prot_F-serratus_M_contig641.17328.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig641.17328.1
Unique Nameprot_F-serratus_M_contig641.17328.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length2272
Homology
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0
Identity = 1001/2131 (46.97%), Postives = 1139/2131 (53.45%), Query Frame = 0
Query:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAPNSHDLVVAKASILELYRVHRDPSPSSPTGVGGVSPQGDASTGA-----GAGYFLELVGTFPIAGNITALAVIPVERSTAPSTQQQRDILVVSFDFAKTALVAYDSTLGRMSTLSIHNFDPDAIGPGSGGVEPSYGLASALKDRPSTIYSCDPAGRCLSAVVAGCLLVVLPTLRHVPPTVFLSEEAKKRVLLPRRHGRRRNPEVQNDNADLEVEGAAVVEATEAAVEGANQDRSNGKGLRDDYGGXXXXXXXXXXXXXEAEQDAG---GAFAFDDSRASRVRPTVSKPFTLDLEAVGVTGFIKAAVFLEGFHEPALALLYEPIQTCPGRLASMRSTCRLLLLSLNLVQGRAPVIWRVDNLPHDSWDLVAVPAPFGGVQVISTNAVIHVNDSEVLSILAVNGYARATVEDALLGCPLRASSGDWDWASFRHSRSALEVVDLSSYDVCVELDVMSCAFVTPTSMLLSLKGGEVYALRLHVSP-------GLGCG------VLGASGRVVGQSMRPIGRATPCSALAVSARGSDGGGSDGDGDSAGPSTGLVFMGSRVGDSLLVDYEVAMCGARSGGRGGSTAAVAAKHEPKEEAGGAVRARTIAEERRGEVGEAPVQAGEGARSPXXXXXXXXXX----------------------------TSGGAEXVXXXXXXSALPGGASRSLGGDDGN--DDADVSGREKSEGRTLARGGADSGKGNAGETHSSAVASAMETETRPSEERGAPEGSAAGMEAATDGSSKDSDPRVEESDAEGQRKKRVRDEALRERSGSGAQEKMVGVDGGEGGEEANGAAEPPRKGKKLCVSTSETKLAAPKIESEEAGSERTVVVSATPGTGSHDDRDESMNDASLPLTGSTRLSDA---GTSPAEEKGRQQKGAAA---ATTAEHALRGEGNPSTVGVVWDRKPSSSTQGPSVSSSRDNKVPLEDRETIAEEEELYGTVLGTEP-EGAGGGGRE--LSRLGSRYGERVVEAVGFRLKVVDSLCTLGPIVDAALVPSAYHVPRAAIAPGXXXXXXXXXXXXXXXXARGGKGGRTRSPSPLPXXXXPPLERGTSGGGIRTTLVCAAGYGQQGSLAVFSAGLRTEVVVDLAVPGATGVFAAPEGVIGEGESRGDTLVLVSSSPLIEQRASAGXXXXXXXXXXXXKADGKGHTRVLAFEDDLRVVELVPESDGNPFVCDAATVDLCAMAGSTIVQAHAQGLRVTRRREFVQEVLAAEDREMDGLGAGPDVTVLKAAAAGAFACCLLSNSYLHLMALEAGEPEEADLMPVGVWEEDDSKADNGGGSSAEGVWTDVEAMCMFGVRPSGARGFATAGPSAEQ----TKGWWGGDAWGEDLYSSSGDGACGGCEQTAST------------YLVVCRKEGALEIHACQGRGKEAT-TRTVFRASKAVLAPSTLWNELLLVPSPTAPYLSESESDLEALSLTANGDAVPPGGDDAGVGDDRRWSSPTGDDGXXXXXXXXXXXXVATGVVAADGRRLERAAASNGSASSRSIGRETAA-HSEPMEVE-------SPRRDTTRTPGANLAP----EGGGGDEDD----------GVVCPAVSDVLVHPVGAVDGPSALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPL------EEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE-----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAVKLRQVFAKEQLGPIAGESG---PVSAISQLGWHLIL 2018
            MTSTAIYTCYRQLHPPTGVDHAVFGSVTA  S DLVVAKAS LELYRVHRD                            +GY+LEL GTFP+AGNITALAVIP             DILVVSF  AK ALVAYDS LGR+ T+SIHNFD  AIGPG+GGVE  YGLA+ALKDRP TI S DPAGRCL+AVVAGC LVVLP  RHVP +VF+SEEAK+                                A E+A  G                 XXXX         E E+D G   GA A  D  A      VSKPFT+DLE  G+TGFIKAA FLEGFHEPALALLYEPIQTC GRLAS RSTCRL LLS+NL QGRAPVIW+V+NLPHDSWDLV VP+P GG+QVISTNAV+HVN SEV SILAVNGYARATV+ ALL CPLR    DW W SFR S    EVVDLSSYDVC+ELDV+ CAF+TPTSMLLSL+ GEVYALRLH++          GC         G   RVVGQSMRP+GRA+PCS LAV+                  S GLVFMGSRVGDSLLVDY VA  G R GG+G    A   K EPK E                                XXXXXXXXXX                            T  G +              ++RS GGD      DAD  G+  SE    + GGA+             +A      T P  E G             DGS         + +AE        D+   E +G G         G  GG    G AE P  G  +    ++           +   +R+ V +   G     + D + +  ++P T  T  + A   G +PA      ++GA A      A       G P+      D  P                             +LYG  +G    EGA G G E  L+RLGS+ GERV+EAVGFRLKVVDS+CTLGPIVDAALVPSAYHVP+     GXXXXXXXXXXXXXXXX                XXXX          GIRT+LVCAAGYG QGSLAVFSAGLRTEVVV+L+VPGATGV+++ EG                            XXXXXXX          GHTRVLAFE+D +VVEL PE DGNPFVCDAAT D+C+MAG T+VQAH QGLRVTR R+ VQ+VLA+ED ++ GLGA   VTVL+AAAAG+ ACCLLSN  LHLMAL+ G     DLMPVG  EE   + + GGG     VW +VEA+CMFGV+  G+ G  +     E+     KGWWGG AWGE   S S   A G   + A +            Y+VVCR+ G +E+ +C+G G E T  R VFRA+ A LAP TLWNELLL                                                   XXXXXXXXXX  VATG++ A+GRR              + G  TAA  S+PMEV+       S   D + +  A  AP    E  G D              VVCPAV+DV+VHPVGAV GP  LRRL+L MHLDNG LLVY+ARM       A  GGREQV+CFSKLSHDLITRPVKGVPPEAA+ DP RGRALRGVRSA GQEG+CFARPGCRSAL                                                                                               GHFVA K+ LGATVHG++HLPH+LA  GK GDILK LL  RGHY  LVS MED L  QP       EE EQ DGD       E  G L RH VKHKNWTVADP+LGGAP LLV RFELRVLALAPG  +A                             +   S GRG    DG   SVPG      +LSA+ VE+HP D+DEN +CM+LVRLEQGG PRM+VAVGTGMN+ QGEDKAARGRLIL EVDYAYLA+EDG HEHAVKLRQVFAKEQLGP++GE     P S      +HL+L
Sbjct:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP-------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXX---------XXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXX--XXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGG-NLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXX-----XXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKG----AAVPKREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAGDADADGKP-SEITETSGGGAE-------------IADGPGAVTSPPIENG------------NDGSPDPPAATPTKQEAEALSSSPQPDDG--EEAGEGKDA------GSRGGSAKRGRAERPSSGGDVGAGDNDG----------QPDKKRSRVSACADG-----EDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAADAAIDPTPXXXXXX------XXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRA-----GHTRVLAFEEDAKVVEL-PEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDG-----DLMPVGSVEEAGEEGEGGGG-----VWEEVEAVCMFGVQKGGSVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGSEPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXLAVATGIILANGRRGAAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAGXXXXXXXXXXXSVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSP--LAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSAL-----------------------------------------------------------------------------------------------GHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXX--EAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXTPEEGEGRRSGGRG---QDG---SVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGEWSIFFPFSTSLPEVFHLVL 1899          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 2.240e-138
Identity = 212/245 (86.53%), Postives = 232/245 (94.69%), Query Frame = 0
Query: 2027 NRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLASLF 2271
            +RWDPKT TLELIGF+D RVYV+ LSVIK++FILVGDAYGSVQLVVWRE+DH+LT LSKDHE C+VF+AEYL+DEPGM IVVADGRRN+KVLQYAP A NSRGGT LLCQSDF+LGSRV KLTRRRTRGNLR GARYCLLAGTLDGGLGA+LPVDER+FRRLYALQGIMSNALGH G+ANPRAYRLFD GPTFRYETKQNMLDG+LLWRFVGLDA+TQ+DLTRAIGTTV+RVM+NLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.390e-67
Identity = 116/268 (43.28%), Postives = 171/268 (63.81%), Query Frame = 0
Query: 2003 SGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLF----DRGPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDID 2266
            +GPV A++Q+  ++  +    + +  WDPK+ +L  +G Y+A  YV+ +SV+K  F+++GD   SVQ ++WR++D ++ QL+KD+E  +V+A  +LVD+P +GIVV D   N+K+L+YAP+   SRGG  L+C +DF +G+ V     +R R N     R+    G LDG +  + P++ER FRRLYALQG+M NAL H    NPR  RLF               + +LDG LLWRFV L A+ Q +LTRAIGTTV+ V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVKT-FLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.100e-62
Identity = 237/799 (29.66%), Postives = 370/799 (46.31%), Query Frame = 0
Query: 1527 VSDVLVHPVGAVDGPSALR---RLILVMHLDNGDLLVYQARMTSREGGSAR--GGGREQVICFSKLSHDLITRPVKGVPPEAAV---------PDPSRGRALRGVRSA-----------VGQEGICFARPGCRSALILAERG-----AVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRT-------RGNLRGGAR---YCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFR---------YETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 2269
            V+D+++H VG  +G    +   R+++++ L NGDLL+Y A  T + G  +R  GG    V  F ++  DLITRP   +PP A           P+ +    L  +R+            V      F R G     IL++RG      +CV   +     +G+G   +PP A      V + S  P +  N  P G     + G   LR      +    + P +SGG          FV  K E GAT+H +L+L +    PG + + L++       YAV+ S KM+   AE+  E EE ++    + VD   + P+  + +        +  L          +ELR++                                    + ++ G  GR G+        V  E    VLS   +  +     +  +  +    E     R ++ +GTG     GED++ RGRL+L+E+DYA   KE+GG       KLR VF KE         G +S ++QLG +++ +VG K+IV  ++ K+  L    FYDA+++++ LSV+++ F++ GD + SV  + W+E    LT L+KD+E   V   E+ V E  + ++  D   NL V+Q+AP+   SRGG  LL  SDF LG +VA + R+R        R N R  A    Y  + G  +GG+GA++PV ER+FRRL+ LQ +M N L    + NPR +R+       R         ++ K++ LD  +L+RF+ LD   Q +L R IGTT E V+ NLL++  A+
Sbjct: 1065 VADIVIHRVGPSEGQHNAQYFARMVMLVFLANGDLLMYAA--TPKPGSKSRNAGGTSAPVFQFVRVGTDLITRPF--LPPRARTNAHHETGNNPEANTSAILAKLRAGFRYPMLTCFDNVNNMSGAFFR-GAHPMWILSDRGHPSFIPMCVAGSSPPPRANGNG---VPPKANVPKVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVSEALEAPT-----YAVVCSVKMKPADAERATENEEGEEEQEPENVDANGQ-PIGSNVMAPTAEMFPELELEQMANTEEDVYELRLV------------------------------------QTNEFGDWGRNGV------FRVHFERYEVVLSVKLMYLYDSSLMKEEVASNSP--EWNKKKRPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN)

HSP 1 Score: 241 bits (614), Expect = 4.940e-60
Identity = 238/803 (29.64%), Postives = 357/803 (44.46%), Query Frame = 0
Query: 1527 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAV---------PDPSRGRALRGVRSA-----------VGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWA---GVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPLEEEEQDDGDPADGVDEEVE--------GPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRR----------TRG-NLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY---------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 2269
            V+D+++H VG  +G      L R+++++ L NGDLL+Y A            G    V  F ++  +LITRP   +PP+A           P+ +    L  +R+            V      F R G     IL +RG     P+        S +PP   G   + A    V + S  P +  N  P G     + G   LR      +    + P +SGG          FV  K E GAT+H +L+L      PG + + L++       YAV+ S          L+  + D     +G +EE+E         PL  + +       AD             +ELR++                                    + D+ G  GR G+        V  E    VLS   +  + +D+      ++    E     R ++ VGTG     GED++ RGRL+L+E+DYA    E+GG       KLR VF KE         G +S +SQLG +++ +VG K+IV  ++ K+  L    FYDA++Y++ LSV+K+ F++ GD Y SV  + WRE    L  L+KD+E   V A E+ V E  + ++  D   NL V+Q+AP+   SRGG  LL  SDF LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ER+FRRL+ LQ +M N L    + NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT E VM NLL++  A+
Sbjct:  944 VADIVIHRVGPSEGQHNAQYLSRMVMLVFLANGDLLMYSAAPKFESLKPRANGEIAPVFHFVRVGTELITRPF--LPPKARTNAHNEAGNNPEVNTSAVLAKLRAGFRYPMLTCFHNVNNMSGAFFR-GAHPMWILGDRGHASFVPMCVP-----SSAPPKANGTSKNAAPRVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGSH--GPGGVAEALEAPT-----YAVVCSAR--------LKPADADRATEVEGAEEELEPENLDPNGNPLGSNVMAPTAEMFADYETDHMAHTEEDVYELRLV------------------------------------QTDEFGEWGRRGV------FRVHFERYEVVLSVKLM--YLYDSSLMKEEVASTSPEWNKKKRPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A484E9Q8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9Q8_BRELC)

HSP 1 Score: 236 bits (603), Expect = 1.070e-58
Identity = 237/802 (29.55%), Postives = 351/802 (43.77%), Query Frame = 0
Query: 1527 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQE-------------------GICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGEVLSASTVETHPFDADENALCMSLVRLEQGGF---------------PRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGARYCLLA----------GTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFD--------RGPTF-RYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 2269
            V+D+++H VG  +G    S L R++L++ L NGDLL+Y A  T       +      +  F +++ +LITRP   VPP+          +L    SAV  +                     CF R G     IL  RG  C   +   +    S         PP  + V + S  P +  N  P G     + G   LR      +    + P +SGG          FV  K E GAT+H +L+L +    PG + + L +       YAV+ S +M+   AE   E E  DD    + +D      L  + +       +D  L   P      +ELR++            ++    D  GV                                               H F+  E  LC+ L+ L                     R ++ +GTG     GED++ RGRL+L+E+DYA    E+GG       KLR VF KE         G +SA++QLG +++ +VG K+IV  ++ K+  L    FYDA+++++ L+V+K+ FIL GD Y SV  + WRE    L  L+KD+E   V A E+ V E  + ++  D   NL VLQY P+   SRGG  LL  SDF LG +VA + R+R    + G   Y   A          GT +GG+ A++PV ER+FRRLY LQ +M N L    + NPR +R+          RG  + + + K++ LD  +L++F+ LD   Q +L R IGTT E V+ NLL++  A+
Sbjct: 1023 VADIVIHRVGPSEGQMNASYLARMVLLVFLANGDLLLYAATPTHDR---LQSRSSSPIFQFIRINTELITRPF--VPPKVRPSTHLNETSLETSTSAVVAKLRAGFRYPMLTKFYNVNTMSGCFFR-GAHPMWILGNRGHPCFVRMCVPNAAIKSPLVANQTTTPPRVS-VPVLSFTPFHHWNC-PNGFIYFHSRGS--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVAEALVAPT-----YAVVCSLRMKPADAENATEVETVDDELETETLDANGNVLLGSNVMAPTTEMFSDLELSAFPHTEEDVYELRLV----------QTNEFREWDFRGV--------------------------------------------FRVH-FERFEVVLCIRLMYLFDSSLLHDEVASTSVEWHRKKRPYLVLGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFMKEH------RQGAISAVAQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FILYGDVYKSVHFLQWRELQRQLLLLAKDYEPLTVSATEFSVFETKVALLAVDMDENLHVLQYLPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVE--MAGAGAYTRKAAVLSCYVNVLGTSEGGIMALVPVSERVFRRLYTLQNVMINTLQQNCALNPREFRMLKTNGQQRCGRGDAWSKKKWKKSFLDAMVLFQFLTLDYVAQKELARCIGTTSEVVIHNLLEVQHAT 1730          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: G4Z3I9_PHYSP (Putative cleavage and polyadenylation specificity factor CPSF n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z3I9_PHYSP)

HSP 1 Score: 236 bits (603), Expect = 1.090e-58
Identity = 229/792 (28.91%), Postives = 357/792 (45.08%), Query Frame = 0
Query: 1527 VSDVLVHPVGAVDGP---SALRRLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAVPDPSRGRALRGVRSAVGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSW-------------------AGVGLGSLAPLNKRNAFPGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALAPGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGE----VLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV--KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRG-------NLRGG----ARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY---------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 2269
            V+D+++H VG  +G      L ++++++ L NGDLL+Y A            G    V  F ++  DLITRP+  +PP          RA     +  G        P   ++ +LA+  A    P+        + S     GA P W                     V + S  P +  N  P G     + G   LR      +    + P +SGG          FV  K E GAT+H +L+L +    PG + + L++       YAV+ S KM+ T AE+  E E+ D+    + +D     P+  + +        D  +          +ELR++                                    + ++ G  GR G+        V  E    VLS   +  + +D+      ++    E     R ++ +GTG     GED++ RGRL+L+E+DYA    E+GG   +   KLR VF KE         G +S++ QLG +++ +VG K+IV  ++ K+  L    FYDA+++++ L+V+K+ F++ GD Y SV  + WRE    L  L+KD+E   V A E+ V E  + ++  D   NL V+Q+AP+   SRGG  LL  SDF LG +VA + R+R  G       N RG     + Y  + G  +GG+GA++PV ER+FRRL+ LQ +M N L    + NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT E V+ NLL++  A+
Sbjct: 1050 VADIIIHRVGPSEGQHNAQYLSQMVMLVFLANGDLLMYSATPKYESLKPRANGEVAPVFHFVRVGSDLITRPL--IPP----------RARTSAHNEAGNN------PEVNTSAVLAKLRAGFRYPMLTTFYNVNNMSGAFFRGAHPMWILGDRGQPTFIPMCSAAPKVSVPVLSFTPFHHWNC-PNGFIYFHSRGA--LRVCELPSSKTSTILP-SSGG----------FVLQKAEFGATLHHMLYLGNH--GPGGVSEALEAPT-----YAVVCSVKMKPTDAERATEVEDADEEKEPENLDANG-NPVGSNVMAPTAEMFPDFEIDQMAHTEEEVYELRLV------------------------------------QTNEFGEWGRRGV------FRVHFERYEVVLSVKLM--YLYDSSLMKEEVASTSAEWNKKKRPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVDEEGGSTSSKLPKLRLVFIKEH------RQGAISSVVQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVDGPGGHVAVNGRGPRAPPSYYVNVMGNSEGGVGALIPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1748          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A5D6Z0P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Z0P8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.140e-58
Identity = 226/800 (28.25%), Postives = 353/800 (44.12%), Query Frame = 0
Query: 1527 VSDVLVHPVGAVDGPSALR---RLILVMHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVPPEAAV----------PDPSRGRALRGVRSA-----------VGQEGICFARPGCRSALILAERGAVCVTPIAQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAF-----PGGGFAAVTAGGGRLRFISAAPASAQLVTPGTSGGGGLXXXGQGHFVAAKIELGATVHGVLHLPHELAQPGKMGDILKSLLLKRGHYAVLVS-KMEDTLAEQPLEEEEQDDGDPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHR--------FELRVLALAP-------GVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDGGGVSVPGEVLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAV-KLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGG-ARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFRY----------ETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLAS 2269
            V+D+ +H VG  +G    +   R++L++ L NGDLL+Y A         +  GG      F+++S DLITRP   +PP++            P+ +    +  +R+            V      F R G     +L+ERG   + PI           PP PP  P S   V      P+     F     P G     ++G  R+  +   P+S       +SGG          FV  K E GAT+H +L+L +    PG + + L++       +AV+ S +M    AE+  E    D  D  D  D +  GP         N  V  P     P + V          +ELR++  +        GV   H     F R                                       V   VLS   +  + +D+      ++    E     R +V VGTG     GED++ RGRL+L+E+DYA      G     + KLR +F K+         G +S ++QLG ++I +VG K+IV  ++ K+  L    FYDA+++++ +S++K+ F++ GD Y S   + W+E    L  L+KD+E   V   E+ + E  + ++  D   NL V+QYAP    SRGG  LL   DF LG +V+ + R+R    +R     Y  + G+ +G + A++PV ER+FRRL+ LQ +M N L    + NPR +R   +  + R+          + K++ LD  +L+RF+ LD   Q ++TR IGTT E V+ NLL++  A+
Sbjct: 1102 VADIAIHRVGPSEGQHNAQFFARMVLLVFLANGDLLMYAATPRLGSAPPSAAGGAPVSFQFARVSTDLITRPF--LPPKSRTGTSHHESGNNPEANTSAVIAKLRAGFRYPMLTRFDNVNNMSGAFFR-GAHPMWVLSERGLPSLVPICVT-------VPPSPPPMPASGGNVPQRVTVPVLSFTPFHHWNCPNGFIYFHSSGALRVCEL---PSSKTTTLLPSSGG----------FVLRKAEFGATIHHMLYLGNR--GPGGVSEALETPT-----FAVVCSTRMAPAEAEKATENA--DAADEPDAEDLDANGP---------NGNVMAPTAEMFPDVAVENMANTEEDVYELRLVQTSEFGDWERHGVFRVH-----FER-------------------------------------YEV---VLSVKLM--YLYDSSLMKEEVASTSREWAKKKRPYVVVGTGYVGPHGEDESGRGRLLLYELDYAQYVNHSGSTSGKLPKLRLIFVKDH------RQGAISMVAQLGPYVIAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVSISIVKD-FVMYGDVYKSAHFLRWKEKQRQLVLLAKDYEPLAVSTTEFNLFEKRLALLAVDVEENLHVMQYAPNDIESRGGQRLLRTGDFHLGVQVSSMFRKRITPAIRSAPVAYVNILGSSEGSISALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRAM-KANSHRHSGRPDAWSKQKWKKSFLDAQVLFRFLQLDYVAQKEITRCIGTTPEVVVHNLLEVQRAT 1803          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 217 bits (552), Expect = 2.910e-58
Identity = 134/374 (35.83%), Postives = 199/374 (53.21%), Query Frame = 0
Query: 1927 LCMSLVRLEQGGFP----------RMHVAVGTGMNDAQGEDKAARGRLILFEVDYA-YLAKEDGGHEHAVKLRQVFAKEQLGPIAGESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGAR---------------YCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDRGPTFR---------YETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDI 2265
            LC +    E GGF           + +V +GTG     GED++ +GRL+L+E+DYA Y   E        KLR +F KE         G +S +SQLG H++ +VG K+IV  ++ K+  L    FYDA++Y++ LSVIK+ +++  D Y SV  + WRE    L  L+KD+E   + A E+ V E  + ++  D   NL V+Q+AP+   SRGG  LL  SDF LG ++  + R+ T  +    A+               Y  L G+ +G +GAI+ V ER+FRRL+ LQ +M N L    + NPR +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT E ++ NLL++
Sbjct:    3 LCDASQMKENGGFVATSADWYKRRKPYVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367          
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.030e-58
Identity = 137/363 (37.74%), Postives = 201/363 (55.37%), Query Frame = 0
Query: 1942 MHVAVGTGMNDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAVKLRQVFAKEQLGPIAGESGPVSAISQLGW----HLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIGLSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVDEPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTRRRTRGNLRGGA--------------------------RYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALGHTGSANPRAYRLFDR----GPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRAIGTTVERVMSNLLDIDLASL 2270
            + V VGTG+ D  GED  ++GR++LFEV      KE+      + L   ++K+ L       GPV+ +  L       L++  G +V V +W  K + L  IGF+ A++ V G+++ K  F+L+ DAY S+  +VWRE D +LT L+KD+E   V+AA ++   P M  V  D R NL+  QYAP  P SRGG  L+C++D+ LG++   L     R +L  G+                          R+ +  GT+DGG GA+ PV+ER FRRLYALQG++ NAL  +G+ N R +RLF R    G     E ++ +LDG LL R+  L    Q ++ RAIGTTV+ +M NLL++D A +
Sbjct:  192 LFVVVGTGIVDQDGEDIGSKGRVLLFEVKKP---KENVNAASPLSLSLTYSKDIL------LGPVTVLEGLKTGNQTRLVIGAGAEVTVEQW--KDQQLTQIGFFHAQMQVQGVTMFKT-FMLLSDAYDSIHFLVWRESDKSLTLLAKDYEPTCVYAAGFINRGPTMYFVCHDDRENLQFFQYAPTDPASRGGNKLVCRADYHLGTQTTHLRTHLVRNSLLLGSATPATSWIALRHRDAMALRQEDPDCRRFGVHFGTVDGGFGAVFPVNERTFRRLYALQGVVGNALQQSGALNVRGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W8_ECTSI0.000e+046.97Cleavage and polyadenylation specificity factor CG... [more]
D7G8W9_ECTSI2.240e-13886.53CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z873_9STRA3.390e-6743.28Cleavage/polyadenylation specificity factor, A sub... [more]
A0A662X1P8_9STRA1.100e-6229.66Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A833S4Z4_PHYIN4.940e-6029.64CPSF A subunit region n=2 Tax=Phytophthora infesta... [more]
A0A484E9Q8_BRELC1.070e-5829.55Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4Z3I9_PHYSP1.090e-5828.91Putative cleavage and polyadenylation specificity ... [more]
A0A5D6Z0P8_9STRA1.140e-5828.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4CF34_PYTIN2.910e-5835.83CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A7S1BI36_9STRA3.030e-5837.74Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 1912..2236
e-value: 1.7E-56
score: 191.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1078..1397
e-value: 2.0E-5
score: 25.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 296..538
e-value: 4.1E-11
score: 44.1
coord: 18..146
e-value: 7.9E-6
score: 26.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1906..2178
e-value: 6.3E-50
score: 172.3
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 955..2249
coord: 9..574
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 955..2249
coord: 9..574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig641contigF-serratus_M_contig641:151205..176067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig641.17328.1mRNA_F-serratus_M_contig641.17328.1Fucus serratus malemRNAF-serratus_M_contig641 151072..176067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig641.17328.1 ID=prot_F-serratus_M_contig641.17328.1|Name=mRNA_F-serratus_M_contig641.17328.1|organism=Fucus serratus male|type=polypeptide|length=2272bp
MTSTAIYTCYRQLHPPTGVDHAVFGSVTAPNSHDLVVAKASILELYRVHR
DPSPSSPTGVGGVSPQGDASTGAGAGYFLELVGTFPIAGNITALAVIPVE
RSTAPSTQQQRDILVVSFDFAKTALVAYDSTLGRMSTLSIHNFDPDAIGP
GSGGVEPSYGLASALKDRPSTIYSCDPAGRCLSAVVAGCLLVVLPTLRHV
PPTVFLSEEAKKRVLLPRRHGRRRNPEVQNDNADLEVEGAAVVEATEAAV
EGANQDRSNGKGLRDDYGGDDEEEEEASSDGGEAEQDAGGAFAFDDSRAS
RVRPTVSKPFTLDLEAVGVTGFIKAAVFLEGFHEPALALLYEPIQTCPGR
LASMRSTCRLLLLSLNLVQGRAPVIWRVDNLPHDSWDLVAVPAPFGGVQV
ISTNAVIHVNDSEVLSILAVNGYARATVEDALLGCPLRASSGDWDWASFR
HSRSALEVVDLSSYDVCVELDVMSCAFVTPTSMLLSLKGGEVYALRLHVS
PGLGCGVLGASGRVVGQSMRPIGRATPCSALAVSARGSDGGGSDGDGDSA
GPSTGLVFMGSRVGDSLLVDYEVAMCGARSGGRGGSTAAVAAKHEPKEEA
GGAVRARTIAEERRGEVGEAPVQAGEGARSPGAGAPGEGCGTSGGAEGVG
VSSAGSALPGGASRSLGGDDGNDDADVSGREKSEGRTLARGGADSGKGNA
GETHSSAVASAMETETRPSEERGAPEGSAAGMEAATDGSSKDSDPRVEES
DAEGQRKKRVRDEALRERSGSGAQEKMVGVDGGEGGEEANGAAEPPRKGK
KLCVSTSETKLAAPKIESEEAGSERTVVVSATPGTGSHDDRDESMNDASL
PLTGSTRLSDAGTSPAEEKGRQQKGAAAATTAEHALRGEGNPSTVGVVWD
RKPSSSTQGPSVSSSRDNKVPLEDRETIAEEEELYGTVLGTEPEGAGGGG
RELSRLGSRYGERVVEAVGFRLKVVDSLCTLGPIVDAALVPSAYHVPRAA
IAPGGASSRSGSWVRGGGGVARGGKGGRTRSPSPLPPPTPPPLERGTSGG
GIRTTLVCAAGYGQQGSLAVFSAGLRTEVVVDLAVPGATGVFAAPEGVIG
EGESRGDTLVLVSSSPLIEQRASAGSGGGGVGGGGGGKADGKGHTRVLAF
EDDLRVVELVPESDGNPFVCDAATVDLCAMAGSTIVQAHAQGLRVTRRRE
FVQEVLAAEDREMDGLGAGPDVTVLKAAAAGAFACCLLSNSYLHLMALEA
GEPEEADLMPVGVWEEDDSKADNGGGSSAEGVWTDVEAMCMFGVRPSGAR
GFATAGPSAEQTKGWWGGDAWGEDLYSSSGDGACGGCEQTASTYLVVCRK
EGALEIHACQGRGKEATTRTVFRASKAVLAPSTLWNELLLVPSPTAPYLS
ESESDLEALSLTANGDAVPPGGDDAGVGDDRRWSSPTGDDGDGEGEGGGR
GLGVATGVVAADGRRLERAAASNGSASSRSIGRETAAHSEPMEVESPRRD
TTRTPGANLAPEGGGGDEDDGVVCPAVSDVLVHPVGAVDGPSALRRLILV
MHLDNGDLLVYQARMTSREGGSARGGGREQVICFSKLSHDLITRPVKGVP
PEAAVPDPSRGRALRGVRSAVGQEGICFARPGCRSALILAERGAVCVTPI
AQDDLGDGSGSPPLPPGAPPSWAGVGLGSLAPLNKRNAFPGGGFAAVTAG
GGRLRFISAAPASAQLVTPGTSGGGGLGGGGQGHFVAAKIELGATVHGVL
HLPHELAQPGKMGDILKSLLLKRGHYAVLVSKMEDTLAEQPLEEEEQDDG
DPADGVDEEVEGPLARHAVKHKNWTVADPALGGAPQLLVHRFELRVLALA
PGVAAAHSPSKGFHRDTEGVDGSTEGDRGREDSRDDDSGSMGRGGIGVDG
GGVSVPGEVLSASTVETHPFDADENALCMSLVRLEQGGFPRMHVAVGTGM
NDAQGEDKAARGRLILFEVDYAYLAKEDGGHEHAVKLRQVFAKEQLGPIA
GESGPVSAISQLGWHLILSVGKKVIVNRWDPKTRTLELIGFYDARVYVIG
LSVIKNRFILVGDAYGSVQLVVWREDDHTLTQLSKDHEKCEVFAAEYLVD
EPGMGIVVADGRRNLKVLQYAPKAPNSRGGTMLLCQSDFFLGSRVAKLTR
RRTRGNLRGGARYCLLAGTLDGGLGAILPVDERIFRRLYALQGIMSNALG
HTGSANPRAYRLFDRGPTFRYETKQNMLDGTLLWRFVGLDARTQNDLTRA
IGTTVERVMSNLLDIDLASLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004871Cleavage/polyA-sp_fac_asu_C
IPR015943WD40/YVTN_repeat-like_dom_sf