mRNA_F-serratus_M_contig639.17290.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.100e-63 Identity = 111/170 (65.29%), Postives = 131/170 (77.06%), Query Frame = 1
Query: 10 LKITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVYS 519
+ IT GTFT +EADFGGFLY EG G SC AS+ H GVDGGA+YAVE A L+W C L +N AL GPAIYARD A + +R V+LY+N ++RGSVVF+ SS+L TYQ VF D GSSDLSAVQ D DS+Y A T+F GF GEAVVFS+G L+LD+CDFS S+ASVLVYS
Sbjct: 516 INITQGTFTNNEADFGGFLYKEGPGNASCTGASVVGHRGVDGGAVYAVEGAKLEWGCDLVNNSALAGPAIYARDNAEVVLRGVELYDNVVARGSVVFIVSSNLTTYQTVFTDTEGSSDLSAVQADEDSSYKAEDTSFVGFAGEAVVFSEGILYLDDCDFSGSAASVLVYS 685
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 214 bits (545), Expect = 3.840e-61 Identity = 108/170 (63.53%), Postives = 128/170 (75.29%), Query Frame = 1
Query: 10 LKITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVYS 519
+ IT GTFT +EADFGGFLY EG G SC AS+ H GVDGGA+YAVE A L+W C L +N AL GPAIYARD A + +R V+L +N ++RGSVVF+ SS+L TYQ VF D GS DLSAVQ D DS+Y A T+F GF G AVVFS+G L+LDEC+FS S+ASVLVYS
Sbjct: 166 IDITQGTFTNNEADFGGFLYKEGPGNASCTGASVAGHRGVDGGAVYAVEGAKLEWGCDLVNNSALAGPAIYARDNAEVVLRGVELCDNVVARGSVVFVVSSNLTTYQTVFTDTAGSPDLSAVQADEDSSYKAEDTSFVGFAGRAVVFSEGTLYLDECNFSGSTASVLVYS 335
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 211 bits (536), Expect = 6.430e-60 Identity = 106/169 (62.72%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 13 KITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVYS 519
+IT GTFT +EADFGGFLY EG G C AS+ H GVDGGA+YAVE A L+W CHL +N AL GPAIYARD A + +R +L +N ++RGSVVF+ SS+L TYQ VF D GS+DLSAVQ D DS+Y A T+F GF GEAVVF +G L+LD+CDFS S+ASVLV S
Sbjct: 605 QITQGTFTNNEADFGGFLYKEGSGNAYCTGASVVGHRGVDGGAVYAVEGAKLEWGCHLVNNSALAGPAIYARDNAEVVLRGAELNDNVVARGSVVFVVSSNLTTYQTVFTDTGGSADLSAVQADEDSSYKAEDTSFVGFAGEAVVFCEGILYLDDCDFSGSTASVLVQS 773
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.780e-46 Identity = 81/147 (55.10%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 76 GDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVY 516
G+G +C A++ +H G+DGGAIYA++ A L+WACH+++N AL+GPAIYARD A + +R V++ +N ++RGS +FL +S+ T QVV D + +SDLSAVQ D STY A T F GF GE VV+S+G+L+LDECDFS SS++VLVY
Sbjct: 412 GEGNATCSGATVLQHEGIDGGAIYAIDGANLEWACHIRENSALIGPAIYARDNAVVALRGVEVSDNFVTRGSAIFLVNSTFITSQVVVNDTSENSDLSAVQTDALSTYTAQDTCFVGFAGEVVVYSEGELYLDECDFSGSSSAVLVY 558
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 169 bits (428), Expect = 2.130e-45 Identity = 85/169 (50.30%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 10 LKITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVY 516
++ITGGTF ++ADF +C GVDGGAIYAV+ A L+W CHL++N AL+GPAIYARD A + + V++ +N ++RGS +F+ +S+L T QVV D + + DLSAVQ D STY+A T+F GF GE VV+ +G+L+LDECDFS SS++VLVY
Sbjct: 611 IEITGGTFISNKADFXXXXXXXXXXNAACXXXXXXXXXGVDGGAIYAVDGANLEWECHLRENSALIGPAIYARDYAVVALSGVEVADNFVTRGSAIFVVNSALITSQVVVSDTSENPDLSAVQTDRLSTYIAEDTSFVGFAGEVVVYGEGELYLDECDFSGSSSAVLVY 779
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G120_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G120_ECTSI) HSP 1 Score: 150 bits (378), Expect = 6.680e-39 Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 115 KHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDEC------DFSNSSASVLVY 516
KH GVDG AIYA++ A L+W C+L++N AL+GPAIYARD A + + V++ +N ++RGS +F+ +S L TYQVV D + + DLSAVQ D STY A T+F GF GE VV+S+G L+LDEC DFS SS++VLVY
Sbjct: 437 KHEGVDGDAIYAIDGANLEWECNLRENSALIGPAIYARDNAVVALSGVEVSDNFVTRGSAIFVVNSELITYQVVVNDTSENPDLSAVQTDRLSTYTAEDTSFVGFAGEVVVYSEGGLYLDECGYLDECDFSGSSSAVLVY 576
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 145 bits (365), Expect = 6.230e-37 Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 148 AVEDAVLDWACHLKDNEALVGPAIYARDGASITVRNVDLYENAISRGSVVFLASSSLYTYQVVFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVYSVSE 528
AV+ A L+W CHL++N AL+GPAIYARD A +T+ V++ +N ++RGS +F+ +S L TYQVV D + + DLSAVQ D STY A T+F GF GE VV+S+G L+LDECDFS SS++VLVY+ E
Sbjct: 472 AVDGANLEWECHLRENSALIGPAIYARDNAVVTLSGVEVSDNFVTRGSAIFVVNSELITYQVVVNDTSENPDLSAVQTDRLSTYTAEDTSFVGFAGEVVVYSEGGLYLDECDFSGSSSAVLVYAEKE 598
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: A0A6H5JS62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS62_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.280e-21 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 25 GTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAI 219
GTFT +EADFGGFLY E G SC AS+ +H GVDGGA+YAVE A L+W CHL +N AL GPA+
Sbjct: 3 GTFTNNEADFGGFLYKEVPGNASCTGASVARHRGVDGGAVYAVEGAKLEWGCHLVNNSALAGPAM 67
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G5M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M1_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 2.860e-19 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 10 LKITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAVEDAVLDWACHLKDNEALVGPAI 219
+ IT GTFT +EADFGGFLY EG G SC ASI H GV+GGA+YAVE L+W C L +N AL GPA+
Sbjct: 101 ISITQGTFTNNEADFGGFLYKEGPGNASCTGASIAGHRGVNGGALYAVEGPKLEWGCDLVNNSALTGPAM 170
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 9.280e-16 Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 334 VFVDFTGSSDLSAVQVDGDSTYVAVQTTFNGFEGEAVVFSDGKLHLDECDFSNSSASVLVYS 519
VF D GSSDLSAVQ D DS+Y A +T+F GF G+AVVFS+G L+LD+C+FS SSASVLVYS
Sbjct: 8 VFTDTGGSSDLSAVQADEDSSYKAEETSFVGFAGDAVVFSEGTLYLDDCNFSGSSASVLVYS 69 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig639.17290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig639.17290.1 >prot_F-serratus_M_contig639.17290.1 ID=prot_F-serratus_M_contig639.17290.1|Name=mRNA_F-serratus_M_contig639.17290.1|organism=Fucus serratus male|type=polypeptide|length=176bp MRGLKITGGTFTESEADFGGFLYVEGDGTTSCKEASIEKHTGVDGGAIYAback to top mRNA from alignment at F-serratus_M_contig639:5663..6921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig639.17290.1 ID=mRNA_F-serratus_M_contig639.17290.1|Name=mRNA_F-serratus_M_contig639.17290.1|organism=Fucus serratus male|type=mRNA|length=1259bp|location=Sequence derived from alignment at F-serratus_M_contig639:5663..6921- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig639:5663..6921- >mRNA_F-serratus_M_contig639.17290.1 ID=mRNA_F-serratus_M_contig639.17290.1|Name=mRNA_F-serratus_M_contig639.17290.1|organism=Fucus serratus male|type=CDS|length=1056bp|location=Sequence derived from alignment at F-serratus_M_contig639:5663..6921- (Fucus serratus male)back to top |