prot_F-serratus_M_contig637.17275.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig637.17275.1
Unique Nameprot_F-serratus_M_contig637.17275.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length562
Homology
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BLAST of mRNA_F-serratus_M_contig637.17275.1 vs. uniprot
Match: A0A6N9ATD9_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9ATD9_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.840e-5
Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:  326 EKLALDNFFVSMGGNDWFVNRGWAERTLALGDRFGVTL-EDGHVTKLILATNNLRGCLSDDMVDCEHLRELVLHGNNIFGGVPP 408
            E+ ALD+ + + GG +W  + GWA  +  +G  +GVT  EDG VT L LA NNLRG L D +    +L  L L GN   GG  P
Sbjct:  706 ERTALDDIYSNTGGMNWAQSEGWAS-SQHVGAWYGVTTNEDGRVTHLKLAENNLRGRLPDYIQFLPYLTHLDLSGNPYLGGPLP 788
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig637.17275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6N9ATD9_9BACT1.840e-544.05Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 322..411
e-value: 4.9E-9
score: 36.9
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 360..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig637contigF-serratus_M_contig637:260206..301309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig637.17275.1mRNA_F-serratus_M_contig637.17275.1Fucus serratus malemRNAF-serratus_M_contig637 260107..302486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig637.17275.1 ID=prot_F-serratus_M_contig637.17275.1|Name=mRNA_F-serratus_M_contig637.17275.1|organism=Fucus serratus male|type=polypeptide|length=562bp
MAEVLALRLGSWVTAMAIEHLVEYFSDSLGQGVGKGIGKWSKTLKEMIAS
AEEEAIQGMHNDMHVGMAALSASISAVNQETKDGTKAVLDKLVELRESQH
HDQQLANLQRAVDAIGDLTSHMYAPGNPKNIFLLEKASKSAEEAARSTNG
NFLTKLQAFRLWVVTEYMHEVTTANGECTQAKMTALNILGRVIIKDKDII
EICRKYSSPRSFKEATAPELVIPEQPEETGWPSWSEDEEHPEGLSETMDF
LFDITSSVSMLPPLDREVTCRNLITTGVSGSLTLGPDVPHDVIFAMGRYC
ATNSHLSRTYAAVSAVALEAWDAGKEKLALDNFFVSMGGNDWFVNRGWAE
RTLALGDRFGVTLEDGHVTKLILATNNLRGCLSDDMVDCEHLRELVLHGN
NIFGGVPPRLQGFIDGKPEMVVTGLPGRGVTCPPFHSLETSNVFRPGVGR
RPFTIPPSAASSAPTPRVDNTTPGHRSFLFLSSSGKSTSRPEHSSSDTSI
PPNGQKKKSLFKKASKFIKTAMALNFGAGDETSCPECGDKTTPIGSQRVC
RRCNPGDPQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf