mRNA_F-serratus_M_contig634.17243.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 268 bits (684), Expect = 7.120e-82 Identity = 143/239 (59.83%), Postives = 174/239 (72.80%), Query Frame = 1
Query: 28 SNGPELVLEAECSWSKIGERVIDHGRTCLAIVGDGTVGQAE-RCLFELRKARICSYKKIKANRHKIYRTNGINCAVFTTRGPYPTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGGCKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGANVRCLVWHPEDEVLVPLAASPAERKAESVRVALVDPRMCAFLTKPQTLAMALTALASCIDAVVAWE 741
S P+L++EA+CSW+K+ +V HGRTCLAI D T GQA RCLFELRKA GINCA+FT RG YPT +GIDEAREMA RIGA CI +G GG +DT+KA ARLH+SSGGCKQ+L SP VLM E+G S+PRTP G++LPL+ +PTS+GAGA AN RCLVWHP+DEVLVPLA + ES+ VALVDP +C L+K QT AMALTAL++C+DA++A E
Sbjct: 17 SPSPKLIVEADCSWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKA-------------------GINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDG-HSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLA-----EEGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARE 230
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: W7TPR3_9STRA (Iron-containing alcohol dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPR3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 8.410e-13 Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 235 GINCAVFTTRGPYPTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGG-CKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGA-NVRCLVWHPEDEVLVPLAASPAERKAESVRVALVDPRMCAFLTKPQTLAMALTALASCIDAVV 732
GI C F+ YPT + +DE +MA R+GA I G+GGGG +D +K A L + G + YL+ + +E S+ R LP++ VPT++ AG G +CL + +E LVPL A + +A+VDP + L +MAL A + C DA++
Sbjct: 95 GIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLR-----VFHKEKELSDQR------LPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDL-----APDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALL 246
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: A0A7C1K958_9FIRM (Iron-containing alcohol dehydrogenase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C1K958_9FIRM) HSP 1 Score: 62.0 bits (149), Expect = 8.460e-7 Identity = 72/293 (24.57%), Postives = 108/293 (36.86%), Query Frame = 1
Query: 37 PELVLEAECSWSKIGERVIDHGRTCLAIVGDGTV---GQAERCLFELRKARICSYKKIKANRHKIYRTNGINCAVFTTRGPYPTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGGCKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGA---------------NVRCLVWHPEDEVLVPLAASPAERKAESVRVALVDPRMCAFLTKPQTLAMALTALASCIDAVVAWEK*PRVLIYNREMKTIHCSSSPSTVFVAWRRACRLRWWKEK 861
P VL S ++GE + GR L + G ++ G ER A+I +T P PTV+ +DE R++ G + G+GGG V+D +KA A L + Y + P + G LP I VPT++G+G+ A ++RC WHP VA+VDP + + + T A + AL I+A + P R+ T+ + AW RLR +EK
Sbjct: 8 PARVLFGPGSTYRLGEEAVRFGRRGLMVTGKKSLKETGNFERVTRPFTDAKI-------------------ELVFYTEVEPEPTVDTVDEVRQLIRESGCTFVVGVGGGSVLDVAKAAAGLFGEDEPVRAYFEKP----VTRPG------------LPWIAVPTTAGSGSEATTNAVLIDRERGRKQSLRCESWHPA--------------------VAVVDPILTMSMPRTLTAATGMDALTHAIEAFTSRWSNPFTQALARQAVTLISHH----FYTAWNVG-RLREAREK 240
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: A0A328SGS9_9EURY (Alcohol dehydrogenase (Fragment) n=1 Tax=Methanosphaera sp. rholeuAM270 TaxID=1945577 RepID=A0A328SGS9_9EURY) HSP 1 Score: 57.0 bits (136), Expect = 1.630e-5 Identity = 48/184 (26.09%), Postives = 79/184 (42.93%), Query Frame = 1
Query: 37 PELVLEAECSWSKIGERVIDHGRTCLAIVGDGTV---GQAERCLFELRKARICSYKKIKANRHKIYRTNGINCAVFTTRGPYPTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGGCKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGANVRCLVWHPEDE 579
P +L S ++ E + + +AI G++ GQ + + EL A G+ +F P PT +DEA +A++ G + +GGG VMD SKA A + + G C Y S A G K P + LPL+ + TS+G G+ ++ ++ + E +
Sbjct: 10 PTRILYGAGSLKRLHEEELPGHKALIAISQGGSMKRHGQLDALVAELGAA-------------------GVGYVLFDQVRPNPTAGNVDEAAALAVQEGCDFVVALGGGSVMDASKAIAIVATNEGSCWDYAPS------ASGGQK----VPEAAPLPLVCITTSAGTGSEVDMWSVISNDETQ 164
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: UPI00042578DD (iron-containing alcohol dehydrogenase n=1 Tax=Propionicicella superfundia TaxID=348582 RepID=UPI00042578DD) HSP 1 Score: 57.8 bits (138), Expect = 1.920e-5 Identity = 54/155 (34.84%), Postives = 72/155 (46.45%), Query Frame = 1
Query: 274 PTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGGCKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGANVRCLVWHPEDEVLVPLAASPAERKAESVR-VALVDPRMCAFLTKPQTLAMALTALASCIDAVVA 735
PTVE + +A A A + IGGG V+DTSKA A L + G Y + V+ A RT S+PL+ VPT+SG G+ A +V E V V L R + VALVDP + T + L AL CI+ +V+
Sbjct: 61 PTVEVVRDALAAARAQDADLVVAIGGGSVIDTSKAVAALLGNGGDPLDYAE----VIGAG-------RTLTRPSVPLVAVPTTSGTGSEATANAVVGSVEHGVKVSL------RSVHMLPDVALVDPELVVDCPPHVTASAGLDALTQCIEPLVS 198
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Match: A0A0S8CMU0_9BACT (Fe-ADH domain-containing protein n=1 Tax=Nitrospira bacterium SG8_3 TaxID=1704023 RepID=A0A0S8CMU0_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 2.510e-5 Identity = 45/165 (27.27%), Postives = 73/165 (44.24%), Query Frame = 1
Query: 250 VFTTRGPYPTVEGIDEAREMAIRIGAGCIAGIGGGGVMDTSKATARLHASSGGCKQYLKSPSAVLMAEEGSKSEPRTPVGSSLPLIMVPTSSGAGAGANVRCLVWHPEDEVLVPLAASPAERKAESV---RVALVDPRMCAFLTKPQTLAMALTALASCIDAVVA 735
VF PTVEG+++A E+ ++ G + +GGG V+DTSKA A QY + P + A + P+I +PT++G G+ + HP+ ++ PA +VA+ DP + L T + AL C++A +A
Sbjct: 61 VFDEAPENPTVEGVEKALEIYVQEGCDGLVAVGGGSVIDTSKAVALRAGHDAPISQYERQPEKITDA--------------TAPIIAIPTTAGTGSELTFGAGI-HPD-------SSKPAMNLGSFYFIPKVAICDPELTLTLPPALTAGTGMDALGQCVEAYLA 203 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig634.17243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig634.17243.1 >prot_F-serratus_M_contig634.17243.1 ID=prot_F-serratus_M_contig634.17243.1|Name=mRNA_F-serratus_M_contig634.17243.1|organism=Fucus serratus male|type=polypeptide|length=249bp RHFASVFRRSNGPELVLEAECSWSKIGERVIDHGRTCLAIVGDGTVGQAEback to top mRNA from alignment at F-serratus_M_contig634:360363..363924+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig634.17243.1 ID=mRNA_F-serratus_M_contig634.17243.1|Name=mRNA_F-serratus_M_contig634.17243.1|organism=Fucus serratus male|type=mRNA|length=3562bp|location=Sequence derived from alignment at F-serratus_M_contig634:360363..363924+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig634:360363..363924+ >mRNA_F-serratus_M_contig634.17243.1 ID=mRNA_F-serratus_M_contig634.17243.1|Name=mRNA_F-serratus_M_contig634.17243.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig634:360363..363924+ (Fucus serratus male)back to top |