prot_F-serratus_M_contig6419.17338.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6419.17338.1
Unique Nameprot_F-serratus_M_contig6419.17338.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length122
Homology
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.480e-45
Identity = 84/125 (67.20%), Postives = 96/125 (76.80%), Query Frame = 0
Query:    1 PSGVLVFLPSYATLRRVGTIWRACDVWRRLERIKGIIVEEPESGAEFKAARRRYEAAIDA-PGG---------GSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWK 115
            P+GVLVFL SY  L+R   IWR C+VW  LERIKG+IVEEPE+ A+FKAA+RRYE A+D  PGG         GSA+LLAVYRGKMSEG+SFND YARGVLCVGIP+ N G PKI AK  +NDWK
Sbjct:  347 PAGVLVFLSSYKLLQRAVAIWRKCEVWADLERIKGVIVEEPEAAADFKAAKRRYEDAVDGGPGGRGRGRGSAGGSAILLAVYRGKMSEGISFNDHYARGVLCVGIPYPNLGDPKIVAKKCYNDWK 471          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A7S4EN76_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EN76_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.840e-22
Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 0
Query:    3 GVLVFLPSYATLRRVGTIWR----------ACDVWRRLERIKGIIVEEPE-SGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            G LVF PSY+ L++  + W           A DVW  L R KG ++ EP  S  EF+ AR  ++A I   G  S +LLAV+RGKMSEG+SFND YAR VLC+G+P+ N     + AK  +ND +R
Sbjct:  935 GCLVFFPSYSFLQKCVSCWNPNGYNQSQDTAPDVWNHLTRSKGKVIVEPTGSQEEFEVARDDFQATIQESG--SCILLAVFRGKMSEGISFNDAYARAVLCIGMPYPNYKDRGVKAKQSYNDEQR 1057          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 4.720e-22
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 PSGVLVFLPSYATLRRVGTIWRACDVWRRLERIKGIIVEEPESGAEFKAARRRYEAAIDAPGGGSA----------LLLAVYRGKMSE 78
            P+GVLVFL SY  L+R   IWR C+VW  LER KG+IVEEPE+ A+FKAA+RRYE A+D   GG            +LLAVYRGKMSE
Sbjct:  676 PAGVLVFLSSYKLLQRAVAIWRKCEVWADLERSKGVIVEEPEAAADFKAAKRRYEEAVDGGPGGRXXXXXXXXXXXVLLAVYRGKMSE 763          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A7S1R5E9_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R5E9_ALECA)

HSP 1 Score: 95.9 bits (237), Expect = 1.900e-21
Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 0
Query:    1 PSGVLVFLPSYATLRRVGTIWRA-----CDVWRRLERIKGIIVEEPESGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKRSSSGSG 122
            P GVL F PS+A L    + W+        VW R+   KG+++ EP        A   Y AA  +  G  AL LAVYRG+MSEG+SFND   RGV+C+G+P+     P + AK  +ND +R+S  SG
Sbjct:   88 PGGVLCFFPSFAALEACASAWQRPEHAPAQVWARMRGAKGLVLVEPRGSDALPEACASYRAAAHSRAG--ALCLAVYRGRMSEGLSFNDDSCRGVICLGVPYPQAVNPAVAAKRRWNDAQRASRPSG 212          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A7S0C0Q2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0Q2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.960e-21
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    3 GVLVFLPSYATLRRVGTIW---------RACDVWRRLERIKGIIVEEPE-SGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            G+L+FLPSY+ +++    W         R   VW R+++ KG ++ EP  S  +F+ A+R Y   I   G    ++LAV+RGKMSEG+SFND  ARGV+CVG+P+ N     ++AK  +ND +R
Sbjct:   25 GILIFLPSYSFMKKCVRAWNPDFDRSAYRGPSVWDRMKKSKGRVIVEPTGSQDDFEVAKREYIGTIKTKG--KCIILAVFRGKMSEGISFNDDNARGVICVGLPYPNAKDRAVSAKKAYNDEQR 146          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A1E7FKG8_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKG8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.670e-21
Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 0
Query:    3 GVLVFLPSYATLRRVGTIWR-------------ACDVWRRLERIKG-IIVEEPESGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            G L+F PSY+ L +  T W              A DVW RL R KG +IVE  +S  EF+ AR  Y+  I   G  S +LLAV+RGKMSEG+SFND  AR VLC+G+P+ N     + AK  +ND +R
Sbjct: 1290 GCLIFFPSYSFLNKCITCWNPIGPERYSRFTETAPDVWTRLLRSKGKLIVEPTKSQEEFELARDEYKNTIKETG--SCILLAVFRGKMSEGISFNDDNARAVLCIGMPYPNWHDRGVKAKQAYNDEQR 1415          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A448ZL79_9STRA (HELICc2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZL79_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.770e-21
Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    3 GVLVFLPSYATLRRVGTIWRAC----------DVWRRLERIKGIIVEEPESGAE-FKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            G LVF PSY+ L++  + W A            VW R+ R KG IV EP    E F++AR  ++  I   G  S +LLAV+RGKMSEG+SFND YAR V+C+G+P  N    +I AK  +ND +R
Sbjct:  250 GCLVFFPSYSLLQKCVSCWNATGYSRFQVSSPQVWNRILRSKGKIVVEPTGSQEDFESARDDFQDTIRETG--SCVLLAVFRGKMSEGISFNDDYARAVICIGMPLPNLIDRRIKAKKXYNDEQR 372          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A7S0FFG9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FFG9_9DINO)

HSP 1 Score: 94.4 bits (233), Expect = 1.460e-20
Identity = 54/121 (44.63%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    1 PSGVLVFLPSYATLRRVGTIWRACD-----VWRRLERIKGIIVEEPESGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            P G+L F PS+  L      W+A       VW RL   KG +V EP S A    A   Y AA  +  G  A+ LAVYRGKMSEGVSFND   RGV+C+G+P+     P + AK  +ND  R
Sbjct:   69 PGGILCFFPSFVALEACVATWQAAGGPSGHVWARLRCTKGAVVIEPRSAAALPEACASYAAAACSAHG--AICLAVYRGKMSEGVSFNDGLCRGVICLGVPYPQATDPVVIAKRRWNDAHR 187          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A0G4FSP7_9ALVE (Helicase ATP-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FSP7_9ALVE)

HSP 1 Score: 95.1 bits (235), Expect = 2.680e-20
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    3 GVLVFLPSYATLRRVGTIWRAC-------DVWRRLERIKGIIVEEPESGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFND 113
            G+LVF PSYA L+    IW           + +RLE  KG ++ +     +    + +++ AI +  G  A+L AVYRGKMSEG+SFND +AR V C+G+P+ N G P++  K +FND
Sbjct: 1193 GMLVFCPSYAFLQNAAKIWNTPYSPATPQTIMQRLENAKGTVLTDDRDAKQSHRVKEQFDRAITS--GEGAVLFAVYRGKMSEGISFNDDFARAVCCIGLPYPNWGSPEVVQKRVFND 1308          
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Match: A0A7R9YYY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YYY0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.840e-20
Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 0
Query:   26 VWRRLERIKG-IIVEEPESGAEFKAARRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNKGCPKINAKMLFNDWKR 116
            VW RL   KG +IVE   S  +F+AAR  Y   I +  GGS +LLAVYRGKMSEGVSFND YARGV+C+G+P  N     I AK  +ND +R
Sbjct:    1 VWDRLIASKGKVIVESTGSQDKFEAARAEYNGTIKS--GGSCVLLAVYRGKMSEGVSFNDDYARGVICIGLPLPNAFDRSIRAKRDYNDEQR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6419.17338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ0_ECTSI1.480e-4567.20Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S4EN76_9STRA1.840e-2245.60Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A6H5JZN2_9PHAE4.720e-2259.09Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S1R5E9_ALECA1.900e-2141.73Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S0C0Q2_9STRA2.960e-2141.13Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1E7FKG8_9STRA5.670e-2145.31DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A448ZL79_9STRA8.770e-2144.80HELICc2 domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A7S0FFG9_9DINO1.460e-2044.63Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A0G4FSP7_9ALVE2.680e-2040.68Helicase ATP-binding domain-containing protein n=1... [more]
A0A7R9YYY0_9STRA2.840e-2055.43Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 11..118
e-value: 5.2E-5
score: 15.4
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 1..117
e-value: 3.5E-21
score: 76.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1..122
e-value: 5.8E-19
score: 70.3
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6419contigF-serratus_M_contig6419:20096..21635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6419.17338.1mRNA_F-serratus_M_contig6419.17338.1Fucus serratus malemRNAF-serratus_M_contig6419 20096..21635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6419.17338.1 ID=prot_F-serratus_M_contig6419.17338.1|Name=mRNA_F-serratus_M_contig6419.17338.1|organism=Fucus serratus male|type=polypeptide|length=122bp
PSGVLVFLPSYATLRRVGTIWRACDVWRRLERIKGIIVEEPESGAEFKAA
RRRYEAAIDAPGGGSALLLAVYRGKMSEGVSFNDRYARGVLCVGIPFSNK
GCPKINAKMLFNDWKRSSSGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C