mRNA_F-serratus_M_contig6325.17211.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6325.17211.1
Unique NamemRNA_F-serratus_M_contig6325.17211.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.630e-24
Identity = 65/193 (33.68%), Postives = 97/193 (50.26%), Query Frame = 1
Query:   97 RQKFVQSLQRKVNVAIIDNS-----RFPFTNFMVYPPAPAFG---GVLARDHYYRRPCFVWVVELACKRYFPGHP--PCPVCKSSRGVKRKEWCSRRAILRDGSCDLTF-FVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            +++F + ++ K++ +I         RFPF N +V P    F     +   D +Y++   VW+ E      FP     PCP C              R +  D        F Y+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH KGF A A+ +RQ+H
Sbjct:   45 QERFFEEVKDKIDQSITHEGGGVKGRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFL----FPELQAVPCPGCGGKGAPDGWNPQGPRRVFMDHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAH 233          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5JXN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.630e-22
Identity = 66/200 (33.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query:   82 SLDHVRQKFVQSLQRKVNVAIIDNS-----RFPFTNFMVYPPAPAFG---GVLARDHYYRRPCFVWVVELACKRYFPGHP--PCPVCKSSRGVKRKEWCS---RRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            S    +++F + ++ K++ +I         RFPF N +V P    F     +   D +Y++   VW+ E      FP     PCP C   +G     W     RR  +      +  F Y+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++  V  + D LVH KGF   A+ +RQ+H
Sbjct:  104 STSSAQERFFEEVKDKIDRSITHEGGGVKGRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFL----FPELQAVPCPGC-GGKGAP-DGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICKVDRLTDHLVHGKGFSGAAKDIRQAH 297          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.920e-22
Identity = 65/195 (33.33%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   97 RQKFVQSLQRKVNVAIIDNS-----RFPFTNFMVYPPAPAFG---GVLARDHYYRRPCFVWVVELACKRYFPGHP--PCPVCKSSRGVKRKEWCS---RRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            +++F + ++ K++ +I         RFPF N +V P    F     +   D +Y++   VW+ E      FP     PCP C   +G     W     RR  +      +  F Y+C  CA+ N GK + E+   +F  W AG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH KGF A A+ + Q+H
Sbjct:   45 QERFFEEVKDKIDRSITHEGGGVKGRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFL----FPELQAVPCPGC-GGKGAP-DGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNICQAH 233          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.700e-21
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 1
Query:  160 FPFTNFMVYPPAPAF---GGVLARDHYYRRPCFVWVVELACKRYFPGHPPCPVCKSSRGVKRKEWCSRRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEAL 630
            FP+     +P  P+     G+     +Y +  FVWV E         + PCP C             RR  L D  C L  + Y C  C ++N G+P+DER ++TF  WDAGVL  +  ++ + FPF+LTK++AI  ++V  + DDL+   GF A +++L
Sbjct:    7 FPYNGGWAHPRLPSLHRGAGLPPLGPFYLKKVFVWVPEYLWDEI--EYIPCPHCNKRAQPDGWNTEPRRVFLEDDVCYLIGYRYLCKGCTEANKGRPEDERTTQTFNAWDAGVLATMDDYVSKEFPFVLTKKAAISKSVVDRLADDLLEGTGFAAASKSL 164          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 7.180e-19
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 1
Query:  385 LTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            +T F Y+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH KGF A A+ +RQ+H
Sbjct:    8 VTGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAH 93          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5KGK6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK6_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.920e-18
Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 1
Query:  394 FVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            F Y+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH KG  A A+ +RQ+H
Sbjct:   11 FRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGLSAAAKNIRQAH 93          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.970e-18
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1
Query:  352 RRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            RR         +  F Y+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH K F A A+ +RQ+H
Sbjct:  103 RRVFTEHDVAYVMEFRYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAH 199          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.580e-17
Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  397 VYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            VY+C  CA+ N GK + E+   +F  WDAG L +LP ++ + FPFLLTKRS I++ ++  + D LVH KGF A  + +RQ+H
Sbjct:   11 VYKCAKCAEFNKGKQRAEKCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKNIRQAH 92          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: D7FSB0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB0_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.050e-16
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  394 FVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            F Y+C  CA+ N GK +  +   +F  WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH K F A A+ + Q+H
Sbjct:    3 FRYKCAKCAEFNKGKQEVGKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEIRMVDRLADDLVHGKDFSAAAKNICQAH 85          
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Match: A0A6H5KT01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT01_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 6.000e-16
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  352 RRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDERVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHSKGFKATAEALRQSH 642
            RR  +      +  F Y+C   A+ N GK + E        WDAG L +LP ++ + FPFLLTKRS I++ +V  + DDLVH KGF A A+ +RQ+H
Sbjct:   16 RRVFMDHDVAYVMGFRYKCAKGAEFNKGKQEAETRKTRVNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAH 112          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6325.17211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5L7G9_9PHAE1.630e-2433.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN0_9PHAE1.630e-2233.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP4_9PHAE1.920e-2233.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FIV2_ECTSI1.700e-2133.753'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KTU1_9PHAE7.180e-1948.843'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KGK6_9PHAE3.920e-1848.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDX0_9PHAE6.970e-1843.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA7_9PHAE1.580e-1746.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSB0_ECTSI3.050e-1645.78Uncharacterized protein n=4 Tax=Ectocarpus silicul... [more]
A0A6H5KT01_9PHAE6.000e-1642.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6325contigF-serratus_M_contig6325:23746..25147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.3
Seed ortholog evalue5.9e-19
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons3
Model size651
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6325.17211.1prot_F-serratus_M_contig6325.17211.1Fucus serratus malepolypeptideF-serratus_M_contig6325 23746..25147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931956.0139914-CDS-F-serratus_M_contig6325:23745..238171622931956.0139914-CDS-F-serratus_M_contig6325:23745..23817Fucus serratus maleCDSF-serratus_M_contig6325 23746..23817 +
1690964075.2293942-CDS-F-serratus_M_contig6325:23745..238171690964075.2293942-CDS-F-serratus_M_contig6325:23745..23817Fucus serratus maleCDSF-serratus_M_contig6325 23746..23817 +
1622931956.0565212-CDS-F-serratus_M_contig6325:24321..246931622931956.0565212-CDS-F-serratus_M_contig6325:24321..24693Fucus serratus maleCDSF-serratus_M_contig6325 24322..24693 +
1690964075.2423136-CDS-F-serratus_M_contig6325:24321..246931690964075.2423136-CDS-F-serratus_M_contig6325:24321..24693Fucus serratus maleCDSF-serratus_M_contig6325 24322..24693 +
1622931956.0774846-CDS-F-serratus_M_contig6325:24940..251471622931956.0774846-CDS-F-serratus_M_contig6325:24940..25147Fucus serratus maleCDSF-serratus_M_contig6325 24941..25147 +
1690964075.2508523-CDS-F-serratus_M_contig6325:24940..251471690964075.2508523-CDS-F-serratus_M_contig6325:24940..25147Fucus serratus maleCDSF-serratus_M_contig6325 24941..25147 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6325.17211.1

>prot_F-serratus_M_contig6325.17211.1 ID=prot_F-serratus_M_contig6325.17211.1|Name=mRNA_F-serratus_M_contig6325.17211.1|organism=Fucus serratus male|type=polypeptide|length=217bp
GAGGTTGLGGGGGSAAGSPGSAPQAIQSLDHVRQKFVQSLQRKVNVAIID
NSRFPFTNFMVYPPAPAFGGVLARDHYYRRPCFVWVVELACKRYFPGHPP
CPVCKSSRGVKRKEWCSRRAILRDGSCDLTFFVYQCTVCAKSNAGKPKDE
RVSETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDLAIVREMRDDLVHS
KGFKATAEALRQSHLQA
back to top

mRNA from alignment at F-serratus_M_contig6325:23746..25147+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6325.17211.1 ID=mRNA_F-serratus_M_contig6325.17211.1|Name=mRNA_F-serratus_M_contig6325.17211.1|organism=Fucus serratus male|type=mRNA|length=1402bp|location=Sequence derived from alignment at F-serratus_M_contig6325:23746..25147+ (Fucus serratus male)
GGAGCAGGAGGCACAACGGGGCTAGGAGGCGGCGGAGGGAGTGCAGCTGG ATCACCAGGCAGTGCACCGCAGGTGCTCGTTTTTTGCTTCATTGTTGTCA TGGGACTTTGACTATTGCTTTGCCGTGATATATCGGGACACGTACGCACA GCATGTCGGCAATTGGCTTTTACCCTGTGGTGTAATAGTAACCTTATCAC ATACCTGGTACCAGGTACTTGTACGATGTAATGTATACGAACATGTTGTA CTGGTAATTGACTTTTACCCTTTGGTGTAATACTCATAGTAACCTTATGA TATCATATACTTGTACAATGTACTACTAGCCTATATGATTGTATCTTTAT ACGAGCAAGTTCTACTGGTAGTTGACTTTTACCCTGTGGTGTAACCTTAT CACATACTTGTAGAATCCTCCGAAAGGCTGCCAATCCTGCTTGTGGTCAG CTGAACATCCGCGTTCATGCCTGAGAATTTGGTATCGCGAGACGGTTGTA TCTTGATACGAACAAGTTGTACTGGTATGTACTGTACCGGTAGTCTATTG TTCTTGTGTTTATCCGTATGGTCCAGGCCATACAGTCGCTTGATCATGTG CGGCAGAAATTCGTCCAGAGTCTGCAACGCAAGGTCAATGTCGCCATCAT TGACAACAGCCGGTTTCCGTTCACCAACTTCATGGTCTACCCTCCTGCGC CGGCATTCGGTGGCGTGCTGGCCCGTGACCACTACTACCGGCGCCCGTGC TTCGTGTGGGTGGTGGAGTTGGCGTGCAAGAGATACTTTCCGGGTCATCC ACCTTGCCCTGTTTGCAAAAGCAGTCGGGGTGTCAAGCGGAAAGAATGGT GCTCGCGGCGCGCTATCCTTCGAGATGGGTCATGCGACCTCACCTTCTTC GTGTACCAATGCACCGTGTGTGCAAAGAGCAACGCGGGCAAGCCGAAGGC ATGGCAGATTTTGAAATATCATTTTTTAGGTGGATGTTTTAGGTTGCCTG ATTTTATGCATGCACAAGCGTTGTGCTCAGTAGCCGATAGCTTCGCAGCG ACATAGCATCATCACAAGCCTCCCGTCGGCACTCAAGGTTGAGATAATTC GAACATTGGCGACACGCACCTTTGGATCTAACGTGCTTTACTCTGCTTCG ATTTGCACGATGTCACTGCCCCCCCCATCTCACCGCCGTTACAAGGACGA GCGTGTGTCGGAGACATTCAGAGGTTGGGATGCAGGAGTGCTGGAGCAAC TTCCACTGTTCTTGCAGGAGTCCTTCCCGTTCCTGTTGACCAAGCGGTCG GCAATAGATCTGGCCATTGTACGCGAGATGCGCGATGACTTGGTCCATTC CAAGGGGTTCAAGGCGACCGCGGAGGCTCTACGGCAGTCACACTTGCAGG CC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig6325:23746..25147+

>mRNA_F-serratus_M_contig6325.17211.1 ID=mRNA_F-serratus_M_contig6325.17211.1|Name=mRNA_F-serratus_M_contig6325.17211.1|organism=Fucus serratus male|type=CDS|length=1302bp|location=Sequence derived from alignment at F-serratus_M_contig6325:23746..25147+ (Fucus serratus male)
GGAGCAGGAGGCACAACGGGGCTAGGAGGCGGCGGAGGGAGTGCAGCTGG
ATCACCAGGCAGTGCACCGCAGGGAGCAGGAGGCACAACGGGGCTAGGAG
GCGGCGGAGGGAGTGCAGCTGGATCACCAGGCAGTGCACCGCAGGCCATA
CAGTCGCTTGATCATGTGCGGCAGAAATTCGTCCAGAGTCTGCAACGCAA
GGTCAATGTCGCCATCATTGACAACAGCCGGTTTCCGTTCACCAACTTCA
TGGTCTACCCTCCTGCGCCGGCATTCGGTGGCGTGCTGGCCCGTGACCAC
TACTACCGGCGCCCGTGCTTCGTGTGGGTGGTGGAGTTGGCGTGCAAGAG
ATACTTTCCGGGTCATCCACCTTGCCCTGTTTGCAAAAGCAGTCGGGGTG
TCAAGCGGAAAGAATGGTGCTCGCGGCGCGCTATCCTTCGAGATGGGTCA
TGCGACCTCACCTTCTTCGTGTACCAATGCACCGTGTGTGCAAAGAGCAA
CGCGGGCAAGCCGAAGGCCATACAGTCGCTTGATCATGTGCGGCAGAAAT
TCGTCCAGAGTCTGCAACGCAAGGTCAATGTCGCCATCATTGACAACAGC
CGGTTTCCGTTCACCAACTTCATGGTCTACCCTCCTGCGCCGGCATTCGG
TGGCGTGCTGGCCCGTGACCACTACTACCGGCGCCCGTGCTTCGTGTGGG
TGGTGGAGTTGGCGTGCAAGAGATACTTTCCGGGTCATCCACCTTGCCCT
GTTTGCAAAAGCAGTCGGGGTGTCAAGCGGAAAGAATGGTGCTCGCGGCG
CGCTATCCTTCGAGATGGGTCATGCGACCTCACCTTCTTCGTGTACCAAT
GCACCGTGTGTGCAAAGAGCAACGCGGGCAAGCCGAAGGACGAGCGTGTG
TCGGAGACATTCAGAGGTTGGGATGCAGGAGTGCTGGAGCAACTTCCACT
GTTCTTGCAGGAGTCCTTCCCGTTCCTGTTGACCAAGCGGTCGGCAATAG
ATCTGGCCATTGTACGCGAGATGCGCGATGACTTGGTCCATTCCAAGGGG
TTCAAGGCGACCGCGGAGGCTCTACGGCAGTCACACTTGCAGGCCGACGA
GCGTGTGTCGGAGACATTCAGAGGTTGGGATGCAGGAGTGCTGGAGCAAC
TTCCACTGTTCTTGCAGGAGTCCTTCCCGTTCCTGTTGACCAAGCGGTCG
GCAATAGATCTGGCCATTGTACGCGAGATGCGCGATGACTTGGTCCATTC
CAAGGGGTTCAAGGCGACCGCGGAGGCTCTACGGCAGTCACACTTGCAGG
CC
back to top