prot_F-serratus_M_contig638.17284.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig638.17284.1
Unique Nameprot_F-serratus_M_contig638.17284.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length243
Homology
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.270e-49
Identity = 95/243 (39.09%), Postives = 148/243 (60.91%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++ + +++ GC I R+ +T  L+  Q  Y++SM+KRFDV+  +++PA+ GV    K D+ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  387 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 621          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.130e-48
Identity = 97/239 (40.59%), Postives = 143/239 (59.83%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAH 239
            ML A A   + +L HFD EQAF++++++E++Y+ +P+      G + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + DG   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H
Sbjct:   47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVH 277          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.770e-48
Identity = 97/243 (39.92%), Postives = 143/243 (58.85%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K     H D +QA+  A +DEE++++ P    E    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  ++VG+ E++ GC I R+ +   LK  Q  Y++SM+KRFDV+  +++PA+ GV    K D     E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  563 LMLAVANEKGVNFNHSDVKQAYTHATLDEEVFLKRPAGCGEKLRKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 797          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.410e-48
Identity = 93/243 (38.27%), Postives = 146/243 (60.08%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1067          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 5.450e-48
Identity = 94/243 (38.68%), Postives = 145/243 (59.67%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+     L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REAVG++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  424 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 658          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.610e-48
Identity = 93/243 (38.27%), Postives = 146/243 (60.08%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1446          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.640e-48
Identity = 93/243 (38.27%), Postives = 146/243 (60.08%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1232 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1466          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.670e-48
Identity = 93/243 (38.27%), Postives = 146/243 (60.08%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 243
            ++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1609          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.050e-47
Identity = 94/242 (38.84%), Postives = 145/242 (59.92%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKA 242
            +L A A  ++  LRHFD +QAF+++D+DE++++ +PE      G + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A
Sbjct:   23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRA 256          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KJF9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF9_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 3.230e-47
Identity = 93/239 (38.91%), Postives = 140/239 (58.58%), Query Frame = 0
Query:    1 MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAH 239
            ML A A   + +L HFD EQAF++++++E++Y+ +P+      G + +L K++YGL QA R W+      + A+GFEQ  AD CVFR +  G   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   R+++T  L   Q  + + +   + V     VP +SGV  LS  D        EE   FP+ E VG+LMW AT  RPDIA A+RAVAR+C +P   H
Sbjct:    1 MLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGEREKCDKFGADLNKSVPVKNLGELRWYSGCFYERSKETGRLTISQQTFTDELAAEYGVAGGKSVPMSSGV-KLSDFDA------DEEATDFPFCELVGSLMWLATQIRPDIANAIRAVARYCASPKRVH 231          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC10_9PHAE4.270e-4939.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE1.130e-4840.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBN2_9PHAE2.770e-4839.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE5.410e-4838.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE5.450e-4838.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE5.610e-4838.27Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE5.640e-4838.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.670e-4838.27Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JLN0_9PHAE1.050e-4738.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJF9_9PHAE3.230e-4738.91Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..171
e-value: 3.4E-34
score: 118.6
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 43..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig638contigF-serratus_M_contig638:383786..384514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig638.17284.1mRNA_F-serratus_M_contig638.17284.1Fucus serratus malemRNAF-serratus_M_contig638 383786..384523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig638.17284.1 ID=prot_F-serratus_M_contig638.17284.1|Name=mRNA_F-serratus_M_contig638.17284.1|organism=Fucus serratus male|type=polypeptide|length=243bp
MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLN
KAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVV
HVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRE
LKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKM
FPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2