mRNA_F-serratus_M_contig640.17325.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.120e-47 Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 1
Query: 70 AMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLVPPN--QKDNLSPELSAGSSK 495
A+IDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY HIVHYFLHQ P +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP LV + ++D S E GS K
Sbjct: 708 AIIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLVSQSAPEEDAASVERHTGSKK 851
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE) HSP 1 Score: 180 bits (456), Expect = 8.350e-47 Identity = 91/123 (73.98%), Postives = 107/123 (86.99%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 441
+IDVELLGFVYH+ L++NGIT I+LIMAVGLVVDY HIVHYFLHQ P +DA+IA ALGE+GPSVM GAATTFLGIMP+AFA+N +FRVFF +F++II FGF+HGVVFIPV LS+LP LV
Sbjct: 401 IIDVELLGFVYHWNLDMNGITAIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFANNVIFRVFFNMFLVIISFGFFHGVVFIPVVLSILPDRLV 523
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI) HSP 1 Score: 182 bits (463), Expect = 2.470e-46 Identity = 93/123 (75.61%), Postives = 109/123 (88.62%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 441
+IDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY HIVHYFLHQ P +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP LV
Sbjct: 779 VIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVMLSILPDRLV 901
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI) HSP 1 Score: 181 bits (459), Expect = 9.080e-46 Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLV 441
+IDVELLGFVYH+ L+VN ITVI+LIMAVGLVV+Y HIVHYFLHQ P +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FGF+HGVVFIPV LS+LP LV
Sbjct: 807 IIDVELLGFVYHWNLDVNSITVIELIMAVGLVVEYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLV 929
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI) HSP 1 Score: 178 bits (451), Expect = 6.300e-45 Identity = 89/140 (63.57%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLPGCLVPPNQKDNLSPELSAGSS 492
++D ELLGFVY YGL+VN ITVIQLIMAVGLVVDY H+VHYFLHQ P + +D +IA+ALGE+GPS+++GA TTFLGIMP+ FA N +FRVFFK+F++II FGFYHGVVF+PV LS+LP L+ + D + +S S
Sbjct: 669 IVDAELLGFVYLYGLDVNSITVIQLIMAVGLVVDYMVHLVHYFLHQDPRTPKDTRIADALGEIGPSLLMGAGTTFLGIMPLVFAHNVIFRVFFKMFLVIISFGFYHGVVFVPVMLSILPDSLISSSPNDKRAASVSRDDS 808
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.330e-37 Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 381
MIDVELLGFVYH+ L+VN ITVI+LIMAVGLVVDY HIVHYFLHQ P +DA+IA ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FG
Sbjct: 635 MIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 737
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY96_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.940e-37 Identity = 72/103 (69.90%), Postives = 89/103 (86.41%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 381
+IDVELLG VYH+ L+V GIT I+LI A+GLVVDY HIVH+FLHQ P +DA+IA ALGE+GPSVM+GAATTFLGI+P+AFA+ F+FRVFFK+F++II FG
Sbjct: 58 IIDVELLGSVYHWNLDVKGITAIELITALGLVVDYIVHIVHFFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIIPLAFANTFIFRVFFKMFLVIISFG 160
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI) HSP 1 Score: 154 bits (390), Expect = 8.610e-37 Identity = 78/103 (75.73%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 381
+IDVELLGFVYH+ L VN ITVI+LIMAVGLVVDY HIVHYFLHQ P +DA+IA+ALGE+GPSVM+GAATTFLGIMP+AFA+N +FRVFFK+F++II FG
Sbjct: 730 IIDVELLGFVYHWNLNVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIADALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 832
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI) HSP 1 Score: 150 bits (378), Expect = 3.310e-35 Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFG 381
+IDVELLGFVYH+ L+VN +TVI+LIMAVGLVVDY HIVHYFLHQ P+ +D +IA+ LGE+GPSV++GAATTFLGI PMAFA+N VFRVFFK+F++II FG
Sbjct: 747 IIDVELLGFVYHWRLDVNSLTVIELIMAVGLVVDYMVHIVHYFLHQDPDRDKDVRIADGLGEIGPSVVVGAATTFLGITPMAFAANHVFRVFFKMFLIIIGFG 849
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Match: A0A7S2WB03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB03_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.680e-31 Identity = 65/119 (54.62%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 73 MIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHYFLHQSPESSRDAQIANALGEVGPSVMLGAATTFLGIMPMAFASNFVFRVFFKIFILIIVFGFYHGVVFIPVALSLLP 429
+IDVE++G +Y +GL VN +TV+QL+MAVGLVVDYTAHI+HY+L Q ++ +AL E+GPSV+LG TTFLG+MP+AFA + +FR FF++F+ IIV+G HG++F+P + LP
Sbjct: 195 VIDVEIIGTMYFWGLNVNTVTVVQLVMAVGLVVDYTAHILHYYLQQPFHKEPMERLRDALVEIGPSVLLGCFTTFLGVMPLAFAQSVIFRTFFRMFLSIIVYGAAHGLIFLPAIIPSLP 313 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig640.17325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig640.17325.1 >prot_F-serratus_M_contig640.17325.1 ID=prot_F-serratus_M_contig640.17325.1|Name=mRNA_F-serratus_M_contig640.17325.1|organism=Fucus serratus male|type=polypeptide|length=164bp MPIRLNNFAMIDVELLGFVYHYGLEVNGITVIQLIMAVGLVVDYTAHIVHback to top mRNA from alignment at F-serratus_M_contig640:260152..264119- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig640.17325.1 ID=mRNA_F-serratus_M_contig640.17325.1|Name=mRNA_F-serratus_M_contig640.17325.1|organism=Fucus serratus male|type=mRNA|length=3968bp|location=Sequence derived from alignment at F-serratus_M_contig640:260152..264119- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig640:260152..264119- >mRNA_F-serratus_M_contig640.17325.1 ID=mRNA_F-serratus_M_contig640.17325.1|Name=mRNA_F-serratus_M_contig640.17325.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig640:260152..264119- (Fucus serratus male)back to top |