prot_F-serratus_M_contig642.17342.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig642.17342.1
Unique Nameprot_F-serratus_M_contig642.17342.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length80
Homology
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BLAST of mRNA_F-serratus_M_contig642.17342.1 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-8
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0 
Query:    7 LSEKGLAVAFKSVR-GPWRDTSSFTPPALVEIGAEKPEDCTFQVVVYNIPTRPGWSRMITYQASIVPQ 73
            ++++G  V   S + G  +  ++F PPALVEI  E  +  T  +V YNIPTRPGWSRM   Q +I P+
Sbjct:  271 MTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELEDGKTISLVQYNIPTRPGWSRMFNRQLTITPE 338
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig642.17342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KG92_9PHAE1.930e-844.12Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013626Pheophorbide a oxygenasePFAMPF08417PaOcoord: 29..66
e-value: 1.3E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig642contigF-serratus_M_contig642:24966..31304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig642.17342.1mRNA_F-serratus_M_contig642.17342.1Fucus serratus malemRNAF-serratus_M_contig642 24966..31304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig642.17342.1 ID=prot_F-serratus_M_contig642.17342.1|Name=mRNA_F-serratus_M_contig642.17342.1|organism=Fucus serratus male|type=polypeptide|length=80bp
ELVDGVLSEKGLAVAFKSVRGPWRDTSSFTPPALVEIGAEKPEDCTFQVV
VYNIPTRPGWSRMITYQASIVPQDSIAKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013626PaO