prot_F-serratus_M_contig641.17335.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig641.17335.1
Unique Nameprot_F-serratus_M_contig641.17335.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length218
Homology
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: D7FXG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG7_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 8.000e-54
Identity = 89/151 (58.94%), Postives = 112/151 (74.17%), Query Frame = 0
Query:    9 EEPRDDYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFG-QLLATCGQDCIVRIWEEHSVSRT---------LRDSP-RWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            ++  D  +T + YDY GRR+A+VSAD V+RIRD+D+NG+W V++GCEIK  H GT+WKVDWAHP FG QLLATC QD  V+IWEEHS +            R +P RW+   +L +SRYG+ DVKFAPRHLGL IA+ASEDG VR+YKA+D
Sbjct:   14 DDQSDSIVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCEIKPAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPARWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATD 164          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: E9HK16_DAPPU (Uncharacterized protein n=3 Tax=Daphnia TaxID=6668 RepID=E9HK16_DAPPU)

HSP 1 Score: 134 bits (336), Expect = 5.050e-34
Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 0
Query:    1 MATTATLSEEPRDDYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEE----HSVSRTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            M    T++ E +D  I  V YD++GRR+AT S+D  +++ D+DEN  W +    +   THAG+VWKV+WAHP+FGQ+LATC  D    IWEE       S   ++   W+   SL +SR  + D+KFAP+H+GL++A  S DG VRIY+A D
Sbjct:    1 MFQARTINAEHKD-LIHDVAYDFYGRRLATCSSDQSVKVFDLDENDEWRLTADWK---THAGSVWKVNWAHPEFGQILATCSFDRTAAIWEEIVGESGNSAQSKNQSHWVKRTSLVDSRTNVTDIKFAPKHMGLLLAMCSADGGVRIYEAPD 148          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A0P5X6F0_9CRUS (Nucleoporin at 44A n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5X6F0_9CRUS)

HSP 1 Score: 133 bits (334), Expect = 9.910e-34
Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 0
Query:    1 MATTATLSEEPRDDYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEE----HSVSRTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            M    T++ E +D  I  V YD++GRR+AT S+D  +++ D+DEN  W      +   THAG+VWKV+WAHP+FGQ+LATC  D    IWEE       S   ++   W+   SL +SR  + D+KFAP+H+GL++A  S DG VRIY+A D
Sbjct:    1 MFQARTINAEHKD-LIHDVAYDFYGRRLATCSSDQSVKVFDLDENDEWRCTADWK---THAGSVWKVNWAHPEFGQILATCSFDRTAAIWEEIVGESGNSTQSKNQSHWVKRTSLVDSRTNVTDIKFAPKHMGLLLAMCSADGGVRIYEAPD 148          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A8J2S7Q8_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S7Q8_9CRUS)

HSP 1 Score: 131 bits (330), Expect = 1.020e-33
Identity = 67/152 (44.08%), Postives = 95/152 (62.50%), Query Frame = 0
Query:    1 MATTATLSEEPRDDYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEE----HSVSRTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            M    T++ E +D  I  V YD++GRR+AT S+D  +++ D+DEN  W +    +   THAG+VWKV+WAHP+FGQ+LATC  D    IWEE       S   ++   W+   SL +SR  + D+KF P+H+GL++A  S DG VRIY+A D
Sbjct:    1 MFQARTINAEHKD-LIHDVAYDFYGRRLATCSSDQSVKVFDLDENDEWRLTADWK---THAGSVWKVNWAHPEFGQILATCSFDRTAAIWEEIVGESGNSSQSKNQSDWVKRTSLVDSRTNVTDIKFGPKHMGLLLAMCSADGGVRIYEAPD 148          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: UPI001CF15CFA (nucleoporin SEH1-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF15CFA)

HSP 1 Score: 132 bits (333), Expect = 1.190e-33
Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEEHSVSR---TLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D I  V YDY GRR+AT S+D  +++ D++ENG W      +   TH+G+VWKV WAHP+FGQ+LA+C  D    +WEE  V      L     W+   SL +SR  + DVKFAP+HLGL +A  S+DG VRIY+A D
Sbjct:   13 DLIHDVSYDYHGRRMATCSSDQSVKVWDLEENGQWICTASWK---THSGSVWKVTWAHPEFGQVLASCSFDRTAAVWEEQVVGTGDGILHGQSHWVKRTSLVDSRTSVTDVKFAPKHLGLRLATCSKDGTVRIYEAPD 147          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A6P8IQV4_ACTTE (nucleoporin SEH1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IQV4_ACTTE)

HSP 1 Score: 130 bits (326), Expect = 1.460e-32
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEEHSV--SRTL-RDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D I  V YD+ GRR+AT S+D  +++ D+ E+G W      +   TH+G+VWKV WAHP+FGQ+LA+C  D  V IWEE  V  + TL      W+  ASL +SR  + DVKFAP HLGL +A  S+DG VRIY+A D
Sbjct:   13 DLIHDVSYDFHGRRMATCSSDQSVKVWDLGEDGEWKCTGNWK---THSGSVWKVTWAHPEFGQVLASCSFDRTVAIWEEQVVGSNHTLTHGQSHWVKRASLVDSRTSVTDVKFAPHHLGLQLATCSKDGTVRIYEAPD 147          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A7S4KT93_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KT93_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 2.810e-32
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEEHSVS--RTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D +  V YDY+G+R+AT S+D  +++ D+DE G W       +   H G V+KVDWAHP+FGQ+LA+C  D  V IWEE  V+  ++ ++S  W  VA   +SR  + DVKFAP+HLGL +A  S DG +RIY+A D
Sbjct:   15 DILHDVSYDYYGKRIATSSSDGQVKVFDLDERGEWYCSS--TLPEGHRGAVFKVDWAHPEFGQVLASCSFDKQVVIWEERPVADKKSDKNSKMWKNVAFFVDSREPVYDVKFAPQHLGLKVATCSGDGNIRIYEAVD 149          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: UPI000C04B30A (nucleoporin SEH1-like isoform X2 n=3 Tax=Pocilloporidae TaxID=46729 RepID=UPI000C04B30A)

HSP 1 Score: 128 bits (322), Expect = 5.220e-32
Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEEHSVSRTLRDSPR---WLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D I  V YDY GRR+AT S+D  +++ D+ E+G W      +   TH+G+VWKV WAHP+FGQ+LA+C  D    +WEE  V      S R   W+   SL +SR  + DVKFAP+HLGL +A  S+DG VRIY+A D
Sbjct:   13 DLIHDVSYDYHGRRMATCSSDQSVKVWDLGEDGQWHCTASWK---THSGSVWKVTWAHPEFGQVLASCSFDRTAAVWEEQVVGSGDGISQRQSHWVKRTSLVDSRTSVTDVKFAPKHLGLQLATCSKDGTVRIYEAPD 147          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A0S7LR14_9TELE (SEH1 n=2 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A0S7LR14_9TELE)

HSP 1 Score: 123 bits (308), Expect = 1.520e-31
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEE--HSVSRTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D I  V YD+ GRR+AT S+D  +++ D  ENG W      +   TH+G+VW+V WAHP+FGQ+LA+C  D    +WEE     +   R    W+   +L +SR  + DVKFAP+H+GL++A  S DG VRIY+A D
Sbjct:   13 DLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWQCTASWK---THSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPD 146          
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Match: A0A7L4JE61_9PASS (SEH1 protein (Fragment) n=2 Tax=Amniota TaxID=32524 RepID=A0A7L4JE61_9PASS)

HSP 1 Score: 123 bits (309), Expect = 1.530e-31
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 0
Query:   14 DYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSVQDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEE--HSVSRTLRDSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASD 148
            D I  V +D+ GRR+AT S+D  +++ D  ENG W      +   TH+G+VW+V WAHP+FGQ+LA+C  D    +WEE     +  LR    W+   +L +SR  + DVKFAP+H+GL++A  S DG VRIY+A D
Sbjct:   13 DLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWK---THSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPD 146          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG7_ECTSI8.000e-5458.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
E9HK16_DAPPU5.050e-3444.74Uncharacterized protein n=3 Tax=Daphnia TaxID=6668... [more]
A0A0P5X6F0_9CRUS9.910e-3444.74Nucleoporin at 44A n=2 Tax=Daphnia magna TaxID=355... [more]
A0A8J2S7Q8_9CRUS1.020e-3344.08Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
UPI001CF15CFA1.190e-3347.83nucleoporin SEH1-like n=1 Tax=Acropora millepora T... [more]
A0A6P8IQV4_ACTTE1.460e-3249.28nucleoporin SEH1-like n=1 Tax=Actinia tenebrosa Ta... [more]
A0A7S4KT93_9EUKA2.810e-3246.72Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
UPI000C04B30A5.220e-3247.83nucleoporin SEH1-like isoform X2 n=3 Tax=Pocillopo... [more]
A0A0S7LR14_9TELE1.520e-3144.53SEH1 n=2 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A... [more]
A0A7L4JE61_9PASS1.530e-3144.53SEH1 protein (Fragment) n=2 Tax=Amniota TaxID=3252... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 104..145
e-value: 0.062
score: 22.4
coord: 4..41
e-value: 4.1
score: 13.2
coord: 51..91
e-value: 0.0063
score: 25.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 59..90
e-value: 0.0063
score: 17.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..171
e-value: 2.5E-34
score: 120.5
IPR037597Nucleoporin Seh1PANTHERPTHR11024:SF3NUCLEOPORIN SEH1coord: 8..153
IPR037363Sec13/Seh1 familyPANTHERPTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERcoord: 8..153
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..154
score: 10.311
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig641contigF-serratus_M_contig641:244638..252016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig641.17335.1mRNA_F-serratus_M_contig641.17335.1Fucus serratus malemRNAF-serratus_M_contig641 244515..253842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig641.17335.1 ID=prot_F-serratus_M_contig641.17335.1|Name=mRNA_F-serratus_M_contig641.17335.1|organism=Fucus serratus male|type=polypeptide|length=218bp
MATTATLSEEPRDDYITCVRYDYFGRRVATVSADAVLRIRDIDENGMWSV
QDGCEIKNTHAGTVWKVDWAHPDFGQLLATCGQDCIVRIWEEHSVSRTLR
DSPRWLCVASLPESRYGICDVKFAPRHLGLIIAAASEDGKVRIYKASDPT
HPSMVSREGLRALPGRFERVEHILVLEPFREAAHRRGHNVWLGPGVGQRW
QRGGARRVGQGRMGQGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037597Nucleoporin_Seh1
IPR037363Sec13/Seh1_fam
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf