mRNA_F-serratus_M_contig634.17232.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig634.17232.1
Unique NamemRNA_F-serratus_M_contig634.17232.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A6H5JHA5_9PHAE (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA5_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 2.290e-135
Identity = 242/417 (58.03%), Postives = 279/417 (66.91%), Query Frame = 2 
Query:  365 ALSFLPPAVAPQRATGAAVLTRPLSVETKRLGSTPQLII---------------ERDKCRPAVRSPPLRLSLSKPSSSK-FTGRKTGGSTARPTAGASGSGG-ETLEMGCGGVDG-GMTSTLTWMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQ-------------------------------------PRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGEDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            ALS L PAVAP+  T A  +   +      L +TP+  +               ER +CRP VR+ PLR +++KPS ++ F        T  P++ ++ +G  +T EM CGG    GM S  TW+ESVNSTMDE KTL++ Q+GS A  VF VAAREQL+GRGTKGRAW+GLPGNVFLTVAIPL+RVPVPLSLIPLRVGTLIAPEIQR L        P  R+  +P L PP                                      PRVSLKWPNDVLL G KVAGVLIEAELPFLLVGIGVNVRNKP+V Q GPDRGRPA CLA++G DSTD+AVR LSA LT+KLCSWASG DSA  A+AEWSRWVDW+LPL+IRDEGR VRPVGVAPDG LRV+DP TG EELL TEYLL
Sbjct:  153 ALSSLAPAVAPRAGTSALFVVSSVDPAVS-LATTPEATLAGSAAAGAEGSVVAAERARCRPLVRTTPLRFNVAKPSRTEIFLAPSANIRTPGPSSSSADTGSADTTEMRCGGXXXXGMISRFTWLESVNSTMDEVKTLIINQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRL--------PRHRQEERPPLYPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPATCLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVMDPATGEEELLATEYLL 560
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: D7FRR2_ECTSI (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR2_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.640e-129
Identity = 211/309 (68.28%), Postives = 228/309 (73.79%), Query Frame = 2 
Query:  635 MGCGGVDGG----MTSTLTWMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQ---------------------------------PRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGEDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            M CGG        M S  TW+ESVNSTMDE KTL+V Q+GS A  VF VAAREQL+GRGTKGRAW+GLPGNVFLTVAIPL+RVPVPLSLIPLRVGTLIAPEIQR L        P  R+  +P L PP                                  PRVSLKWPNDVLL G KVAGVLIEAELPFLLVGIGVNVRNKP+V Q GPDRGRPAACLA++G DSTD+AVR LSA LT+KLCSWASG DSA  A+AEWSRWVDW+LPL+IRDEGR VRP+GVAPDG LRVVDP TG EELLTTEYLL
Sbjct:    1 MRCGGXXXXXXXXMVSRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRL--------PRHRQEERPPLSPPXXXXXXXREARTAEAAEXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPIGVAPDGRLRVVDPATGEEELLTTEYLL 301
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: F0Y9I2_AURAN (Uncharacterized protein BPL2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I2_AURAN)

HSP 1 Score: 186 bits (471), Expect = 3.500e-50
Identity = 117/263 (44.49%), Postives = 145/263 (55.13%), Query Frame = 2 
Query:  680 WMESVNSTMDEAKTLVVKQQGSGANGVFG----VAAREQLKGRGTKGRAWVGLP-GNVFLTVAIPLERVPV-PLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGEDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            W+    ST D AK ++ ++    +NG  G    VA   Q  GRGT+GR W     GNV LTVA+ +  +P+ P++L+PLRVG     E+ R L      A              P   VSLKWPNDVLL+G KV GVLIEA+   LLVG+G+NV   PDV Q GP+RGR A  LA  G  S D    A++  L   L +WA G D A   +A WS +VDW+LPL +RD   VV PV + PDG LRV     G E  L  EYLL
Sbjct:   33 WLRETKSTQDAAKQILKQRVVGNSNGHDGKHVAVATAHQTAGRGTRGRTWNDDGRGNVALTVALDMRHLPLKPVTLVPLRVGV----EVARVLADHLEDA--------------PGCAVSLKWPNDVLLNGKKVCGVLIEADGDALLVGVGINVATHPDVPQAGPERGREATSLAACGATSAD--AEAIAKDLAAHLSTWADGVDDAPTLVAHWSHFVDWSLPLTLRDTSEVVSPVRLLPDGRLRVRPAAGGPERDLVAEYLL 275
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A7S1ZSF1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZSF1_TRICV)

HSP 1 Score: 185 bits (470), Expect = 4.080e-50
Identity = 114/283 (40.28%), Postives = 168/283 (59.36%), Query Frame = 2 
Query:  656 GGMTSTLT--WMESVNSTMDEAKTLVVK--QQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERV-PVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAEL------PFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYG----GDSTDQAVRALSATLTDKLCSWAS-GEDSAELALAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            GG TS +   ++ +V ST DEAK ++ +   +G  +   F V+A EQ  GRGTKGR W+G PGN F+T+ +P + + P+P++L+PL++GT++A  I R  R      A                RV +KWPNDVL++  KVAG LIE+         + L+GIGVNV + P ++Q GP RGR A CL+E+G    GD T+ + R L+A L +++ +WA+ G+ +AE  + EW  W D+     +RD  E  VV P+ + PDG L+V   D G+ +LL T+YLL
Sbjct:    5 GGRTSLVPIHYLGTVGSTQDEAKRILQEYANKGDDSPDCFAVSANEQNHGRGTKGRDWIGRPGNCFVTICLPCDLITPLPVTLLPLKIGTIVATHIDRAFRSVGVHGA----------------RVRVKWPNDVLINDGKVAGALIESHCNPETLRSWYLIGIGVNVAHAPTIYQFGPQRGRQATCLSEHGSFVKGDGTNDS-RTLAADLAEEVHAWATEGDMTAEGVVREWEAWADFGREQVLRDKPENEVVVPLAIEPDGRLKVRGAD-GKIQLLCTDYLL 269
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A7S1GL90_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL90_CYCTE)

HSP 1 Score: 182 bits (462), Expect = 1.730e-48
Identity = 103/263 (39.16%), Postives = 147/263 (55.89%), Query Frame = 2 
Query:  683 MESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAEL----PFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDST---DQAVRALSATLTDKLCSWASGED-SAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1447
            ++   ST D AKTL+ ++ G+  + ++ V    Q  GRGT GR W+   GNVFLT+A+P+  +PVP++L+PL++G L+A  + +   Q        G E  QP         ++KWPNDVL + +K+AG+LIE+ +     +LLVGIGVN+   P V  +GPD+GRPA CL  Y        +      S  L      W    D SAE   +EW RW +W  PLQIR+ G  V P+ +  DG LRV +  +G+E LL  +YL
Sbjct:   57 VQEAESTQDLAKTLI-ERGGAEDDHLWVVTTDNQTHGRGTTGRTWISRKGNVFLTIAVPMTSIPVPITLLPLQMGVLVAERLDKIYHQLKPDDEEDGSERLQP---------TVKWPNDVLFNDEKIAGILIESHVVENVTWLLVGIGVNLLQTPQVPTEGPDKGRPATCLQHYVSHDVLLPESLAEVFSHDLAVAFEQWLDDSDVSAEQVRSEWKRWANWAKPLQIRETGEAVFPMDIEADGRLRVKEM-SGKERLLVADYL 308
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: W7TWD4_9STRA (Biotin lipoate protein ligase-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWD4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.480e-46
Identity = 123/289 (42.56%), Postives = 160/289 (55.36%), Query Frame = 2 
Query:  620 GETLEMGCGGVDGGMTSTLTWMESVNSTMDEAKTLVV--KQQGSGANGVFGVA--AREQLKGRGTKGRAWVGLPGNVFLTVAIP---LERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAE--LPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYG--GDSTDQAVRALSATLTDKLCSWASG--EDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1447
            GE +E+G G +         W+  V ST D  +TL+   ++      GV  +A  A  Q++GRGT GRAW+G  GN+FLTVA+P   L  +  P++L+PLR+GTLIA EI R L                P+    Q RV LKWPNDVLLD  KV+G+LIE +    + LVGIGVNV   P V   G DRGR AACLA+ G  G   D A R LS  +   + +W  G  ED+A+  +A+W +   W     +RD G VV P+ +  DG LRV D  +G   LLT EYL
Sbjct:   90 GEDIEVGDGTL-----LHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRIL--------------PHPEA---QARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTA-RDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVV-PLALETDGRLRVRDLTSGATRLLTAEYL 354
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A7S0GLW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLW3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.560e-44
Identity = 105/268 (39.18%), Postives = 146/268 (54.48%), Query Frame = 2 
Query:  761 FGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELP-----FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEY------GGDSTDQAV-------------RALSATLTDKLCSWASGED------------SAELALAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            F ++  EQ KGRGT GR W+   GN FLTVAIP++ VPVPL+L+PL+VG++IA +++  L       + G  + A          VS+KWPNDVL+DG K+AGVLIE+        + ++G+GVNV   P V   G +RGR + C+ ++      GGDS +  V              AL+  +   +CSW    D            +A++ L EW  WVDW   L +RD  +  ++ P+GV PDG LRV   D GRE LL  +YLL
Sbjct:   11 FAISTSEQKKGRGTSGRVWISSKGNSFLTVAIPMDSVPVPLTLLPLKVGSIIATQVKELL------ISCGASDAAN--------NVSVKWPNDVLVDGGKIAGVLIESATDQTYQTWFMIGVGVNVAVAPAVDTAGENRGRRSTCVKDHCLKCNSGGDSFENNVDKDHSFGDGMEEATALANNIARDICSWIYYADEISEQGSNNKDANAKILLNEWREWVDWEKELVVRDSTDNEIIVPLGVEPDGQLRVRGQD-GRERLLMVDYLL 263
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A8J2WZ73_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ73_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.260e-43
Identity = 103/258 (39.92%), Postives = 144/258 (55.81%), Query Frame = 2 
Query:  680 WMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLP-GNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGEDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            W+E+  STMD AK L+ K++G        VA   Q KGRGT+GR+W     GNV LTVA P E    P++L+PLRVGT++   +  +                         R+SLKWPNDVLL+G KVAG+L+E++   + VG+GVNV + P V   GPDRGR AA +    GD+      A++ ++ D L +W+   D A   + +WS  VDW   L++R+ G +V+PV + PDG L+V     G E  L  +YLL
Sbjct:   36 WLETTPSTMDAAKDLL-KERGDTDARPLAVATAHQTKGRGTRGRSWTDDGRGNVALTVAFPSEIPLAPITLLPLRVGTVVIDALNDS-------------------------RLSLKWPNDVLLEGGKVAGILVESDGNAIYVGVGVNVASAPAVPSAGPDRGRRAAKIP---GDAF-----AIAQSIADGLGAWSQDRDDATSVITDWSARVDWAADLELRETGELVKPVRLLPDGRLKV--RGAGGERALVADYLL 257
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A7S2U6B7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6B7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.270e-42
Identity = 102/265 (38.49%), Postives = 150/265 (56.60%), Query Frame = 2 
Query:  698 STMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPV-PLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELP----FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTD----QAVRALSATLTDKLCSWASGE----DSAELALAEWSRWVDWTLPLQIRDEG--RVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1447
            ST DEA+ L++ +  S A+  F V A EQ +GRGT GR+W+G  GNVFLTV I  E VP+ P++L+PL++G L+A  I   ++     ++  G              V++KWPNDVL+DG KVAG+LIE  +     + LVGIG+NV   P +  QGP+ GRP+AC+ +Y G S      +   AL+  + + + +W        +++   + EW  W +    L +RD+     V P+G+ PDG LRV D + GRE  L  +YL
Sbjct:  105 STQDEARRLIMDELSS-AHDNFAVLATEQTRGRGTCGRSWIGRKGNVFLTVGIKSEEVPIHPITLVPLKMGVLVARAIHDRIQNSGNSSSGKGTC-----------AVTVKWPNDVLVDGKKVAGILIENFIHDNQVWFLVGIGINVAEAPAIDSQGPEGGRPSACILDYCGSSATINATEECNALATQIANSVHTWVQNSTGQYETSRDVVKEWEEWAELGKELFLRDDASREPVIPLGIEPDGRLRVRDRN-GRERFLVADYL 356
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BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Match: A0A7S1BNJ6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNJ6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.670e-42
Identity = 103/268 (38.43%), Postives = 151/268 (56.34%), Query Frame = 2 
Query:  689 SVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRSTPAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELP------FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQ-AVRALSATLTDKLCSW---ASGEDSAELA--LAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1450
            +V+ST DE + LV + +   A G   V A  Q  GRGT GR W+G  GN+FLTVA+P+  VPV  +L+PL+VG ++A  ++R L + S               +  + +V+LKWPNDVL+D  K+AGVLIE E        + L+GIGVNV + P++   G +RGRPA CL ++     D+ ++     ++   + +W      E  AE A  L EW  + ++  PL+IRD     +V P+ +  DG LRV+  D G+E LL  +YLL
Sbjct:  108 AVDSTQDECRALV-RSRAPDAVGAVAVTATRQTGGRGTNGRKWIGRSGNLFLTVAVPINAVPVTPTLLPLKVGVIVASNVRRVLLESS---------------LNERSKVTLKWPNDVLIDDKKIAGVLIENEYQKNYNDGWFLIGIGVNVASAPEIPNVGEERGRPATCLGDHMEGGLDEGSLLRFGESIAGDISTWIFKTVDEKEAESAKILEEWRGFANFGKPLKIRDGPSNEMVIPLDIESDGRLRVLG-DNGKERLLAADYLL 358
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig634.17232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHA5_9PHAE2.290e-13558.03BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
D7FRR2_ECTSI1.640e-12968.28BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
F0Y9I2_AURAN3.500e-5044.49Uncharacterized protein BPL2 n=1 Tax=Aureococcus a... [more]
A0A7S1ZSF1_TRICV4.080e-5040.28Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1GL90_CYCTE1.730e-4839.16Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
W7TWD4_9STRA7.480e-4642.56Biotin lipoate protein ligase-like protein n=1 Tax... [more]
A0A7S0GLW3_9STRA1.560e-4439.18Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J2WZ73_9STRA1.260e-4339.92Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2U6B7_9STRA1.270e-4238.49Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1BNJ6_9STRA4.670e-4238.43Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig634contigF-serratus_M_contig634:23079..28129 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.9
Seed ortholog evalue2.1e-106
Seed eggNOG ortholog2880.D7FRR2
KEGG rclassRC00043,RC00070,RC00096,RC02896
KEGG koko:K03524
KEGG ReactionR01074,R05145
KEGG Pathwayko00780,ko01100,map00780,map01100
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Biotin/lipoate A/B protein ligase family
EggNOG OGs2SA0E@2759,COG0340@1
Ec32 ortholog descriptionBiotin/lipoate A/B protein ligase
Ec32 orthologEc-00_003530.1
EC6.3.4.15
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000
Exons6
Model size2067
Cds size1398
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig634.17232.1prot_F-serratus_M_contig634.17232.1Fucus serratus malepolypeptideF-serratus_M_contig634 23134..27515 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931961.0530155-UTR-F-serratus_M_contig634:23078..231331622931961.0530155-UTR-F-serratus_M_contig634:23078..23133Fucus serratus maleUTRF-serratus_M_contig634 23079..23133 +
1690964077.5575976-UTR-F-serratus_M_contig634:23078..231331690964077.5575976-UTR-F-serratus_M_contig634:23078..23133Fucus serratus maleUTRF-serratus_M_contig634 23079..23133 +
1622931961.1775498-UTR-F-serratus_M_contig634:27515..281291622931961.1775498-UTR-F-serratus_M_contig634:27515..28129Fucus serratus maleUTRF-serratus_M_contig634 27516..28129 +
1690964077.6339402-UTR-F-serratus_M_contig634:27515..281291690964077.6339402-UTR-F-serratus_M_contig634:27515..28129Fucus serratus maleUTRF-serratus_M_contig634 27516..28129 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931961.0704763-CDS-F-serratus_M_contig634:23133..235761622931961.0704763-CDS-F-serratus_M_contig634:23133..23576Fucus serratus maleCDSF-serratus_M_contig634 23134..23576 +
1690964077.571877-CDS-F-serratus_M_contig634:23133..235761690964077.571877-CDS-F-serratus_M_contig634:23133..23576Fucus serratus maleCDSF-serratus_M_contig634 23134..23576 +
1622931961.0881534-CDS-F-serratus_M_contig634:24985..250741622931961.0881534-CDS-F-serratus_M_contig634:24985..25074Fucus serratus maleCDSF-serratus_M_contig634 24986..25074 +
1690964077.582218-CDS-F-serratus_M_contig634:24985..250741690964077.582218-CDS-F-serratus_M_contig634:24985..25074Fucus serratus maleCDSF-serratus_M_contig634 24986..25074 +
1622931961.108804-CDS-F-serratus_M_contig634:25892..260441622931961.108804-CDS-F-serratus_M_contig634:25892..26044Fucus serratus maleCDSF-serratus_M_contig634 25893..26044 +
1690964077.597946-CDS-F-serratus_M_contig634:25892..260441690964077.597946-CDS-F-serratus_M_contig634:25892..26044Fucus serratus maleCDSF-serratus_M_contig634 25893..26044 +
1622931961.125377-CDS-F-serratus_M_contig634:26206..263901622931961.125377-CDS-F-serratus_M_contig634:26206..26390Fucus serratus maleCDSF-serratus_M_contig634 26207..26390 +
1690964077.607319-CDS-F-serratus_M_contig634:26206..263901690964077.607319-CDS-F-serratus_M_contig634:26206..26390Fucus serratus maleCDSF-serratus_M_contig634 26207..26390 +
1622931961.1447878-CDS-F-serratus_M_contig634:26554..268441622931961.1447878-CDS-F-serratus_M_contig634:26554..26844Fucus serratus maleCDSF-serratus_M_contig634 26555..26844 +
1690964077.6169882-CDS-F-serratus_M_contig634:26554..268441690964077.6169882-CDS-F-serratus_M_contig634:26554..26844Fucus serratus maleCDSF-serratus_M_contig634 26555..26844 +
1622931961.1572998-CDS-F-serratus_M_contig634:27275..275151622931961.1572998-CDS-F-serratus_M_contig634:27275..27515Fucus serratus maleCDSF-serratus_M_contig634 27276..27515 +
1690964077.6255527-CDS-F-serratus_M_contig634:27275..275151690964077.6255527-CDS-F-serratus_M_contig634:27275..27515Fucus serratus maleCDSF-serratus_M_contig634 27276..27515 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig634.17232.1

>prot_F-serratus_M_contig634.17232.1 ID=prot_F-serratus_M_contig634.17232.1|Name=mRNA_F-serratus_M_contig634.17232.1|organism=Fucus serratus male|type=polypeptide|length=466bp
MAVACFRISLIASIFIFLAEYVKTSSTDSILVIPTTSQVANTNETSVTLS
RNGRTQHCMTGSLTAAAATAGGAAARRTFRTPNKHSGWLCGCFHGGSGRP
GLRALSFLPPAVAPQRATGAAVLTRPLSVETKRLGSTPQLIIERDKCRPA
VRSPPLRLSLSKPSSSKFTGRKTGGSTARPTAGASGSGGETLEMGCGGVD
GGMTSTLTWMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTK
GRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLRQRST
PAAPGGREPAQPDLVPPQPRVSLKWPNDVLLDGDKVAGVLIEAELPFLLV
GIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLC
SWASGEDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVD
PDTGREELLTTEYLL*
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mRNA from alignment at F-serratus_M_contig634:23079..28129+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig634.17232.1 ID=mRNA_F-serratus_M_contig634.17232.1|Name=mRNA_F-serratus_M_contig634.17232.1|organism=Fucus serratus male|type=mRNA|length=5051bp|location=Sequence derived from alignment at F-serratus_M_contig634:23079..28129+ (Fucus serratus male)
CCGTCTCACCGTGCCCTCTTTTGACGCGATCAACTCACCCACTGCCCCCG
GGTGAATGGCTGTGGCCTGTTTTCGCATCTCTCTGATCGCGTCTATTTTC
ATCTTCCTTGCCGAGTACGTGAAGACCTCTTCCACGGATTCTATTCTCGT
CATCCCGACAACCTCCCAAGTTGCCAATACGAACGAGACGAGCGTGACCC
TTTCCAGGAACGGAAGGACGCAGCATTGTATGACCGGCTCGCTCACCGCA
GCAGCCGCAACAGCAGGTGGAGCAGCAGCGAGAAGGACGTTTCGAACACC
GAATAAGCATTCCGGGTGGCTGTGCGGTTGCTTCCACGGAGGTAGCGGGA
GACCTGGCCTCCGCGCTTTGTCGTTCCTTCCTCCTGCTGTCGCCCCTCAG
CGTGCAACGGGCGCTGCGGTTTTGACACGACCTTTGTCGGTGGAGACTAA
GCGTCTGGGCTCCACGCCGCAGCTGATCATTGAACGAGACAAGTGTAGGT
GGGCGAGCCGAGTGTTTCTAGTTCCCAAAAATTGTCGAATATCATTCGAC
CGTTTCTACTTGACCATCCATACATACATACTTGCCAACGGAAAATATAT
ATCCGTGCCTGTTCCGGTCTAAGATCCGAGACCCTCCTCTCTACAGCACA
TGCCTTCTGCACCAAACTTGGTGTACAAGTACCCACATGGTGTCTATAGC
CTCAGATACTTTCAACATGCCCACTTCATACCAATAGCGAGAGAGGCGCA
CATTAGTTGGTACATGGTGATAACTTGAAAGGCAGTACTCGTTACTGGAA
CTACCTTGAGGACTACTGGTCCTGTGCCGCGGACTCTTGGCAATGAACGC
GATCGGTACGCAAATGCATGACCCAATAAACTCGTGACTGACCCGATGGC
GTATTGGCGGTATAAATAAATGGACGCCGCCGCGGAAAATGGGAGGAATC
CCTTGAGTAAGCACCAGATTCAGCCTTGGTGTGGAGAATGAGCAGACTTA
CGGGGGACGAGACGGCCGGACCCGTCTCGCGAGACCATATTCCCAGGCGC
GAACGGGGACAGGGAAATATTCATTTTCCCTGTTTAGCTCACCACGAGCA
GGATTGGCAACCGACCATACAAGGTTGATGCCCAATCTGCTGAACATGGT
GACCGCACTTAAACACTGACAGACTTGTAGGCTGTCCCCGAAGTACTTCC
CACTGTCACGAGATTGCTTGGTACGCAACGAGGGTATTTATAGTTGTTTG
TAGTCTGTAGACCGGAATAGCCTTGCGGAACAGTCACCTGACAACAATGT
GGTAGATGCATCAAAAACTGTAGGTACAGATTCGGAGGCATAGATCGAGC
GCCTCGTCCATTTATGTTTCTTCTTCGTGTGTCTCTTTTTCTTTAAATTA
ATTTCCAAAAGTCTCTTCCCTCGCACCTCGAGAAAGTGATGTACCTTACC
ATACGAATAGTCAGATGCGACGATTGCCATGGGCTCTACTGTATGGTCTA
CAGTTGGAGGGACGGCTTGATCAATTTGGACTTGGTACTTGCAACGCTAC
CCCTTCCAGTCAAGAAGGGTTGATTGATTGATTGATCACTTTTTTTCTCT
ATGTCGGCGGAAATATTAAGCTTAGCGGCGTCTGCGGATTTGGGCTTCAG
AGGTCTCTGGCAGTGTATACTGTTCTATAATACCGGTTATGTTAATGTGT
ACTTTGGAGAACTCTTAACAGGGGGAGGGGGGGGAGGGGGGTCGGACCCC
GAGGGGGAGTATAGTCCCAGTAAGACGTCTACGCGATCACGTTCACAGCT
CCACCGCTCGGTAGTCTTGACCTAAAACAGCAGCACGCTACCAGGTATCG
GGTACGACAAAATTTGTCCCGTCATCCCGGTGCTGTTTCCCTTCCCGCTG
TCTGCAGGCCCGCGGTACGATCGCCCCCCCTGCGCCTGTCCCTCTCCAAG
CCCTCCAGCTCCAAGTTTACCGGTCGCAAAACGGGCGGAAGCACAGGTAA
CAACGAGGCTATTTCGCCACAAGCTGGTCTTTTAGCAGGGTACGAGTTAA
AGTCATACCTGGTACGTCGATTAAACTCCAAACTATAATAAAATATCACC
GCAAATACGGTACTTTTGTCACTTTTCAATCGAGTACGAGTACGGTTAGC
GTGATGAATAACATAACCATGCACTACCATTCGTGCGGAATTTTTCTCTC
CGAGTCTCAAGCGGGATGATTTCTGTACCCCAATAAAAATTGCAATTTGT
TGCGGAAAGCGCGAGAACGGGAGTAAGCTACGCTCAACGAGTGGTTGATG
GAGGTGTCAAGAGCGCTAAACATGCATCGGGACATAAAATCGTACCGGTA
GGCGGGAACCCGGGAGGGATAGTTATTAATAGTGGAATCTTAGTGACCAC
AGATTGGGATAGGCGACGTTACAGTAGTAGAGGTGAGATTTGAAACTTGG
CACGTTGATATGAGACCGTCGCCCTCCAAAAATAATGCATTATGTACAGG
GAGTGCAAAATAAGAGCAAAAAAGTGTTTAATCGCATGTCCTTGAACTTC
ATCAGCCGGTCAGAGGTGTAGAGCTGTGTAGAGCTAGAGCGGCCCTTTTA
TTTCGACCGTAATCTCTACCTAAAAACTAGACTCCTCCGTAGCCCCGCTG
GGCCTGGAAGTTTTGCTTGTCCATGTCCGGAACCTGGAGCACCAGAGGCA
AAACAATGCTGTGGTGAGCGAGTTGCAAGCACCTGCGACCTATATGCCCG
ACCCCCGGCCTTGCCCGCCTGTTGACGGCAAACCTTCGTTCAATGATGTG
CCTCTGCGTTACAGCTCGGCCAACCGCGGGCGCTAGTGGTTCGGGGGGAG
AGACGTTAGAGATGGGTTGTGGCGGCGTCGACGGGGGCATGACGTCAACC
CTTACTTGGATGGAGTCGGTCAATTCCACCATGGACGAGGCCAAGACTCT
CGTCGTCAAGCAGCAGGTGATGCAAGCGATGCAAGATGAAACGCCTCTTA
ATAGACGGAGCGATGGATTGGTCCGGTGGTCGTGCAACGGCGAGCTGAAA
CCACTCCCTAGTGTTAGCAAAGGTGAATAAAGTTTGACGGTTACAATTTT
TTGTGCCTCTTCGCGCATTGCTTGTCAGGGCAGCGGCGCGAACGGTGTGT
TCGGCGTGGCGGCTCGGGAGCAGCTTAAAGGGAGAGGGACCAAGGGCCGC
GCCTGGGTGGGCTTGCCAGGGAACGTTTTCCTCACGGTCGCCATCCCGCT
TGAGCGGGTGCCCGTGCCGCTAAGCCTGATCCCCCTCCGAGTGGGAACGT
TGATTGCTCCAGGTGAAAAACGAGGAATCTATTTTCACCCCGTGGAACCA
TGACGGATAATCTAATCGCGATGGCACCCTCTGCATATCACTTTACAAAA
TGCCAGAACTAACCCCTCTACACCCAATTTATCGCTTATCGACTCGAGCG
GTGTCCCTGTCACCGCTGCCTGGCAGAAATACAGCGCACGCTGCGACAAC
GGTCAACCCCGGCGGCTCCTGGAGGAAGGGAGCCGGCGCAGCCAGATTTA
GTTCCTCCACAGCCCCGGGTTTCGCTCAAGTGGCCAAACGACGTGTTGTT
GGATGGGGACAAGGTGGCCGGGGTCCTCATAGAGGCGGAGCTTCCCTTCT
TGCTCGTCGGAATCGGAGTCAACGTGAGAAACAAGCCGGATGTGCACCAG
CAGGGACCGGATCGAGGCCGTCCGGCAGCGTGCCTGGCGGAGTACGGGGG
AGACAGCACAGATCAGGTATTTCCTTTCCGTGAGTAGATCGAATTTTTTT
AAAGCACAAGAGAGCAGACAGAATACACGGCACTATACACTATACAGCTA
TGATAGCTCCTGTGGGGGGGAGAGAAAAAGCAAGAAAATAGCGGTTGCGG
ATGACGAACTGGGGTAAGTTTTTCACTGGGTGCTCCCACATTCCCTCCCA
AAATCCCCCAAGGGAAATAATTTGTCGCGTACCCCAAAGGACGCCACAGC
GGTAACGCAAAATCCATGCAGGCAATGGAGAAGACGTAGCGGTTGTTGTC
TTGACACGTGGTGGGTGACTGCGCTGCATTCGTACAAAAACTTGCAAAGG
TACTTGTATTTCCATCTTTGGAAGCGAAATCATTCTTTAACGCCACACCT
TGGCCCCGCATCTCCTCCGTCGACGATTCTGACCGTGGTGATCCAAGGCT
GTCCGGGCTCTATCCGCGACGCTCACGGATAAGCTTTGCTCGTGGGCTTC
TGGTGAGGATTCCGCGGAGTTAGCGCTGGCGGAATGGTCGCGCTGGGTCG
ATTGGACACTCCCGCTCCAAATTAGGGACGAAGGAAGGGTGGTGAGACCC
GTTGGGGTTGCCCCAGATGGATGCTTACGCGTGGTGGACCCTGACACGGG
AAGAGAGGAACTCCTGACAACAGAGTATCTTTTGTGACAAATTTTCTCCC
TTGTAAGGTCAAGTAAAAAGTTCCGTAGACTTTTTTGTCGCATTTCAGCA
GTAAAATTGTGGGAAAATGCACCTGTGTACCCAAAGCGCGTGCGTCGCTG
TTGGTTTTCGGTAAGCCGGAGAAGAGATGAGCCCCGTGTGTTGATTTCGT
AAGGGGAGCGGATTGGCAGAAGATTGGTCGATTTTAACTGAAAGCACGTT
CAGCCGCTGTGGGCGTCAGTGGAAGTGCGGAGGATGTCGCCAGGGTGCGC
GCCCCATGGCGCCGTGCTGGTTCTTGAGCAACGTGCGGTGTAAAATCTAC
TATAGTAGTGTAAAAGCATTTTACCTTGAAGGGACCGCCGTAAAACTGTG
GTCGTAAGGTAGCACTATCCGCACGCACCACTCGGCAGCACCGACCTCCG
TCACGGGAAAGGGAAAACAGAGACTAGTCAGATTACTGTATGTATTATGA
TACCTTACCCACGACGACAAGAGTACGCAGAGTTGGTCGATTCGAATTCG
ATTTAGTATTTAAGGGTAGTACACATTTAAGTATTTTTTGTTTTTTTAAA
AATCAAACGACCTCCTTAAATAGCCATCTGAGGAACTACTGTACTTCCGC
G
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Coding sequence (CDS) from alignment at F-serratus_M_contig634:23079..28129+

>mRNA_F-serratus_M_contig634.17232.1 ID=mRNA_F-serratus_M_contig634.17232.1|Name=mRNA_F-serratus_M_contig634.17232.1|organism=Fucus serratus male|type=CDS|length=2796bp|location=Sequence derived from alignment at F-serratus_M_contig634:23079..28129+ (Fucus serratus male)
ATGGCTGTGGCCTGTTTTCGCATCTCTCTGATCGCGTCTATTTTCATCTT
CCTTGCCGAGTACGTGAAGACCTCTTCCACGGATTCTATTCTCGTCATCC
CGACAACCTCCCAAGTTGCCAATACGAACGAGACGAGCGTGACCCTTTCC
AGGAACGGAAGGACGCAGCATTGTATGACCGGCTCGCTCACCGCAGCAGC
CGCAACAGCAGGTGGAGCAGCAGCGAGAAGGACGTTTCGAACACCGAATA
AGCATTCCGGGTGGCTGTGCGGTTGCTTCCACGGAGGTAGCGGGAGACCT
GGCCTCCGCGCTTTGTCGTTCCTTCCTCCTGCTGTCGCCCCTCAGCGTGC
AACGGGCGCTGCGGTTTTGACACGACCTTTGTCGGTGGAGACTAAGCGTC
TGGGCTCCACGCCGCAGCTGATCATTGAACGAGACAAGTGTAGATGGCTG
TGGCCTGTTTTCGCATCTCTCTGATCGCGTCTATTTTCATCTTCCTTGCC
GAGTACGTGAAGACCTCTTCCACGGATTCTATTCTCGTCATCCCGACAAC
CTCCCAAGTTGCCAATACGAACGAGACGAGCGTGACCCTTTCCAGGAACG
GAAGGACGCAGCATTGTATGACCGGCTCGCTCACCGCAGCAGCCGCAACA
GCAGGTGGAGCAGCAGCGAGAAGGACGTTTCGAACACCGAATAAGCATTC
CGGGTGGCTGTGCGGTTGCTTCCACGGAGGTAGCGGGAGACCTGGCCTCC
GCGCTTTGTCGTTCCTTCCTCCTGCTGTCGCCCCTCAGCGTGCAACGGGC
GCTGCGGTTTTGACACGACCTTTGTCGGTGGAGACTAAGCGTCTGGGCTC
CACGCCGCAGCTGATCATTGAACGAGACAAGTGTAGGCCCGCGGTACGAT
CGCCCCCCCTGCGCCTGTCCCTCTCCAAGCCCTCCAGCTCCAAGTTTACC
GGTCGCAAAACGGGCGGAAGCACAGGCCCGCGGTACGATCGCCCCCCCTG
CGCCTGTCCCTCTCCAAGCCCTCCAGCTCCAAGTTTACCGGTCGCAAAAC
GGGCGGAAGCACAGCTCGGCCAACCGCGGGCGCTAGTGGTTCGGGGGGAG
AGACGTTAGAGATGGGTTGTGGCGGCGTCGACGGGGGCATGACGTCAACC
CTTACTTGGATGGAGTCGGTCAATTCCACCATGGACGAGGCCAAGACTCT
CGTCGTCAAGCAGCAGCTCGGCCAACCGCGGGCGCTAGTGGTTCGGGGGG
AGAGACGTTAGAGATGGGTTGTGGCGGCGTCGACGGGGGCATGACGTCAA
CCCTTACTTGGATGGAGTCGGTCAATTCCACCATGGACGAGGCCAAGACT
CTCGTCGTCAAGCAGCAGGGCAGCGGCGCGAACGGTGTGTTCGGCGTGGC
GGCTCGGGAGCAGCTTAAAGGGAGAGGGACCAAGGGCCGCGCCTGGGTGG
GCTTGCCAGGGAACGTTTTCCTCACGGTCGCCATCCCGCTTGAGCGGGTG
CCCGTGCCGCTAAGCCTGATCCCCCTCCGAGTGGGAACGTTGATTGCTCC
AGGGCAGCGGCGCGAACGGTGTGTTCGGCGTGGCGGCTCGGGAGCAGCTT
AAAGGGAGAGGGACCAAGGGCCGCGCCTGGGTGGGCTTGCCAGGGAACGT
TTTCCTCACGGTCGCCATCCCGCTTGAGCGGGTGCCCGTGCCGCTAAGCC
TGATCCCCCTCCGAGTGGGAACGTTGATTGCTCCAGAAATACAGCGCACG
CTGCGACAACGGTCAACCCCGGCGGCTCCTGGAGGAAGGGAGCCGGCGCA
GCCAGATTTAGTTCCTCCACAGCCCCGGGTTTCGCTCAAGTGGCCAAACG
ACGTGTTGTTGGATGGGGACAAGGTGGCCGGGGTCCTCATAGAGGCGGAG
CTTCCCTTCTTGCTCGTCGGAATCGGAGTCAACGTGAGAAACAAGCCGGA
TGTGCACCAGCAGGGACCGGATCGAGGCCGTCCGGCAGCGTGCCTGGCGG
AGTACGGGGGAGACAGCACAGATCAGAAATACAGCGCACGCTGCGACAAC
GGTCAACCCCGGCGGCTCCTGGAGGAAGGGAGCCGGCGCAGCCAGATTTA
GTTCCTCCACAGCCCCGGGTTTCGCTCAAGTGGCCAAACGACGTGTTGTT
GGATGGGGACAAGGTGGCCGGGGTCCTCATAGAGGCGGAGCTTCCCTTCT
TGCTCGTCGGAATCGGAGTCAACGTGAGAAACAAGCCGGATGTGCACCAG
CAGGGACCGGATCGAGGCCGTCCGGCAGCGTGCCTGGCGGAGTACGGGGG
AGACAGCACAGATCAGGCTGTCCGGGCTCTATCCGCGACGCTCACGGATA
AGCTTTGCTCGTGGGCTTCTGGTGAGGATTCCGCGGAGTTAGCGCTGGCG
GAATGGTCGCGCTGGGTCGATTGGACACTCCCGCTCCAAATTAGGGACGA
AGGAAGGGTGGTGAGACCCGTTGGGGTTGCCCCAGATGGATGCTTACGCG
TGGTGGACCCTGACACGGGAAGAGAGGAACTCCTGACAACAGAGTATCTT
TTGTGAGCTGTCCGGGCTCTATCCGCGACGCTCACGGATAAGCTTTGCTC
GTGGGCTTCTGGTGAGGATTCCGCGGAGTTAGCGCTGGCGGAATGGTCGC
GCTGGGTCGATTGGACACTCCCGCTCCAAATTAGGGACGAAGGAAGGGTG
GTGAGACCCGTTGGGGTTGCCCCAGATGGATGCTTACGCGTGGTGGACCC
TGACACGGGAAGAGAGGAACTCCTGACAACAGAGTATCTTTTGTGA
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