------------------------EGRGRTRSHGSGGSD-------------------PSMNRPS------------ADTLLKLAQ-------ALEMFEDAEGYFSRLPGSFYATGWQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPPK-FLFAKCKVLTDAGDLTGAYTAAKALVALTPAPSGKPTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASR-FAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWSPDGQHEKGSAAA--------ATAENEAVGRAEKTADDMIA--EISGCNNVATYQVDSALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKASL---LLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLATCVGLVAGVRKATQDPDQRGESDAGNAR------YDSRVTMVQERLLEALLVEAPATTDMEKEAEPTQAQ----PSTSSTPHEAGSDKDGPA--GSAPVGGAGEDCGGIAPTPMVVEGEGDEDVGDVPVARTGADATPPGNRSAGSNGNGTDPVPTA-VQVVASMVDSALQWVSKEEIKVHRGSAEDAASVLSRVLLSVDKTLRRAGSLGIGPLDDPDIRYLSHGCWNLAVRCCGSNCDLPWGDKVGS--SASKDQMSVDEATHTE-RKRNDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSK-PVDGAPLANATTSSSERRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGPGMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAK-GDAATATN----PIMAGGSGSQASTAIGGRAFLSTGLFPMP 1085 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig643.17345.1 >prot_F-serratus_M_contig643.17345.1 ID=prot_F-serratus_M_contig643.17345.1|Name=mRNA_F-serratus_M_contig643.17345.1|organism=Fucus serratus male|type=polypeptide|length=1227bp MNERTAVLTRLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRKARRETGback to top mRNA from alignment at F-serratus_M_contig643:75030..87072- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig643.17345.1 ID=mRNA_F-serratus_M_contig643.17345.1|Name=mRNA_F-serratus_M_contig643.17345.1|organism=Fucus serratus male|type=mRNA|length=12043bp|location=Sequence derived from alignment at F-serratus_M_contig643:75030..87072- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig643:75030..87072- >mRNA_F-serratus_M_contig643.17345.1 ID=mRNA_F-serratus_M_contig643.17345.1|Name=mRNA_F-serratus_M_contig643.17345.1|organism=Fucus serratus male|type=CDS|length=7362bp|location=Sequence derived from alignment at F-serratus_M_contig643:75030..87072- (Fucus serratus male)back to top |