prot_F-serratus_M_contig640.17325.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig640.17325.1
Unique Name	prot_F-serratus_M_contig640.17325.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	164

Homology

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 8.350e-52
Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLVPPN--QKDNLSPELSAGSSK 150
            A+IDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY  HIVHYFLHQ P   +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP  LV  +  ++D  S E   GS K
Sbjct:  708 AIIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLVSQSAPEEDAASVERHTGSKK 851

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 5.350e-51
Identity = 91/124 (73.39%), Postives = 107/124 (86.29%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 132
             +IDVELLGFVYH+ L++NGIT I+LIMAVGLVVDY  HIVHYFLHQ P   +DA+IA ALGE+GPSVM GAATTFLGIMP+AFA+N +FRVFF +F++II FGF+HGVVFIPV LS+LP  LV
Sbjct:  400 VIIDVELLGFVYHWNLDMNGITAIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFANNVIFRVFFNMFLVIISFGFFHGVVFIPVVLSILPDRLV 523

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.420e-50
Identity = 93/124 (75.00%), Postives = 109/124 (87.90%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 132
             +IDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY  HIVHYFLHQ P   +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP  LV
Sbjct:  778 VVIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVMLSILPDRLV 901

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 7.380e-50
Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 0

Query:   10 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 132
            +IDVELLGFVYH+ L+VN ITVI+LIMAVGLVV+Y  HIVHYFLHQ P   +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP  LV
Sbjct:  807 IIDVELLGFVYHWNLDVNSITVIELIMAVGLVVEYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLV 929

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 5.710e-49
Identity = 87/130 (66.92%), Postives = 108/130 (83.08%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLVPPNQKD 138
             ++D ELLGFVY YGL+VN ITVIQLIMAVGLVVDY  H+VHYFLHQ P + +D +IA+ALGE+GPS+++GA TTFLGIMP+ FA N +FRVFFK+F++II FGFYHGVVF+PV LS+LP  L+  +  D
Sbjct:  668 VIVDAELLGFVYLYGLDVNSITVIQLIMAVGLVVDYMVHLVHYFLHQDPRTPKDTRIADALGEIGPSLLMGAGTTFLGIMPLVFAHNVIFRVFFKMFLVIISFGFYHGVVFVPVMLSILPDSLISSSPND 797

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.620e-41
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 112
             MIDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY  HIVHYFLHQ P   +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FG
Sbjct:  634 VMIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 737

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY96_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.900e-41
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 112
             +IDVELLG VYH+ L+V GIT I+LI A+GLVVDY  HIVH+FLHQ P   +DA+IA ALGE+GPSVM+GAATTFLGI+P+AFA+ F+FRVFFK+F++II FG
Sbjct:   57 VIIDVELLGSVYHWNLDVKGITAIELITALGLVVDYIVHIVHFFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIIPLAFANTFIFRVFFKMFLVIISFG 160

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.070e-40
Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 112
             +IDVELLGFVYH+ L VN ITVI+LIMAVGLVVDY  HIVHYFLHQ P   +DA+IA+ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FG
Sbjct:  729 VIIDVELLGFVYHWNLNVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIADALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 832

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 4.700e-39
Identity = 75/104 (72.12%), Postives = 91/104 (87.50%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 112
             +IDVELLGFVYH+ L+VN +TVI+LIMAVGLVVDY  HIVHYFLHQ P+  +D +IA+ LGE+GPSV++GAATTFLGI PMAFA+N VFRVFFK+F++II FG
Sbjct:  746 VIIDVELLGFVYHWRLDVNSLTVIELIMAVGLVVDYMVHIVHYFLHQDPDRDKDVRIADGLGEIGPSVVVGAATTFLGITPMAFAANHVFRVFFKMFLIIIGFG 849

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BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A7S2WB03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB03_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.190e-34
Identity = 65/120 (54.17%), Postives = 92/120 (76.67%), Query Frame = 0

Query:    9 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLP 128
             +IDVE++G +Y +GL VN +TV+QL+MAVGLVVDYTAHI+HY+L Q        ++ +AL E+GPSV+LG  TTFLG+MP+AFA + +FR FF++F+ IIV+G  HG++F+P  +  LP
Sbjct:  194 CVIDVEIIGTMYFWGLNVNTVTVVQLVMAVGLVVDYTAHILHYYLQQPFHKEPMERLRDALVEIGPSVLLGCFTTFLGVMPLAFAQSVIFRTFFRMFLSIIVYGAAHGLIFLPAIIPSLP 313

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FY98_ECTSI	8.350e-52	69.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JGQ4_9PHAE	5.350e-51	73.39	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7FY89_ECTSI	1.420e-50	75.00	Novel protein n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
D7FY95_ECTSI	7.380e-50	74.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LCK4_ECTSI	5.710e-49	66.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L5K0_9PHAE	1.620e-41	75.96	SSD domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FY96_ECTSI	3.900e-41	69.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FY88_ECTSI	1.070e-40	75.00	SSD domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LCK9_ECTSI	4.700e-39	72.12	Similar to Patched domain-containing protein 3, pa...	[more]
A0A7S2WB03_9STRA	1.190e-34	54.17	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1640.10		coord: 9..138 e-value: 8.4E-13 score: 50.0
None	No IPR available	PANTHER	PTHR10796	PATCHED-RELATED	coord: 8..138
None	No IPR available	PANTHER	PTHR10796:SF92	PATCHED-RELATED, ISOFORM A	coord: 8..138
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..30
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 104..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..163
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..53
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 54..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..103
None	No IPR available	SUPERFAMILY	82866	Multidrug efflux transporter AcrB transmembrane domain	coord: 15..127
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 76..98
None	No IPR available	TMHMM	TMhelix		coord: 105..127
IPR003392	Protein patched/dispatched	PFAM	PF02460	Patched	coord: 9..127 e-value: 1.6E-24 score: 86.0
IPR000731	Sterol-sensing domain	PROSITE	PS50156	SSD	coord: 16..126 score: 11.856

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig640	contig	F-serratus_M_contig640:261041..264074 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig640.17325.1	mRNA_F-serratus_M_contig640.17325.1	Fucus serratus male	mRNA	F-serratus_M_contig640 260152..264119 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig640.17325.1 ID=prot_F-serratus_M_contig640.17325.1|Name=mRNA_F-serratus_M_contig640.17325.1|organism=Fucus serratus male|type=polypeptide|length=164bp
MPIRLNNFAMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVH
YFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRV
FFKIFILIIVFGFYHGVVFIPVALSLLPGCLVPPNQKDNLSPELSAGSSK
SQETPETGNSVEE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003392	Ptc/Disp
IPR000731	SSD