prot_F-serratus_M_contig637.17277.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig637.17277.1
Unique Nameprot_F-serratus_M_contig637.17277.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length314
Homology
BLAST of mRNA_F-serratus_M_contig637.17277.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 4.130e-64
Identity = 136/315 (43.17%), Postives = 176/315 (55.87%), Query Frame = 0
Query:    1 ASPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSL-SCSDSAFGCTRRYAFGSLQKSFVSKLKRAYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQAPLILRPDFQHLMRDMHTGLLYAAQPGVRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSSQGLVLNFHFTKTLRDGAAHASLLAPDNDMPETCAVAAMLRYAQAAESCDWDMSKGYLFPEIQDSGKHTPKRLARPLSAKAMAARFKEHLGRAGLGARQFTFHSFRVGCAVTQTIAGKDIAEIMAAVNWKSEKTVRRY 314
            ASP+ VV+W  +LDSQG GT +VH  +C  VG     SCS  A  C +RY   SL+K F SKLK AY E LGR +DW+P    GNP     VD YL FTT+EQ R GVT KQA  +L      L+  M    L +     R+A  RD+ALF++A  +  RG DL+  L +QVL LP S+G + NF F KTLR       +LA  N   + CAV A+  Y  AA+   WD+S GYLFP + D G     +L     A  M +  + HL  A L A  F+ HSFRVG ++++++ G  I EIM    WK+E   + Y
Sbjct:  716 ASPDDVVDWFSYLDSQGKGTKLVHDATCAGVGSSDRRSCSPGAT-CKKRYGAESLRKGFYSKLKMAYKEQLGRGDDWNPTVGSGNPCASPTVDAYLTFTTEEQKRVGVTAKQAAPLLEDTLGELLPHMRLRALASDSMAERIAITRDVALFSLAHHSMRRGFDLSFTLGSQVLRLPESRGFIFNFLFGKTLRASTEAIVVLASTNR--DVCAVRAVAEYILAAQQVGWDLSSGYLFPSVLDDGSRGNSKLV----ATQMTSSLQAHLRAASLPAH-FSMHSFRVGGSLSRSMGGSAIEEIMQIGGWKTESMAKYY 1022          
BLAST of mRNA_F-serratus_M_contig637.17277.1 vs. uniprot
Match: UPI00148A6DEA (uncharacterized protein LOC117691581 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A6DEA)

HSP 1 Score: 104 bits (260), Expect = 1.990e-21
Identity = 93/319 (29.15%), Postives = 141/319 (44.20%), Query Frame = 0
Query:    2 SPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSLSCSDSAFGCTRRYAFGSLQKSFVSKLKRAYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQA-PLIL---RPDFQHLMRDMHTGLLYAAQPGVRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSSQGLVLNFHFTKTLRDGAAHASLLAPDNDMPETCAVAAMLRYAQAAESCDWDMSKGYLFPEIQDSGKHTPKRLARPLSAKAMAARFKEHLGRAGLGARQFTFHSFRVGCAVTQTI--AGKDIAEIMAAVNWKSEKTVRRY 314
            +P  +  +L + D  G   T VH+  C Q+G       DS   C +R A  S+ ++ +  L    +E+ GR   +      GNP     +  YL    +EQ +A + PKQA P  L       + + R++    L   +   R    RD ALF + F AG R +D+A  L  +V +L    G   N  F KTLR      + +         C V  + RY   A+    DMS GYLF  + +SG+     +  P+S  ++  R K +L   G+   + T HS R GCAV      A  D+ ++M  V W +E + + Y
Sbjct:  181 TPHDIKRFLVWKDRFGK--TTVHSYKCKQLGI----TGDSTCKCPKRLAAASV-RNIIQHLVDI-LELEGRGRAYDEYCGVGNPAASVQIKGYLKCVQEEQAKAHILPKQAKPFFLTKLETISKFISRELGRSDLTLKE---RFVLIRDQALFKLQFFAGDRASDIAITLLQEVKYLRKKDGFAFNHTFGKTLRGNGKTNTFVIKCCPNETICPVRGLERYFAEAKRLGIDMSSGYLFRMVTESGRV----INEPMSYSSIYERLKCYLITLGIDEGE-TPHSLRAGCAVHMCFSNAAHDVHDLMNHVGWATESSAKYY 483          
BLAST of mRNA_F-serratus_M_contig637.17277.1 vs. uniprot
Match: A0A8B6BYV7_MYTGA (ALOG domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BYV7_MYTGA)

HSP 1 Score: 82.0 bits (201), Expect = 4.250e-14
Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = 0
Query:  137 PGVRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSSQGLVLNFHFTKTLRDGAAHA-SLLAPDNDMPETCAVAAMLRYAQAAESCDWDMSKGYLFPEIQDSGKHTPKRLARPLSAKAMAARFKEHLGRAGLGARQFTFHSFRVGCAVTQTIA--GKDIAEIMAAVNWKSEKTVRRY 314
            P V      D A F + + AG R +DL+ ++A +V  L    G V    F KTLR     + S +    D    C V  +L + Q A SC+ D++KGYLF  + +SG+     L +P+S   +  R + +L   G+   + T HSFR GC VT  ++    ++ E+M  V W  + +   Y
Sbjct:  109 PAVSPVIKEDQAWFKLQYFAGDRASDLSIVVAQEVKFLKDGSGFVFQHTFGKTLRGKKGRSNSFVIKRCDDNVVCPVKGLLDFVQFAHSCNVDLTKGYLFRVVSESGRV----LEKPVSYSVVYERLRYYLSTLGIYEGE-TPHSFRSGCTVTMALSDSASNVDEVMNHVGWFGKASAEYY 284          
BLAST of mRNA_F-serratus_M_contig637.17277.1 vs. uniprot
Match: UPI001458CB97 (uncharacterized protein LOC117330000 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458CB97)

HSP 1 Score: 73.6 bits (179), Expect = 1.150e-11
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 0
Query:  145 RDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSSQGLVLNFHFTKTLRDGAAHASLLAPDN-DMPETCAVAAMLRYAQAAESCDWDMSKGYLFPEIQDSGKHTPKRLARPLSAKAMAARFKEHLGRAGLGARQFTFHSFRVGCAVTQTIAGK-DIAE-IMAAVNWKSEKTVRRY 314
            RD A F + F AG R +DL+ ++  ++  L  + GLV    F KTLR     ++       D    C V  +L + Q A+S   D++ GYLF  + DSG+   K +    S   +  R + +L   GL   + T HSFR GCAVT  ++G  D AE +M  + W ++++   Y
Sbjct:   43 RDQAWFKLQFFAGDRASDLSVIVTQEIKVLNDNSGLVFQHTFGKTLRGSKGRSNTFVIKLCDDKLVCPVRGLLDFLQFAKSSGVDLTTGYLFRVVSDSGRVLDKHV----SYSVVYERLRYYLVVLGLYEGE-TPHSFRSGCAVTMALSGSVDHAEQMMTHLGWFTKESAEYY 210          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig637.17277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JIS8_9PHAE4.130e-6443.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
UPI00148A6DEA1.990e-2129.15uncharacterized protein LOC117691581 n=1 Tax=Crass... [more]
A0A8B6BYV7_MYTGA4.250e-1431.49ALOG domain-containing protein n=1 Tax=Mytilus gal... [more]
UPI001458CB971.150e-1132.95uncharacterized protein LOC117330000 n=1 Tax=Pecte... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 142..314
e-value: 8.5E-8
score: 32.2
IPR006936ALOG domainPFAMPF04852DUF640coord: 2..95
e-value: 2.9E-6
score: 27.4
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 120..314
e-value: 8.5E-25
score: 89.7
NoneNo IPR availablePANTHERPTHR34605FAMILY NOT NAMEDcoord: 145..308
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 136..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig637contigF-serratus_M_contig637:342851..343792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig637.17277.1mRNA_F-serratus_M_contig637.17277.1Fucus serratus malemRNAF-serratus_M_contig637 342851..343792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig637.17277.1 ID=prot_F-serratus_M_contig637.17277.1|Name=mRNA_F-serratus_M_contig637.17277.1|organism=Fucus serratus male|type=polypeptide|length=314bp
ASPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSLSCSDSAFGCTRRYA
FGSLQKSFVSKLKRAYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQ
EQLRAGVTPKQAPLILRPDFQHLMRDMHTGLLYAAQPGVRLAYARDMALF
AVAFRAGSRGNDLAKLLAAQVLHLPSSQGLVLNFHFTKTLRDGAAHASLL
APDNDMPETCAVAAMLRYAQAAESCDWDMSKGYLFPEIQDSGKHTPKRLA
RPLSAKAMAARFKEHLGRAGLGARQFTFHSFRVGCAVTQTIAGKDIAEIM
AAVNWKSEKTVRRY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002104Integrase_catalytic
IPR006936ALOG_dom
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz