mRNA_F-serratus_M_contig1223.1721.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 376 bits (965), Expect = 8.060e-109 Identity = 330/1077 (30.64%), Postives = 487/1077 (45.22%), Query Frame = 1
Query: 1 RLTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYFTPAGLN-IGIIRTDNSGEFKGA-FQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVA-------LLQGVTEGASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRP-PAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRP---RGTFRLRDLTTGAVIWRQAVTWHPAAGAGRGIPLAAATGGGDEGR*K------PFAAPRGL------RDSYGGAGCGTRVGEAGGVGGVTEYTGGFPPGAGTTGRATRASRAPGDASRF**AGDR------VGKTRG*GVGTGLAGRATGRTGCFK-----------------------------EAP*LIHGRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEGRRSTQRKNRTRHQDHF*TESRPGWPCRKNTSTASWP-RVSARSRGFITKRHRRR------------HLHSRA--------RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKND-AEIAEMHG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNVR 2970
+L G +AC CS ++ +R + T+ R+DK+ GRVF+DL G + S+ G + M+ DDF+R + F+ KSDA + R +A + + I+R+DN GEF G F S+ EL IK E TP Y+PQYNGVAER LGL+ + +A L V +++LWAEAM +AC N + +PYEMW+G P PA PF Y R ++P KL +G C +G + H + HR GT + T V+ Q P+ +P+ A GG++ P RG+ RD+ G RV E VG AG+ G + +P + S A + V G G G+ +G EAP R H + A R+ + R GR R + + G+ + L R D+ + +EL +DV V + AQ R A EG S + + R F ++ C N A W + A G I K R +L + + R+ +A+ + + E D+E AF+++++ E++++LP G +V L K++YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VDD+L TK + L S P K+LGE+ ++LGC RDR+A T+ Q+ Y ++V ERF + +TS IP P ND + E G +P+RE VG+LMW+AN TRPD++ +A+ P HWKA K L YL TA L + + D +VDAD AS + RRSVSG V++ + W S+ Q+ + +TSE+EY+A+ + V E F+ + F+ P I V EDNEGAI +AEN SS +++HIDV+HH +R+ + G++ V +V S E HAD+LTKA+ LFE H F L R
Sbjct: 212 KLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPA--RPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLQSQLPPLQPS------LPIEVAEEGGEDSDDNVETEVWPLVG-RGVAHTLLKRDAVP---SGARVEEVESVG------------AGSVGPSFSVPSSPAEPSSL--ANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPA-ARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQR-----AGDETELPKELV----------QDVESVPDSYQEAQ----RSKYAKIWEGAMSAEVEGLIR-AGTFTLAAKVPIGC--NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-----------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFALGSR 1226
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 358 bits (918), Expect = 1.220e-101 Identity = 321/1061 (30.25%), Postives = 475/1061 (44.77%), Query Frame = 1
Query: 4 LTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYFTPAGLN-IGIIRTDNSGEFKGA-FQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVA-------LLQGVTEGASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRP-PAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRP---RGTFRLRDLTTGAVIWRQAV-------------------------TWHPAAGAGRGIPLAAATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRVGEAGGVGGVTEYTGGFPPGAGTTGRATR----ASRAP------GDASRF**AGDRVGKTRG*GVGTGLAGRATGRTGCFKEAP*LIHGRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEGRRSTQRKNRTRHQDHF*TESRP--------GWPCR-KNTSTASWPRVSAR--SRGFITKRHRRRHLHSRA--------RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNVR 2970
L G+ + C CS A+ ++ + + T++R+DK+ GRVF+DL G V S+ G + M+ DDF+R + F+ KSDA R+ +A + + I+R+DN GEF G F S+ EL IK E TP Y+PQYNGVAER LGL+ + +A L V +++LWAEAM +AC N + K+PYEMW+G P PA PF Y R ++P+ KL +G C +G + H + HR GT + T V+ Q W P G G L K A P G T V E +S P G+ GD R + +P GR H + A R+ + R GR R + N V + T V ++ A D+ + +EL P E+ R W EG RS + + R P W + K T + AR ++GF K + +L + + R+ +A+ + + E D+E AF+++++ E+++++P G +V L K++YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VDD+L TK + L S P K+LGE+ ++LGC RDRKA T+ Q+ Y ++V ERF I +TS IP ASL+ +D + E G +P+RE VG+LMW+A+ TR D++ +A+ P HWKA K L YL TA L + + ++ D+ +VDAD AS RRSVSG V + + W SR Q+ + +TSE+EY+A+ + V E F+ + F+ P + I V EDNEGAI +AEN SS +++HIDV+HH +R+ + G++ V +V S+E HAD+LTKA+ LFE H F L R
Sbjct: 399 LVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPA--RPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLPSQLXXXXXXXXXXXXXXXXXXXXXXXXXEVW-PLVGRGVAHTLL-----------KREAVPPG-----------TEVVEVESXXXXXXXXXXXXXXXXXXXXXXXXXSVSSPVPEIDVNSGEIETGDPGGDDEXXXXXXXXXXXXXXXXXXRPVETEASPPT--GRRPRHVAELADFNTAARENDEVREGRTRAQTRAV---NQQSVPGLMATIGPISGTEVLYALLSEQRAG--DETELPKELVQDVESEPGSYEEAQRSKYAK------------IW--EGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQK-YGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIP-----ASLNN-----DDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDFALGSR 1400
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 350 bits (897), Expect = 4.170e-98 Identity = 327/1115 (29.33%), Postives = 491/1115 (44.04%), Query Frame = 1
Query: 4 LTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARY-FTPAGLNIGIIRTDNSGEF-KGAFQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVAL-LQGVT--EGASE--RLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRPRGTF---RLRDLTTGAVIWRQAVTWHPAAGAGRGIPLA----------------AATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRVGE-----------------------------------AGGVGGVTEYTGGFPPGAGTTGRATRASRAPG--------DASRF**AGDRVGKTRG*GVGTGLAGRATGRTG-------CFKEAP*LIH----GRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATG---VAWCCRCK---AKPNLTRVS*GGSRDRPASGIDDADWSRE-------------LPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEG---RRSTQRKNRTRHQDHF*TESRP---GWPCRKNTSTASW------------PRVSAR--SRGF-----ITKRHRRRHLHSRA--RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNV 2967
L G+ C CS A+ + +P T TRA K+ RVF+DL+G V+SL G + ++ DD++R+ V F+ KSDA +A A ++ ++R+DN GEF +G F + + IK E TP ++P+YNGVAER LGL++D +A +Q T GA LWAEA+A++CN N T S K+PYEMWHG PP PF +V++ HK + KC LG +N +R + R +TT W Q+V PAA P+A A+ GG +P D G GT + V T TG G G R +SR V G G C EA L T T+ + + R + L A +++ W A+ RV R+ + +A +R+ L + A A + L + + +R + P V R ++ R + H T + G P + ++ W AR +RGF + H S A ++ LAV + DV+ A+ A + EE++++LP G D +++ ++A+YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVDD+LV + +D + L FP K+LGE ++ GC I RD +A T+ Q Y ++ ERF ++ TS IP G A L GPK + E E P REA+G++MWV+ +RPD+++ +A+ P HW A+ K L YLK T LG+TY + + L+ +VDA +A D RRSVSG A +GG +S S+ Q I + +++E+EY+A E V E F+R V +F+ P ++I+V EDN+GAI + +N SS +T+HIDV++H +R G + V++V + E HAD+LTKA++ + H R L+N+
Sbjct: 536 LVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKR-THKSEPKAQKCFYLGPG----INTNRDCVRILNEKRRAITTRNFTW-QSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPV-------DGGPGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAELTSRRTRENPRRNPRYESPPSPTSAEALLASVASLPDSSTEEFTRWMLSAVLHVAEGLEARVV----RELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG-ADL----GPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1623
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.870e-97 Identity = 328/1119 (29.31%), Postives = 480/1119 (42.90%), Query Frame = 1
Query: 22 ACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYF---TPAGLNIGIIRTDNSGEFKGAFQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVALLQGVTE-----GASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPF--GTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRPRGTFRLRDLT-TGAVIWRQAVTWHPAAGAGRGIPLAAATGGGDEGR*KPFAAPRGLRD-SYGGAGCGTRVGEAGGVGG-----------VTEYTGGFPPGAGTTGRATRASRAPGDASRF**AGDRVGKTRG*GVGTGLAGRATGRTGCF-----------------------------------------------KEAP*LIHGRFTPHPTQ----PHKKGQARRQKCKCRWGRGRP-LLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDG-------RPDCAWCVEGRRST-----QRKNRTR-----HQDHF*TESRPGWP------------------------CRKNTSTASWPRVSARSRGFIT------------KRHRRRHLHSRA--------RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNV 2967
+C CS A+ AV + T+TRA K+ RVFIDL G S+ G + ++ D +R+ V F+ +KS+A L IA Y TP + ++R+DN EF+G F + GIK E+TPP+TP+YNGVAER LG++ D +A E LWAEA+A AC+ N T + DK+PYEM+HG+PP ++ PF V R E+ +H +G K LG A H PR R+ LT G V+ + TW R +P + P L D GG G G+ + G GG +TE G PG T A PG+ + GD +G G G G +++ G + P P +G+ K WG + L++ T S + + + +EL E + A+ RP C S Q+ N ++D ++ R W RK ST +G IT + H + + HS + ++A+A T+ R D++ A+ A + EELYV + DG +V +++A+YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + LR + P+KDLGE ++Y GC I RD + T T Q+ Y + +RFGI T+ P A L GPK D E P R+A+G LMW A TRPD+A + + + P WKA+++ L YL T LG+TY + + L +VDA +A RRSV+G AV +GG +S S+ QRI + +TSE+EY+A E V E F+R V +F+ P I+V EDN+GAI + +N FSS +++HIDV+ H +R+ G + VEY+ + E HAD+LTKA+ E H L+N+
Sbjct: 734 SCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPC--EVYVVRSDN--EFQGQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDAPTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGKPPPAGSVYPFLKPAVYKARRERKSHP---KGRKGWYLGPAHNH------PRDCVRM--LTEAGTVVTTRNFTW-------RHVPAVS-----------PVPPQLPLADIGEGGEGEGSEDTSSRGGGGEEDLASESDLDMTEIRG---PGRATLPARENAPAVPGNGIQ----GDEGSAPPSPHLGGGDFGGGDGIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDVDGEDSGGSDDGEYKYDPADTRYPPGTQGK------KLLWGASKEGPLRYGLQRGRTXXXXXXXXXXXXXXXXXXXXXXXXXLLSTVLEVEGGKELVAEYLQRSLVEERQMEEMALXXXXXXXXXXSDVPVERPFNIDCSNPELSIPSPIGQKPNDVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPN-ADL----GPKRDDEPGVDK--PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 348 bits (892), Expect = 3.340e-97 Identity = 326/1126 (28.95%), Postives = 493/1126 (43.78%), Query Frame = 1
Query: 4 LTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARY-FTPAGLNIGIIRTDNSGEF-KGAFQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVAL-LQGVT--EGASE--RLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRPRGTF---RLRDLTTGAVIWRQAVTWHPAAGAGRGIPLA----------------AATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRVGE-----------------------------------AGGVGGVTEYTGGFPPGAGTTGRATRASRAPG--------DASRF**AGDRVGKTRG*GVGTGLAGRATGRTG-------CFKEAP*LIH----GRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPN-------------LTRVS*GGS----RDRPASGIDDADWSRE-------------LPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEG---RRSTQRKNRTRHQDHF*TESRP---GWPCRKNTSTASW------------PRVSAR--SRGF-----ITKRHRRRHLHSRA--RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNV 2967
L G+ C CS A+ + +P T TRA K+ RVF+DL+G V+SL G + ++ DD++R+ V F+ KSDA +A A ++ ++R+DN GEF +G F + + IK E TP ++P+YNGVAER LGL++D +A +Q T GA LWAEA+A++CN N T S K+PYEMWHG PP PF +V++ HK + KC LG +N +R + R +TT W Q+V PAA P+A A+ GG +P D G GT + V T TG G G R +SR V G G C EA L T T+ + + R + P + + + A + P+ + V+ G R+ + +A +R+ L + A A + L + + +R + P V R ++ R + H T + G P + ++ W AR +RGF + H S A ++ LAV + DV+ A+ A + EE++++LP G D +++ ++A+YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVDD+LV + +D + L FP K+LGE ++ GC I RD +A T+ Q Y ++ ERF ++ TS IP G A L GPK + E E P REA+G++MWV+ +RPD+++ +A+ P HW A+ K L YLK T LG+TY + + L+ +VDA +A D RRSVSG A +GG +S S+ Q I + +++E+EY+A E V E F+R V +F+ P ++I+V EDN+GAI + +N SS +T+HIDV++H +R G + V++V + E HAD+LTKA++ + H R L+N+
Sbjct: 692 LVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKR-THKSEPKAQKCFYLGPG----INTNRDCVRILNDKRRAITTRNFTW-QSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPV-------DGGPGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAELTSRRTRENPRRNPRYE--------SPPSPPTSAPSPTSAEALLASVASLPDSSTEEFTRWMLSAVLHVAEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG-ADL----GPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1786
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 340 bits (873), Expect = 3.300e-96 Identity = 313/1063 (29.44%), Postives = 461/1063 (43.37%), Query Frame = 1
Query: 22 ACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYF---TPAGLNIGIIRTDNSGEFKGAFQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVALLQGVTE-----GASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPFGTVGYRRVEKPA-HKLASRGAKCILLGTAGPHDVNDHRPRGTFRLRDLTTGAVIWRQAVTWHPAAGAGRGIPLAAATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRV-------------------------------------------------GEAGGVGGVTEYTGG-----FPPGAGTTGRATRASRAPGDASRF**AGDRVGKTRG*GVGTGLAGRATGRTGCFKEAP*LIHGRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCR-----CKAKPNLTRVS*GGSRDRPASGI----DDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEGRRSTQRKNRTRHQDHF*TESRPGWPCRKNTSTASWPRVSARSRGFITKRHRRRHLHSRA-------RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPV-PTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNV 2967
+C CS A+ AV + T+TRA K+ RVFIDL G S+ G + ++ D +R+ V F+ +KS+A L IA Y TP + ++R+DN EF+G F + GIK E+TPP+TP+YNGVAER LG++ D +A E LWAEA+A AC+ N T + DK+PYEM+HG+PP ++ PF KPA +SRG G D+ +R + R+ P G GI GDEG P + G D GG G T GE G EY +PPG T G+ + R+ G + G+T L+ + +R + R L R C + P L+ S G + + +D WS+ + + ++ + +GR + T+ + T+ K T R+ AR GF + H S A ++A+A T+ R D++ A+ A + EELYV + DG +V +++A+YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + LR + P+KDLGE ++Y GC I RD + T T Q+ Y + +RFGI T+ P P + R D P D P R+A+G LMW A TRPD+A + + + P WKA+++ L YL T LG+TY + + L +VDA +A RRSV+G AV +GG +S S+ QRI + +TSE+EY+A E V E F+R V +F+ P I+V EDN+GAI + +N FSS +++HIDV+ H +R+ G + VEY+ + E HAD+LTKA+ E H L+N+
Sbjct: 252 SCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPC--EVYVVRSDN--EFQGQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDAPTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGKPPPAGSVYPF--------LKPAVEDTSSRGG-------GGEEDLASESDLDMTEIRGPGRATLPARENAPAVP----GNGIQ-------GDEGS-APPSPHLGGGDFGGGDGIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDVDGEDSGGSDDGEYKYDPADTRYPPG--TQGKKLLWGASKEGPLRY---GLQRGRTXXXXXXXXXXXXXXXXXXXXXXXXXLLSTVLEVEGGKELVAEYLQRSLVEERQMEEMALXXXXXXXXXXSDVPVERPFNIDC-SNPELSIPSPIGQKPNDVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVS--------------TKWVFDYKTDE-------KGLITDFKARLVAR--GFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 341 bits (875), Expect = 4.440e-95 Identity = 322/1112 (28.96%), Postives = 486/1112 (43.71%), Query Frame = 1
Query: 4 LTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARY-FTPAGLNIGIIRTDNSGEF-KGAFQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVAL-LQGVT--EGASE--RLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRPRGTF---RLRDLTTGAVIWRQAVTWHPAAGAGRGIPLA----------------AATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRVGE-----------------------------------AGGVGGVTEYTGGFPPGAGTTGRATRASRAPG--------DASRF**AGDRVGKTRG*GVGTGLAGRATGRTG-------CFKEAP*LIH----GRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPN-------------LTRVS*GGS----RDRPASGIDDADWSRE-------------LPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEG---RRSTQRKNRTRHQDHF*TESRP---GWPCRKNTSTASW------------PRVSAR--SRGF-----ITKRHRRRHLHSRA--RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAIN 2925
L G+ C CS A+ + +P T TRA K+ RVF+DL+G V+SL G + ++ DD++R+ V F+ KSDA +A A ++ ++R+DN GEF +G F + + IK E TP ++P+YNGVAER LGL++D +A +Q T GA LWAEA+A++CN N T S K+PYEMWHG PP PF +V++ HK + KC LG +N +R + R +TT W Q+V PAA P+A A+ GG +P D G GT + V T TG G G R +SR V G G C EA L T T+ + + R + P + + + A + P+ + V+ G R+ + +A +R+ L + A A + L + + +R + P V R ++ R + H T + G P + ++ W AR +RGF + H S A ++ LAV + DV+ A+ A + EE++++LP G D +++ ++A+YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVDD+LV + +D + L FP K+LGE ++ GC I RD +A T+ Q Y ++ ERF ++ TS IP G A L GPK + E E P REA+G++MWV+ +RPD+++ +A+ P HW A+ K L YLK T LG+TY + + L+ +VDA +A D RRSVSG A +GG +S S+ Q I + +++E+EY+A E V E F+R V +F+ P ++I+V EDN+GAI + +N SS +T+HIDV++H +R G + V++V + E HAD+LTKA++
Sbjct: 549 LVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKR-THKSEPKAQKCFYLGPG----INTNRDCVRILNEKRRAITTRNFTW-QSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPV-------DGGPGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAELTSRRTRENPRRNPRYE--------SPPSPPTSAPSPTSAEALLASVASLPDSSTEEFTRWMLSAVLHVAEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG-ADL----GPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALS 1629
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 331 bits (848), Expect = 1.350e-94 Identity = 310/1021 (30.36%), Postives = 454/1021 (44.47%), Query Frame = 1
Query: 169 MLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYFTPAGLN-IGIIRTDNSGEFKGA-FQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVA-------LLQGVTEGASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRP-PAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRP---RGTFRLRDLTTGAVIWRQAVTWHPAAGAGRGIPLAAATGGGDEGR*K------PFAAPRGL------RDSYGGAGCGTRVGEAGGVGGVTEYTGGFPPGAGTTGRATRASRAPGDASRF**AGDR------VGKTRG*GVGTGLAGRATGRTGCFK-----------------------------EAP*LIHGRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEGRRSTQRKNRTRHQDHF*TESRPGWPCRKNTSTASWP-RVSARSRGFITKRHRRR------------HLHSRA--------RMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKND-AEIAEMHG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNVR 2970
M+ DDF+R + F+ KSDA + R +A + + I+R+DN GEF G F S+ EL IK E TP Y+PQYNGVAER LGL+ + +A L V +++LWAEAM +AC N + +PYEMW+G P PA PF Y R ++P KL +G C +G + H + HR GT + T V+ Q P+ +P+ A GG++ P RG+ RD+ G RV E VG AG+ G + +P + S A + V G G G+ +G EAP R H + A R+ + R GR R + + G+ + L R D+ + +EL +DV V + AQ R A EG S + + R F ++ C N A W + A G I K R +L + + R+ +A+ + + E D+E AF+++++ E++++LP G +V L K++YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VDD+L TK + L S P K+LGE+ ++LGC RDR+A T+ Q+ Y ++V ERF + +TS IP P ND + E G +P+RE VG+LMW+AN TRPD++ +A+ P HWKA K L YL TA L + + D +VDAD AS + RRSVSG V++ + W S+ Q+ + +TSE+EY+A+ + V E F+ + F+ P I V EDNEGAI +AEN SS +++HIDV+HH +R+ + G++ V +V S E HAD+LTKA+ LFE H F L R
Sbjct: 1 MIVKDDFTRRIWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPA--RPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLQSQLPPLQPS------LPIEVAEEGGEDSDDNVETEVWPLVG-RGVAHTLLKRDAVP---SGARVEEVESVG------------AGSVGPSFSVPSSPAEPSSL--ANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPA-ARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQR-----AGDETELPKELV----------QDVESVPDSYQEAQ----RSKYAKIWEGAMSAEVEGLIR-AGTFTLAAKVPISC--NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-----------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFGLGSR 959
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 335 bits (859), Expect = 6.840e-93 Identity = 299/1043 (28.67%), Postives = 455/1043 (43.62%), Query Frame = 1
Query: 4 LTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYFTPAGLNIGIIRTDNSGEF-KGAFQSLLAELGIKHERTPPYTPQYNGVAE--------------RTLGLLRDKTVALLQGVTEGASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRPPAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRPRGTFRLRDLTTGAVIWRQAVTWHPAAGAGRGIPL---AAATGGGDEGR*KPFAAPRGLRDSYGGAGCGTRVGEAGGVGGVTEYTGGFPPGAGTTGRATRASRAPGDASRF**AGDRVGKTRG*GVGTGLAGRATGRTGCFKEAP*LI--------HGRFTPHPTQPHKKGQARRQ-----KCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRE---------------------LPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEGRRSTQRKNRTRHQDHF*TESRPGWPCRKNTSTASWPRVSARSRGFITKRHRRRHLHSRARMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQ-DEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAINAKLFEKHARFLLNV 2967
LTGK C C +A+ R +VP+ RA K GRV +DL GP V SL G+ + + VD SR+ V + +KSDA A + ++A I R DN E+ +G F+ + GI E TPP PQYNGV E R+ G + A + G+ E +RLW E+ +A + N+ T + ++P+EM+ G F +LPF G+ R ++ KL + C L D+ P GT ++ +TG V++ V+W +A AG G AA T PF P + ++G A AS P T + A P A RQ K + P + ++TG+ ++ ++R G +A P A A ED+ A R + + RPD C +++ + +++ +E R W + + G T A+M A+ +L+ + DVE AF+ +++ E++Y+ LP G + L K++YGL A W L+A GFE+ AD CVFR G VV+I+VV+VDD+ + E ++ D+ A DL S P+K+LGE+ +Y GC R+++ +T QQ + + +G+ +P+ +G LS D + E P+RE VG+LMW+A TRPD+A +A++ +P HW A M L Y +RT+ G+++ G E L + DAD AS RRSVSGG V GGGA+SWFSR Q+ +T+E+EYVAL ++V E+ FLRQ+ FM+P + I V EDN+GAI++A+N S+ ++HIDV+HH +R+ V+ + V +V S AD LTK++ FE H F++N+
Sbjct: 816 LTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPL-VPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHVDFASIPGLDE-RGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPF-RVLPFFQPGFMREDRRT-KLDDQATLCYYLNGG------DNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTP-------PPFTPPV-VSINFGPAXXXXXXXXXXXXXXXXXXX------------XXSASSTPAXXXXXXXXXXXXXXXXQXXSATSPSPSAXXXXXXXXXXXXXXXXXXXXXDQXXXXXXXAMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDI---DATLRDQRPPEQRPDLPHC----QASDLRVPKSYKEAMASEHRHLW-----SDSMQREFYGLLEAGTFTP----------AKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA--DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSG-VKLSDFDADEVATEF------PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 332 bits (851), Expect = 4.790e-92 Identity = 303/1001 (30.27%), Postives = 457/1001 (45.65%), Query Frame = 1
Query: 97 RAGRVFIDLAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDATAVLRAIIARYFTPAGLN-IGIIRTDNSGEFKGA-FQSLLAELGIKHERTPPYTPQYNGVAERTLGLLRDKTVA-------LLQGVTEGASERLWAEAMAYACNMSNKCVTGSLDHDKTPYEMWHGRP-PAFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVNDHRP---RGTFR-LRDLTTGAVIWRQAVTWHPAAGAGRGIPLAAATGGGDE-------------GR*KPFAAPRGLRDSYGGAGCGTRVG-----EAGGVGGVTEYTGGFPPGAGTTGRATRASRAPGDASRF**AGDRVGKTRG*GVGTGLAGRATGRTGCFKEAP*LIHGRFTPHPTQPHKKGQARRQKCKCRWGRGRPLLQHAE*TNATGVAWCCRCKAKPNLTRVS*GGSRDRPASGIDDADWSRELPTG*AHHPARSEDVLRVAAMARRAQARDGRPDCAWCVEG--RRSTQRKNRTRHQDHF*TESRPGWPCRKNTSTASW----------PRVSARSRGFITKRHRRRH------------LHSRARMALAVMTQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVG*LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTMTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY--GGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREHHADVLTKAI 2922
R GRVF+DL G V S+ G + M+ DDF+R + F+ KSDA + R+ +A + + +R+DN GEF G F S+ EL IK E TP ++PQYNGVAER LGL+ + +A L V +++LWAEAM +AC N + K+PYEMW+G PA PF Y + ++P+ KL +G C +G + H + HR GT + RD+T A+ + P +P+ A GG+E GR A LR++ G + +AG VG P + +S AP G VG+ G G + R H + R+ + R GR R + + G+ P +G D + +EL P ++ A ++ A DG VEG R T F + C N A W V A++R + K R+++ + R+ +A+ + D E D+E AF+++ + E++++LP G +V L K++YGL A + K+ +L GFE+S +DPCV R +V+ ++ ++VDD+L TK +E L S P K+LGE+ ++LGC RDR+A T+ Q+ Y ++V ERF I +TS IP S A+ ++ E E +P+RE VG LMWVAN TRPD++ +A+ P WKA K L YL TA L + Y +D+ +VDAD AS RRSVSG V++ ++W S Q+ + +TSE+EY+A+ + V E F+ + F+ P ++ I V EDNEGAI +AEN SS +++HIDV+HH +R+ + G++ + +V S + HAD+LTKA+
Sbjct: 327 RIGRVFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPA--RPYPFLKPAYCKWQRPS-KLFPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEALPSQLPPPQPP-------LPIEIAEEGGEESDNDVETEVWPLVGR---GVAHTLLRNNAAVVPSGEAIDVVESVDAGSVGRSPS-----PXXXXXXXVPSVSSPAPEFTDGDGQGGQDVGEIESMGPGDQETDPVXXXXXEVEAEASPPVARRPRHVAELADFNNPARENDEVREGRTRAQTRAVNQQSVPGLV----ATLGPVFATEIINSLLAEQRAG-DAVELPKELVQDVESEPGSYQE----ARQSKHAAIWDGAMSAE--VEGLIRAGT-----------FTLAVKIPIGC--NVIDARWVFKWKADETGKIVKAKAR-LVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDILYAG-TKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPA-------SPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKAL 1276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1223.1721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1223.1721.1 >prot_F-serratus_M_contig1223.1721.1 ID=prot_F-serratus_M_contig1223.1721.1|Name=mRNA_F-serratus_M_contig1223.1721.1|organism=Fucus serratus male|type=polypeptide|length=371bp MYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVback to top mRNA from alignment at F-serratus_M_contig1223:6112..9084- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1223.1721.1 ID=mRNA_F-serratus_M_contig1223.1721.1|Name=mRNA_F-serratus_M_contig1223.1721.1|organism=Fucus serratus male|type=mRNA|length=2973bp|location=Sequence derived from alignment at F-serratus_M_contig1223:6112..9084- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1223:6112..9084- >mRNA_F-serratus_M_contig1223.1721.1 ID=mRNA_F-serratus_M_contig1223.1721.1|Name=mRNA_F-serratus_M_contig1223.1721.1|organism=Fucus serratus male|type=CDS|length=2226bp|location=Sequence derived from alignment at F-serratus_M_contig1223:6112..9084- (Fucus serratus male)back to top |