mRNA_F-serratus_M_contig6419.17337.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE) HSP 1 Score: 100 bits (250), Expect = 8.500e-21 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 7 WYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHN--LAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAAGRARREVAEEKRR 291
WY Q+A+RA NQA+GRCIRH+ DYGVICLIDER G H LAKW+RDL D+ + DT+D+FF SAP FV+ +++ A R++ + +RR
Sbjct: 1359 WYAQEAYRAQNQALGRCIRHVYDYGVICLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVDTIDQFFASAPGFVREEKERAVVLRQQASVRRRR 1455
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.450e-20 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 7 WYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHN--LAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAAGRARREVAEEKRR 291
WY Q+A+RA NQA+GRCIRH+ DYGV+CLIDER G H LAKW+RDL D+ + TMD+FF SAP FV+ +++ A R + + +RR
Sbjct: 662 WYAQEAYRAQNQALGRCIRHVYDYGVVCLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVGTMDQFFASAPGFVREEKERAAVLRHQASVRRRR 758
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A177WNB6_BATDL (DNA helicase n=5 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WNB6_BATDL) HSP 1 Score: 81.3 bits (199), Expect = 4.720e-14 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFF 210
EWY+ A+RALNQA+GRCIRH ND+G I L+DERF R + NL+KW+R R + L E + FF
Sbjct: 808 EWYSMQAYRALNQALGRCIRHRNDWGAIILLDERFSQSRCTSNLSKWMRTKIRQWKTLQEAEAVLKSFF 876
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A1W0W690_SORBI (DNA helicase n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A1W0W690_SORBI) HSP 1 Score: 80.9 bits (198), Expect = 6.470e-14 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 240
EWY AFRALNQA GRCIRH +DYG I LIDER+ GR ++KW+R+ + + E + KFF++A + ++ K
Sbjct: 708 EWYCHQAFRALNQAAGRCIRHKSDYGGIILIDERYQEGRNVAYISKWLRNAIKKYDSFQETMAELQKFFQNAEEKIKIK 786
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A0L0DAS5_THETB (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DAS5_THETB) HSP 1 Score: 80.9 bits (198), Expect = 6.530e-14 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAA 252
+WYT AFRALNQA+GRCIRH NDYG I L+DERF + +L+KWVR + F G + F +A + + + AA
Sbjct: 1248 KWYTLQAFRALNQALGRCIRHRNDYGSILLVDERFARSSIAPSLSKWVRTAIQSFPNPQAFGQALHNFHSAAAEAAEQRAAAA 1330
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A446TBW4_TRITD (Helicase ATP-binding domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446TBW4_TRITD) HSP 1 Score: 80.5 bits (197), Expect = 8.540e-14 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 240
EWY AFRALNQA GRCIRH DYG I LIDER+ R +++KW+++ + + E D M+KFF+ A + ++ K
Sbjct: 456 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 534
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: N1R1T5_AEGTA (Fanconi anemia group J protein-like protein n=1 Tax=Aegilops tauschii TaxID=37682 RepID=N1R1T5_AEGTA) HSP 1 Score: 80.5 bits (197), Expect = 8.580e-14 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 240
EWY AFRALNQA GRCIRH DYG I LIDER+ R +++KW+++ + + E D M+KFF+ A + ++ K
Sbjct: 548 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 626
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A3B6LQP8_WHEAT (Helicase ATP-binding domain-containing protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A3B6LQP8_WHEAT) HSP 1 Score: 80.5 bits (197), Expect = 8.810e-14 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 240
EWY AFRALNQA GRCIRH DYG I LIDER+ R +++KW+++ + + E D M+KFF+ A + ++ K
Sbjct: 704 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 782
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A3B6KNE2_WHEAT (Helicase ATP-binding domain-containing protein n=16 Tax=Triticinae TaxID=1648030 RepID=A0A3B6KNE2_WHEAT) HSP 1 Score: 80.5 bits (197), Expect = 8.870e-14 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 240
EWY AFRALNQA GRCIRH DYG I LIDER+ R +++KW+++ + + E D M+KFF+ A + ++ K
Sbjct: 785 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 863
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: S8CNP1_9LAMI (HELICc2 domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CNP1_9LAMI) HSP 1 Score: 75.1 bits (183), Expect = 8.980e-14 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 4 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKS 216
EWY Q AFRALNQAIGRCIRH DYG I +DERF R ++KW+R+ + + E +++ FF++
Sbjct: 51 EWYCQQAFRALNQAIGRCIRHRFDYGAIIFLDERFHRERNRVYISKWLRNTIKLYDSFEESLESLKSFFQN 121 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6419.17337.1 >prot_F-serratus_M_contig6419.17337.1 ID=prot_F-serratus_M_contig6419.17337.1|Name=mRNA_F-serratus_M_contig6419.17337.1|organism=Fucus serratus male|type=polypeptide|length=228bp QEWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRback to top mRNA from alignment at F-serratus_M_contig6419:17341..19945- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6419.17337.1 ID=mRNA_F-serratus_M_contig6419.17337.1|Name=mRNA_F-serratus_M_contig6419.17337.1|organism=Fucus serratus male|type=mRNA|length=2605bp|location=Sequence derived from alignment at F-serratus_M_contig6419:17341..19945- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6419:17341..19945- >mRNA_F-serratus_M_contig6419.17337.1 ID=mRNA_F-serratus_M_contig6419.17337.1|Name=mRNA_F-serratus_M_contig6419.17337.1|organism=Fucus serratus male|type=CDS|length=1368bp|location=Sequence derived from alignment at F-serratus_M_contig6419:17341..19945- (Fucus serratus male)back to top |