mRNA_F-serratus_M_contig638.17284.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig638.17284.1
Unique NamemRNA_F-serratus_M_contig638.17284.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.370e-50
Identity = 97/246 (39.43%), Postives = 151/246 (61.38%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++ + +++ GC I R+ +T  L+  Q  Y++SM+KRFDV+  +++PA+ GV    K D+ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  384 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 621          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.400e-49
Identity = 96/245 (39.18%), Postives = 148/245 (60.41%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKA 735
            S+R+L A A  ++  LRHFD +QAF+++D+DE++++ +PE      G + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A
Sbjct:   20 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRA 256          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.820e-49
Identity = 96/246 (39.02%), Postives = 148/246 (60.16%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+     L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REAVG++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  421 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 658          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.010e-49
Identity = 95/246 (38.62%), Postives = 149/246 (60.57%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  830 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1067          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.090e-49
Identity = 95/246 (38.62%), Postives = 149/246 (60.57%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1209 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1446          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.100e-49
Identity = 95/246 (38.62%), Postives = 149/246 (60.57%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1229 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1466          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.110e-49
Identity = 95/246 (38.62%), Postives = 149/246 (60.57%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            SI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK  +++PA  G     K ++ +  E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct: 1372 SIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1609          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 4.540e-49
Identity = 97/240 (40.42%), Postives = 144/240 (60.00%), Query Frame = 1
Query:    7 RMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAH 726
            +ML A A   + +L HFD EQAF++++++E++Y+ +P+      G + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + DG   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H
Sbjct:   46 KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVH 277          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 8.710e-49
Identity = 98/246 (39.84%), Postives = 145/246 (58.94%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV 738
            S +++LA A  K     H D +QA+  A +DEE++++ P    E    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  ++VG+ E++ GC I R+ +   LK  Q  Y++SM+KRFDV+  +++PA+ GV    K D     E       +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+
Sbjct:  560 SNKLMLAVANEKGVNFNHSDVKQAYTHATLDEEVFLKRPAGCGEKLRKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 797          
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 2.880e-48
Identity = 96/245 (39.18%), Postives = 148/245 (60.41%), Query Frame = 1
Query:    1 SIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKA 735
            S+R+L A A  ++  LRHFD +QAF+++D+DE++++ +PE      G + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A
Sbjct:  194 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRA 430          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig638.17284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC10_9PHAE1.370e-5039.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE1.400e-4939.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE1.820e-4939.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE2.010e-4938.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.090e-4938.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.100e-4938.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.110e-4938.62Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JFG2_9PHAE4.540e-4940.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBN2_9PHAE8.710e-4939.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE2.880e-4839.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig638contigF-serratus_M_contig638:383786..384523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score158.3
Seed ortholog evalue4.5e-36
Seed eggNOG ortholog65672.G4TWW2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons1
Model size738
Cds size729
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931971.1253073-CDS-F-serratus_M_contig638:383785..3845141622931971.1253073-CDS-F-serratus_M_contig638:383785..384514Fucus serratus maleCDSF-serratus_M_contig638 383786..384514 -
1690964082.5423164-CDS-F-serratus_M_contig638:383785..3845141690964082.5423164-CDS-F-serratus_M_contig638:383785..384514Fucus serratus maleCDSF-serratus_M_contig638 383786..384514 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931971.1466424-UTR-F-serratus_M_contig638:384514..3845231622931971.1466424-UTR-F-serratus_M_contig638:384514..384523Fucus serratus maleUTRF-serratus_M_contig638 384515..384523 -
1690964082.5529864-UTR-F-serratus_M_contig638:384514..3845231690964082.5529864-UTR-F-serratus_M_contig638:384514..384523Fucus serratus maleUTRF-serratus_M_contig638 384515..384523 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig638.17284.1prot_F-serratus_M_contig638.17284.1Fucus serratus malepolypeptideF-serratus_M_contig638 383786..384514 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig638.17284.1

>prot_F-serratus_M_contig638.17284.1 ID=prot_F-serratus_M_contig638.17284.1|Name=mRNA_F-serratus_M_contig638.17284.1|organism=Fucus serratus male|type=polypeptide|length=243bp
MLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLN
KAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVV
HVDDILADAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRE
LKFDQHLYVESMIKRFDVKKEAKVPAASGVPTLSKADEPQSPEEKEEMKM
FPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAV
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mRNA from alignment at F-serratus_M_contig638:383786..384523-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig638.17284.1 ID=mRNA_F-serratus_M_contig638.17284.1|Name=mRNA_F-serratus_M_contig638.17284.1|organism=Fucus serratus male|type=mRNA|length=738bp|location=Sequence derived from alignment at F-serratus_M_contig638:383786..384523- (Fucus serratus male)
TCAATCCGGATGCTTTTGGCGACGGCAGCAGCCAAGGATGGGGAGCTGCG CCATTTCGACGCAGAGCAGGCGTTTTTGAAGGCGGACATCGACGAGGAGA TATACATAGAGATCCCCGAGGAGTTTCAGGAGTTTCCAGGGGCAGTAGGA CGGCTCAACAAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTGTTGGAA CAATAAGTTCTGTGACGACATGACGGCGATTGGGTTCGAGCAGGCAAAGG CGGACCCGTGCGTGTTCCGCAAGGTCGTCGACGGTGAGGCGGAGATGGTG GTGGTCGTGCACGTAGACGACATCCTGGCCGACGCAAAAGACAAAGCGAC GATGGATAGATTCGCGGCCGAGCTCGGTCAGAAGTTTAAGTTGAAGGACG TGGGGGACGCCGAATACTACATGGGCTGTCACATCACCCGGAACCGCAAG ACGCGCGAGTTAAAGTTCGACCAACACCTGTACGTGGAGTCGATGATAAA GAGGTTCGATGTCAAGAAGGAAGCCAAGGTACCGGCTGCGTCGGGGGTGC CGACGCTCTCAAAGGCGGATGAGCCGCAAAGCCCAGAGGAAAAGGAAGAG ATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCATGTGGACGGC GACGATGACACGGCCGGATATCGCGTGCGCCGTACGCGCTGTGGCCAGGT TCTGCGAAAACCCCGGGCCAGCGCACAAGAAGGCAGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig638:383786..384523-

>mRNA_F-serratus_M_contig638.17284.1 ID=mRNA_F-serratus_M_contig638.17284.1|Name=mRNA_F-serratus_M_contig638.17284.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig638:383786..384523- (Fucus serratus male)
ATGCTTTTGGCGACGGCAGCAGCCAAGGATGGGGAGCTGCGCCATTTCGA
CGCAGAGCAGGCGTTTTTGAAGGCGGACATCGACGAGGAGATATACATAG
AGATCCCCGAGGAGTTTCAGGAGTTTCCAGGGGCAGTAGGACGGCTCAAC
AAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTGTTGGAACAATAAGTT
CTGTGACGACATGACGGCGATTGGGTTCGAGCAGGCAAAGGCGGACCCGT
GCGTGTTCCGCAAGGTCGTCGACGGTGAGGCGGAGATGGTGGTGGTCGTG
CACGTAGACGACATCCTGGCCGACGCAAAAGACAAAGCGACGATGGATAG
ATTCGCGGCCGAGCTCGGTCAGAAGTTTAAGTTGAAGGACGTGGGGGACG
CCGAATACTACATGGGCTGTCACATCACCCGGAACCGCAAGACGCGCGAG
TTAAAGTTCGACCAACACCTGTACGTGGAGTCGATGATAAAGAGGTTCGA
TGTCAAGAAGGAAGCCAAGGTACCGGCTGCGTCGGGGGTGCCGACGCTCT
CAAAGGCGGATGAGCCGCAAAGCCCAGAGGAAAAGGAAGAGATGAAGATG
TTCCCGTACCGAGAGGCAGTGGGGGCGCTCATGTGGACGGCGACGATGAC
ACGGCCGGATATCGCGTGCGCCGTACGCGCTGTGGCCAGGTTCTGCGAAA
ACCCCGGGCCAGCGCACAAGAAGGCAGTGATGCTTTTGGCGACGGCAGCA
GCCAAGGATGGGGAGCTGCGCCATTTCGACGCAGAGCAGGCGTTTTTGAA
GGCGGACATCGACGAGGAGATATACATAGAGATCCCCGAGGAGTTTCAGG
AGTTTCCAGGGGCAGTAGGACGGCTCAACAAGGCCATTTACGGACTCGTG
CAGGCGGGGAGGTGTTGGAACAATAAGTTCTGTGACGACATGACGGCGAT
TGGGTTCGAGCAGGCAAAGGCGGACCCGTGCGTGTTCCGCAAGGTCGTCG
ACGGTGAGGCGGAGATGGTGGTGGTCGTGCACGTAGACGACATCCTGGCC
GACGCAAAAGACAAAGCGACGATGGATAGATTCGCGGCCGAGCTCGGTCA
GAAGTTTAAGTTGAAGGACGTGGGGGACGCCGAATACTACATGGGCTGTC
ACATCACCCGGAACCGCAAGACGCGCGAGTTAAAGTTCGACCAACACCTG
TACGTGGAGTCGATGATAAAGAGGTTCGATGTCAAGAAGGAAGCCAAGGT
ACCGGCTGCGTCGGGGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAA
GCCCAGAGGAAAAGGAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTG
GGGGCGCTCATGTGGACGGCGACGATGACACGGCCGGATATCGCGTGCGC
CGTACGCGCTGTGGCCAGGTTCTGCGAAAACCCCGGGCCAGCGCACAAGA
AGGCAGTG
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