mRNA_F-serratus_M_contig641.17333.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig641.17333.1
Unique NamemRNA_F-serratus_M_contig641.17333.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: D7FXG0_ECTSI (ATP-synt_DE_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG0_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 2.070e-72
Identity = 123/149 (82.55%), Postives = 135/149 (90.60%), Query Frame = 1 
Query:    1 SRNFSTAEAPAVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTLA 447
            +R FSTAEAPAVMKLNF LPH+TIYK+K VDQVIIPG+ GEYGVTAGHSPIVAELKPGVVQV+HE GQEPE FFVSAGFALTHPTSVTDITAIEAVRVEE+DE AV+ +YD++KREMDAA  GSRE AEAQVA ET+KAM +AIGV LA
Sbjct:   20 ARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGVVQVVHEAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLA 168
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A6U0LH08_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0LH08_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.010e-42
Identity = 83/149 (55.70%), Postives = 110/149 (73.83%), Query Frame = 1 
Query:    1 SRNFSTAEAP-AVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            SR  STAEA    M LNF LPH+TIY E  V QVI+PGA GEYG+TA H PIVA+LKPGV+Q+MHE G +PEK+FV+ GF+LTH  SVTDI+  EAV+++++D  A+   Y+++K    +A  GS   AEAQ+  E ++AMG+AIG++L
Sbjct:   16 SRCMSTAEASDGSMTLNFSLPHETIYSEAKVSQVIVPGAAGEYGITADHVPIVAQLKPGVLQIMHE-GGDPEKYFVAGGFSLTHENSVTDISCPEAVKLDDIDPTAISSNYEAAKSAFSSAEAGSIAAAEAQIDIEVNRAMGAAIGLSL 163
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A6U3TGR8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TGR8_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.500e-41
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1 
Query:   13 STAEAPAVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            + AEA +VM LNF LPH+TIY    V QVI+PGA GEYGVTA H P+VA+LK GV+Q+MHE   EPEK+FV  GF++TH  SVTDI+  EAV+V+++D AAV   +++++    AA  GS  +AEA V  E  ++MGSA+G+ L
Sbjct:   22 NAAEASSVMTLNFNLPHETIYNGATVSQVIVPGAAGEYGVTADHVPVVAQLKAGVLQIMHESAGEPEKYFVPGGFSITHDNSVTDISCPEAVKVDDIDPAAVSSNFEAARNAYTAAEAGSAAQAEAMVDMEVYRSMGSAVGINL 165
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A836CK87_9STRA (ATP-synt_DE_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK87_9STRA)

HSP 1 Score: 151 bits (382), Expect = 5.090e-41
Identity = 78/149 (52.35%), Postives = 110/149 (73.83%), Query Frame = 1 
Query:    4 RNFSTAEA--PAVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            R+ STAEA  P  + LNF LPH+ IY +K VD VIIPG  G YGVT GHS +++E++PG+V++ HE G EPE +FVSAGFALTHP SVTDITA+EAV+V+++D  AV++ ++ +K ++ AA +  +E   AQ+   T++ MG A+G+ L
Sbjct:   18 RHMSTAEAAKPTGLTLNFCLPHKPIYVDKAVDTVIIPGVAGVYGVTQGHSAVISEMQPGLVKIYHEAGGEPENWFVSAGFALTHPNSVTDITAVEAVKVDDMDPEAVKDTFNQAKSDL-AAASDEKERVAAQIQMSTAQVMGQALGLNL 165
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A7S2PKN7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKN7_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.380e-40
Identity = 81/150 (54.00%), Postives = 107/150 (71.33%), Query Frame = 1 
Query:    1 SRNFSTAEAP-AVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTLA 447
            S+ F ++EA  + M LNF LPH+TIY    V QVI+PGA GEYGVTA H P+VA+LK GV+Q++HE G +PEKFFV  GF+LTH  S TDIT  EAV+ +++D A V   Y+++K    +A +GS  +AEAQ+  E  +AMG AIG+TLA
Sbjct:   24 SKAFLSSEAGGSTMTLNFNLPHETIYAGAPVKQVIVPGAAGEYGVTADHVPLVAQLKAGVLQIIHEDGGDPEKFFVPGGFSLTHENSTTDITCPEAVKFDDIDGAVVSSEYEAAKAAFGSAEDGSVAKAEAQIDMEVYRAMGGAIGITLA 173
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A7S1DDA2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDA2_CYCTE)

HSP 1 Score: 147 bits (372), Expect = 3.040e-39
Identity = 79/150 (52.67%), Postives = 110/150 (73.33%), Query Frame = 1 
Query:    1 SRNFSTAEAPAVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQ-EPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTLA 447
            +R  S+  +   +KLNF LPH+TIY    V QVIIPG+EGEYGV A H P +++LK GV+Q++HE G  EPEK+FVS GFALTH TS+T+I+  EAV+++++D AAV +++D +K    +A  GS  +AEAQ+A E SK+MG A+G+ LA
Sbjct:   41 ARWMSSEASSGKIKLNFSLPHETIYSGVEVAQVIIPGSEGEYGVAANHVPYISQLKAGVLQIIHEDGAGEPEKYFVSGGFALTHETSLTEISCPEAVKLDDIDSAAVSKSFDEAKAAYASAEAGSIAQAEAQIAMEVSKSMGMAVGLMLA 190
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A7R9U2Q0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Q0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.150e-38
Identity = 78/141 (55.32%), Postives = 103/141 (73.05%), Query Frame = 1 
Query:   22 EAPAVMKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            EA   +KLN   P +TIY +KVVD VI+PGA+GEYGVTAGHSPIVAELK GVVQV+H+   + EKFFVS GFAL+H    TDI+A E  R+E+LDE A+R  +  +  ++ +A + + + AEAQ+  ET KAMG+A+G+ L
Sbjct:   55 EAAEGLKLNLASPSETIYSKKVVDSVIVPGADGEYGVTAGHSPIVAELKAGVVQVLHKGSADAEKFFVSGGFALSHEDDTTDISAPEIARLEDLDENAIRTGFADATTKLSSAGDETAK-AEAQIEMETFKAMGAALGIAL 194
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A4D9CR36_9STRA (ATP-synt_DE_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR36_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.630e-38
Identity = 72/134 (53.73%), Postives = 96/134 (71.64%), Query Frame = 1 
Query:   43 LNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            LNF LP  +IY+ K V  V+IPG  GEYGVT  HSP++AELK GVVQ++HE GQ PEKFFVS GFALTH  SVTDI  +EA ++E++D   V + Y  + ++ +AA  GS+E+ EAQ+  E +K++  A+GV L
Sbjct:   40 LNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHETGQAPEKFFVSGGFALTHANSVTDIAVVEAAKLEDIDAEEVPKIYAEAMKDYNAAAEGSKEKVEAQIEVEVAKSLAGALGVAL 173
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A7S1UY04_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY04_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.520e-36
Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 1 
Query:    1 SRNFST-AEAPAV--MKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            +R FS+ A APA   M LNF LP +T+Y    VDQVI+PG  GEYG+TA H PIV+ELK GV+Q++H  G EPEK+FVS GFALTH  S TDI+   AV++++LD +AV   YD++K    +A  GS  +AEAQ+  + +K+MGSA+G+ L
Sbjct:   15 ARAFSSEAAAPASGKMTLNFSLPDETVYAGAEVDQVIVPGEAGEYGITANHVPIVSELKAGVLQILHGDG-EPEKYFVSGGFALTHDDSSTDISCPVAVKLDDLDSSAVSSNYDAAKSAFASAEAGSIAQAEAQIEMDVNKSMGSALGLNL 164
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BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Match: A0A1E7FRF1_9STRA (Epsilon subunit of F1F0-ATP synthase N-terminal domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRF1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.480e-36
Identity = 74/150 (49.33%), Postives = 106/150 (70.67%), Query Frame = 1 
Query:    1 SRNFSTAEAPAV--MKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQVMHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDSSKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTL 444
            +R FS+    A   + LNF +P+++IY    V+QVIIPG EGEYGVTA H P VA++KPG++ VM +   E EK+FV+ G+A+TH  SVTD+  +EAV+V++LD + V   Y+++K    +A  GS+EEAEAQ+  E +K MG+A+GVTL
Sbjct:   27 ARTFSSESEAAASSVSLNFSVPYESIYNGASVEQVIIPGVEGEYGVTANHVPYVAQMKPGILTVMFD-SSESEKYFVAGGYAVTHANSVTDVVCVEAVKVDDLDVSVVSANYEAAKSAAGSATAGSQEEAEAQIDMEVNKTMGAALGVTL 175
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG0_ECTSI2.070e-7282.55ATP-synt_DE_N domain-containing protein n=1 Tax=Ec... [more]
A0A6U0LH08_9STRA6.010e-4255.70Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6U3TGR8_9STRA2.500e-4154.17Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A836CK87_9STRA5.090e-4152.35ATP-synt_DE_N domain-containing protein n=1 Tax=Tr... [more]
A0A7S2PKN7_9STRA2.380e-4054.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1DDA2_CYCTE3.040e-3952.67Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9U2Q0_9STRA5.150e-3855.32Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CR36_9STRA5.630e-3853.73ATP-synt_DE_N domain-containing protein n=2 Tax=Mo... [more]
A0A7S1UY04_9STRA2.520e-3652.98Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7FRF1_9STRA3.480e-3649.33Epsilon subunit of F1F0-ATP synthase N-terminal do... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig641contigF-serratus_M_contig641:215339..221194 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.5
Seed ortholog evalue9.4e-55
Seed eggNOG ortholog2880.D7FXG0
Preferred nameATP5D
KEGG koko:K02112,ko:K02114,ko:K02134,ko:K14573
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03008,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03008,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
Hectar predicted targeting categoryother localisation
GOsGO:0000275,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005756,GO:0005759,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042407,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0044877,GO:0045259,GO:0045261,GO:0045269,GO:0046034,GO:0046390,GO:0046483,GO:0046688,GO:0046907,GO:0046933,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0055086,GO:0061024,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.proton-transporting ATP synthase activity, rotational mechanism
EggNOG OGsCOG0355@1,KOG1758@2759
Ec32 ortholog descriptionATPase, F1 complex, delta/epsilon subunit
Ec32 orthologEc-07_003070.1
EC3.6.3.14
COG Functional cat.C
BiGG ReactioniMM904.YDL004W,iND750.YDL004W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000,ko03009
Exons4
Model size1151
Cds size414
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig641.17333.1prot_F-serratus_M_contig641.17333.1Fucus serratus malepolypeptideF-serratus_M_contig641 215375..220493 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931982.650166-UTR-F-serratus_M_contig641:215338..2153741622931982.650166-UTR-F-serratus_M_contig641:215338..215374Fucus serratus maleUTRF-serratus_M_contig641 215339..215374 +
1690964088.2870855-UTR-F-serratus_M_contig641:215338..2153741690964088.2870855-UTR-F-serratus_M_contig641:215338..215374Fucus serratus maleUTRF-serratus_M_contig641 215339..215374 +
1622931982.737053-UTR-F-serratus_M_contig641:220493..2211941622931982.737053-UTR-F-serratus_M_contig641:220493..221194Fucus serratus maleUTRF-serratus_M_contig641 220494..221194 +
1690964088.3582523-UTR-F-serratus_M_contig641:220493..2211941690964088.3582523-UTR-F-serratus_M_contig641:220493..221194Fucus serratus maleUTRF-serratus_M_contig641 220494..221194 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931982.6724746-CDS-F-serratus_M_contig641:215374..2154341622931982.6724746-CDS-F-serratus_M_contig641:215374..215434Fucus serratus maleCDSF-serratus_M_contig641 215375..215434 +
1690964088.30161-CDS-F-serratus_M_contig641:215374..2154341690964088.30161-CDS-F-serratus_M_contig641:215374..215434Fucus serratus maleCDSF-serratus_M_contig641 215375..215434 +
1622931982.6936512-CDS-F-serratus_M_contig641:218879..2189811622931982.6936512-CDS-F-serratus_M_contig641:218879..218981Fucus serratus maleCDSF-serratus_M_contig641 218880..218981 +
1690964088.3114913-CDS-F-serratus_M_contig641:218879..2189811690964088.3114913-CDS-F-serratus_M_contig641:218879..218981Fucus serratus maleCDSF-serratus_M_contig641 218880..218981 +
1622931982.7096906-CDS-F-serratus_M_contig641:219211..2193281622931982.7096906-CDS-F-serratus_M_contig641:219211..219328Fucus serratus maleCDSF-serratus_M_contig641 219212..219328 +
1690964088.3275564-CDS-F-serratus_M_contig641:219211..2193281690964088.3275564-CDS-F-serratus_M_contig641:219211..219328Fucus serratus maleCDSF-serratus_M_contig641 219212..219328 +
1622931982.7223356-CDS-F-serratus_M_contig641:220358..2204931622931982.7223356-CDS-F-serratus_M_contig641:220358..220493Fucus serratus maleCDSF-serratus_M_contig641 220359..220493 +
1690964088.3467917-CDS-F-serratus_M_contig641:220358..2204931690964088.3467917-CDS-F-serratus_M_contig641:220358..220493Fucus serratus maleCDSF-serratus_M_contig641 220359..220493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig641.17333.1

>prot_F-serratus_M_contig641.17333.1 ID=prot_F-serratus_M_contig641.17333.1|Name=mRNA_F-serratus_M_contig641.17333.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MKLNFGLPHQTIYKEKVVDQVIIPGAEGEYGVTAGHSPIVAELKPGVVQV
MHEPGQEPEKFFVSAGFALTHPTSVTDITAIEAVRVEELDEAAVREAYDS
SKREMDAAPNGSREEAEAQVAFETSKAMGSAIGVTLA*
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mRNA from alignment at F-serratus_M_contig641:215339..221194+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig641.17333.1 ID=mRNA_F-serratus_M_contig641.17333.1|Name=mRNA_F-serratus_M_contig641.17333.1|organism=Fucus serratus male|type=mRNA|length=5856bp|location=Sequence derived from alignment at F-serratus_M_contig641:215339..221194+ (Fucus serratus male)
TCCAGGAACTTCTCGACTGCAGAGGCACCCGCGGTCATGAAGCTTAACTT
CGGCCTCCCTCACCAGACCATTTACAAAGAAAAGGTGGTTGACCAGGTGC
GCGCCTTATTCGAAGTTGGCTCCGCCTATTGTGCAACCGGAGGTGCTGCC
TGCGTTAGAGGTTCACGAGACAGAAAATAGAAAATACCCTACGAAAATAC
GGTACACAAGAATGCACAGATAACCGCACTACAGCCTAGGTCCAGATGTA
CTGGTAGACATTTACTCGTGCAATCAGGACGAGTATAGAGCCTACCAGGT
ATGTCTATATCAGCCTAAGTATAGAGATGAGCAGGCTGACGCGGGACGGG
ATTGCCGTAACCGTCTCGCGAGACCAAATTCTCAGGCACGAACGCGGACA
GGGGAATATTTTTCCCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACC
TTATCCGGTTGATCCATACTCTTGCTATATGTGTGACCATACATAGAGCC
TACCTGGTATAGTATTAATGTACCGCACGTCTTATCTACTCCGATATACG
TGAAATGGTCCATGCATGGAGTCTATTGTACATAAAAATCTGAACACGCA
TCTAAACCTTACCTTCTGAGAGCATTATCCCTCAGGGGGGAAAATTGTCA
AAACGATCAGGTCGAGACTTTGGCTGCAAAAGCAAAAACTGTCTTTGTGA
TTTACCTGGTAAGGCAGCACCCGTTACTGTCTGTGTAGCTATCTTGAGGA
CTTCTTGCCTTTTACTGTGCCGGGGAACTCTCGGTGGCGAATGCCATCTG
AACGCAGTTTCCGTGACCTGGCAAACTCGGGACTGAACCGATGGCGTATG
GCGGTTGACGGTATTGATGGATGCCTTACTATAGTCTATAGTCTTTAGTC
GCGGAAAGCGGGAGGAAGGAGAGCAGCCCGCGAGTAAGCACCAGATTCAG
CCTGGGTGTGGAGAATCAGCGAGCTGACGTGGGACAGGACGGCCGAACCC
GTCTCGCGAGACCAAATTATCAGGCGCGAACGGAGCAGGGAAAAGTTTAA
ATGTCATTATTCCTGTTTGAGCTGACCACGAGCCGTAGGATTGGCAACCT
TGCCCCGTCGATCAATTCTCTGTTATAAGAAAGTGATGACTAGTCTACAT
ACTGCACAACAGGAGCTACAGGAGTGCTGGAGTTTTTGTATCTCCGGCAG
TATGTAAAACCTGGTACAATAGTGGTACCTCTTGGGCTTTTTACAGTTTC
GACATAAAGTAGTTTGAGGAGGTCAATATACTAAACTACAGTACAAAAGA
GATAAGGGGTACCACACGTTCGGTTTTGGGTTTCGACGAAGGCGTTTCGC
CACTCCTTGTTTCTGTACAACTTGTGATGTTGTGTTCTAACCCTACTGCA
TCCTGGAATCATATCCACGATTGCTTGGGCGGGGGTGCTCTTCGCATGCC
ATGGAAACGTTTCGCGCACCGGGTACGATGCCTGAAAAGGACCCTTCCAT
CATGAGCGACAAGGGAGTTACAGAAAGTACTCGAGGCCGAGTTCTGCCCC
CCCCCCCCCTCCCCCTTCTACGTAACAAGTTGTAATGTTGTGTTCTAACC
ATGCTTTATCCTGGAATCATATCCACGATTGCTTGGGCGGAGGTGCTCTC
CGCGTGCCATGGAAACGTTTCTCGCACTGGGTACGATGCCTGAAAAAGAC
CCTTCGATTATGAGCAACAAGGGAGTTCCAGAGAGTACTCTAGGCCGAGT
CCTGCCCCCCCTTCCCCTCGCTATGACGTAGGCTGGTAATCCTTTTGTCA
GAATACAATCCAACACTATTTTTTGTTTGTGCCTCACTTACGGCCGATGA
TTAAGGGCCTCAACGTGCTAAAAATAGAGATTACCTATTCCACGTATTGC
GACGTTGCCGTCCTGACTGTGGTCACCAAGGATCTTCCCATCTCTCCCCG
GTTCTCGCGTACGATTTTTTATCGAGATGCAAGTTTAGCACTCTATCACG
TCGCCAACCGAGGGTTGGATTGTATTCACTCACGTTCTCACGCTTGCCGC
TACGGAAGCCATAATAAAAGAACGATCCTGTCGAGAATGGAACTCCCGAA
TCCCCACTATTATTAGTGAACCTACGAGGTTATCCACTACACCGTCATAC
TCCATTCAGGCAACCGTAGCAGCTCCCCGAAACCAAACCTTGTTTTTCAC
AAAGCCTGGATGGAAAGCGAAAAAAATCTTGCGGCGGGGTAACTCCGAGC
ATTTCGTCGTGCATGACCCCTGTACGTAGCTCGCGTGTCTTCGAAATCTC
GACAAGCACAAAAATAAGCATTCGAATGTAGAGAATATACTAGGGTGTTG
CCACGGAGACTACTGTAACTGGGGTCAGCCTGGGTTTGGAGAATGAGCAA
ACTTTAGAGGGTACAGCCGGGCCTGTTTCGCGAGACCAAACCTCAAGGGA
ATGACTGTTCTCCCTGCTCAGCTAGCCATAACCAGAAGTAGGATTGGTAA
CCGTAACCGTTTGGTTCCCGATCTTTACAAGTGACTAGACACACTCATCA
GGTGTTCAAATATGCTCCTGTACCTGCTGAGAAAAATGTCAAGGCGCTTG
AAATGCTGCAGAGTGTGTCAATACCATTCTACCGTGGGCGATGCCCGCCT
GGAGTAGGTTGTTTCTTGGTGCTCCCACCCTTGATGTGTGGAGATACCGA
CCGCGAATGCCGTGATGCGCGCTGGTTGCCATCCTTAACGTATGGAGATA
CCGACCGCAAATGCCATGATGCGCGCTGGTGGCCACCCTTAACGTATGGG
GATACCGACCGCAAATGTCGTGATGCTCGCTGGTGGCTGCACCGGCGCGT
GTATTCTTCGAGCAAATACAAACGCCGCCGACTTTTTAGATGATCTGGTT
CATTTGCCCTCTAACATCTTCCACCATTATTTCCGCCGCATAAAATAAAT
AAATAATCTTAGTCATGCCGACCTGAAACTAACTGTGCTAGTAGCGTGGC
GGTGTCCAAGCGATATCTACCCCAAAGGACATTCCCCCCCCCCCTGACTG
GGGAATGCTCAGAATGTCTAGTCGCGTTCTGATTTTTATTTAAACACCTT
GTATATCCACGCTTGCGTTGTGGTGAAGTGCAGCGCATCCGACCTACAAC
CTGCCGACGGATCTCTTTTTCGTGGGGCGCCAGGCCTTGCCGTCTTCCAA
AACGTTCTGACGAGGGACATCACACCGATCGTACCGGCCTAGCAAAAGAT
GCGACACAAAAGTATTGTAAAGCGGGGACTACAGGTCTATATATAGACGC
TCGAATCATATGGCTATAGTGCGCATCCACTCTTTCGCAAAGCTCGCTGA
GTTCATGTTTTTTCTGCTTCGCGCAACACCCGTAAGAGTGCGCCATGGCG
TGGGAAAGCAGCAAGGTACTGGGATGAATACCAGCCGCACCTGGACCCTC
TCCTACCCCTGGTTGGTTCATTCTCAACAGACAAATACGTCTCTTCCCGA
GATAGCTTAACTCATGCCCCTTTTCTTTCGTGCTTGTGCAGGTGATCATC
CCGGGCGCCGAGGGCGAATACGGCGTTACCGCAGGCCACTCACCGATCGT
CGCCGAGCTCAAGCCGGGGGTGGTTCAGGTCATGCACGAGCCGGTACGTC
GGCGCGCTTCGGTGCACACCTTCGGGTTTCACAGTTGTAAAAGGGCGTTT
TTTTGTGCTGCGCGCCCCAAGACAGCGCCGTTTTGGCGGGTCAGCCCTCG
GTTTGATTCGAGCGCTTGAATGAAATATCGCAAAAAAAAATCCCCCAGAA
GAGCTGGTTTATTTATAAGGTGTGTGATTGGTCGTTCTTCCTCCCTGCGA
CCCTTCTGTCGTCGGATAAACAGGGACAGGAGCCAGAGAAGTTTTTCGTC
TCCGCTGGATTCGCTCTCACCCACCCGACTTCGGTGACGGATATCACCGC
CATCGAGGCGGTTAGGGTCGAGGAGCTCGACGAGGCAGCGGTAAGGATCT
TCCTTTTGATGGACGCTTTATGGCGTTGGGCACCGCCGGCGAACGAGCCT
CCCGCGTCCATAATTTCTGCCGAGATTTTCAGTATGAGGTTTTTTGAAAG
ATGTCGTAAATTTGGTTTCTATCCTGATCATCATTTAATGTTGTCAAAGT
TGTGTCGTGTCGCGTCGGTGTCCACTACTGTTGTGTTGCACTTTCCTCGC
CTTCTATACAGCATCTATGTTTGTATGAATGCATGTATGGGTCACACGTA
TAGCAAGAGAATGGATCAACCGGGTAAGGTTGCTAATCCTGCTCGTGGTC
AGCTAAACAGGGAAACATAATATTTTCCTGTCCGCATTCTCACCTGAGAA
TTTGGTCGCGCGAGCCGGGTTCGGCAGTCCGGTCCTGCGTCAGCCTGCTC
ATCTCCATACCCAGGCTGAATCTGGCGCTTACTTACGGGATTCCTCCCGA
GTTCCGCGGCGGCGTCCATTTCTTAATTCAAAACCGCCATACACCTATCG
GACCAGTTCCGAGTTTATCGGGTCACGCAATTGCGTCCCGATCGCGTTCA
CTGCCGAGAGTCCGCCGGCACAGGACCAGTAAACTCCAAGGTAGTTCCGA
ACGAGTGCTGCCTTGGCAGGTCATCATGGACCAATTAATATGCGCCACTC
TTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGGTATATATAAAT
ATAATGAGCCTAAGTAGCAACTGTTCACTAAAAATCGATTACTAAAGGTC
TACATGTACCATACAGTATAAATAGCTTGAATAACAAACGTTCACTGAAA
ATCGAATCCTCTATATTGATGTACATATAATAATTATTATATATTTTGGC
CTCTAGTATTCGAGTTTTAGAAAATTACATATTCCTGCCTAAGTATTCAA
TTTTTCGTTTAGAACGTTTGTTACGTAAGCGCAAGTTTATCGTACCTCAT
CACGTAAACTTCGGCTGTTTTAAGTGGACGTGTGTTTTTTTGTGTGGGGA
CGCATCACACGGCCGCGTAGGTGAGAGAGGCGTACGACTCTTCAAAGCGC
GAAATGGATGCAGCGCCAAACGGGTCCCGCGAGGAAGCCGAGGCGCAAGT
GGCCTTCGAGACCAGCAAAGCCATGGGGTCGGCCATCGGTGTTACGCTCG
CCTGAGCACGGGCAGCGCTTCCAAGCCCTCCTTTTGGAGCGACGACCGAA
AGGGTTGCGGTCCTTTGAGCCGTGCGTCAGCTTCCGCCTTTGAAGAACGC
CACACTCTATAGGACTGACTTGGGCAATTATGAGGGTTTTGGGTTGGATT
GGGGGGGGGGGGGGGGCATGATCGACACAAGAGGGTTATGTGTAACTATA
TTGAAACTAATGCAAAGCGACGATGCATTTTCACATGTCGATGCCGTGGC
AGGCAATCCATGTTCGGCGGCGGCGTTTTCCCGTCGATGTTACAGGAAAC
TTGAAATCTGCGATGTTTTGTGCTTGGGGATCCTTTAAACCCTGCCACGA
TACGGACTTGAGCCATCAGTCGTTTCAGCGTCGAGGGCACACGCGCGCAA
GCTCAGGTCGATCGAGGGGTCTCCACGAATCCTCGACAGTCGCGATCGTG
TTTGTGAGCGGAAATGAAGGTGCTGCGACGTACACAAATTTAATTCGCGT
ACGCAGCGTGTTTTTTTACCCCCCGTTACCAAGGGTGCTCCTGTCGGCTG
CTAACAACCCCCTCCCCAAAACAAATAATCAAACAAACCAAGCTATGAAA
TGTATAAATTGGCGTTGTATCGCTGACCATCCGCTGTTCTGGCGTCGGTT
TGCGGTTGAATCAGGTAGAACACGGACTTCGAATGCCTAAAAATATTTGT
CGGGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig641:215339..221194+

>mRNA_F-serratus_M_contig641.17333.1 ID=mRNA_F-serratus_M_contig641.17333.1|Name=mRNA_F-serratus_M_contig641.17333.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig641:215339..221194+ (Fucus serratus male)
ATGAAGCTTAACTTCGGCCTCCCTCACCAGACCATTTACAAAGAAAAGGT
GGTTGACCAGATGAAGCTTAACTTCGGCCTCCCTCACCAGACCATTTACA
AAGAAAAGGTGGTTGACCAGGTGATCATCCCGGGCGCCGAGGGCGAATAC
GGCGTTACCGCAGGCCACTCACCGATCGTCGCCGAGCTCAAGCCGGGGGT
GGTTCAGGTCATGCACGAGCCGGTGATCATCCCGGGCGCCGAGGGCGAAT
ACGGCGTTACCGCAGGCCACTCACCGATCGTCGCCGAGCTCAAGCCGGGG
GTGGTTCAGGTCATGCACGAGCCGGGACAGGAGCCAGAGAAGTTTTTCGT
CTCCGCTGGATTCGCTCTCACCCACCCGACTTCGGTGACGGATATCACCG
CCATCGAGGCGGTTAGGGTCGAGGAGCTCGACGAGGCAGCGGGACAGGAG
CCAGAGAAGTTTTTCGTCTCCGCTGGATTCGCTCTCACCCACCCGACTTC
GGTGACGGATATCACCGCCATCGAGGCGGTTAGGGTCGAGGAGCTCGACG
AGGCAGCGGTGAGAGAGGCGTACGACTCTTCAAAGCGCGAAATGGATGCA
GCGCCAAACGGGTCCCGCGAGGAAGCCGAGGCGCAAGTGGCCTTCGAGAC
CAGCAAAGCCATGGGGTCGGCCATCGGTGTTACGCTCGCCTGAGTGAGAG
AGGCGTACGACTCTTCAAAGCGCGAAATGGATGCAGCGCCAAACGGGTCC
CGCGAGGAAGCCGAGGCGCAAGTGGCCTTCGAGACCAGCAAAGCCATGGG
GTCGGCCATCGGTGTTACGCTCGCCTGA
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