mRNA_F-serratus_M_contig632.17197.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig632.17197.1
Unique NamemRNA_F-serratus_M_contig632.17197.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 1.910e-97
Identity = 140/252 (55.56%), Postives = 193/252 (76.59%), Query Frame = 3
Query:  258 SRVAIMTAVAASVLST--TTNALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDC-VQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDRFRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEV 1004
            S VA +TA+A  + +T  +T AL+V+ P+   +V S  PY V W GA  DD FE+DL+YCGSYSFCF + +DCGF+IA++C E+   C +Q++ +++V  PEP+AG+S +GYRVRI+E GTD FRCS DFYL++S D    G  GG +++VV P ++++AVAGE YTVEFDYDNGFG+++GRF IDLY + G+GDCG+WVT++CDKP  GC D++GDYDVVIPA +  G+Y IRVG+FG+D++Y CS  FE+
Sbjct:    3 SSVAFLTALAGVLGNTITSTEALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 3.220e-93
Identity = 140/240 (58.33%), Postives = 184/240 (76.67%), Query Frame = 3
Query:  303 TTTNALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGES-GSDCV-QEESTAEVVMPEPIAGYSGDGYRVRITEAGTDRFRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGD---GDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVV 1007
            T+T AL+V+ P+   TVVS  PY V W GAS DD FEIDL+YCGSYS+CFE+ + CGF++A++C E  GS C+ Q + +++V  PEP+ G S +GYR+RI E G+D +RCS DFYLMSS DA  +G  GG +++VV PT+D++A+AGE YTVEFDYDNGFG+++GRF IDLY + G+   GDCGTWVT++CDKP  GC D+QGDY+VVIP  +  G+Y IRVG+FG+D +Y CS  FEVV
Sbjct:   21 TSTEALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAE-CGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVV 259          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 3.440e-93
Identity = 140/255 (54.90%), Postives = 189/255 (74.12%), Query Frame = 3
Query:  264 VAIMTAVAASVLSTTTNALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCV-QEESTAEVVMPEPIAGYSGDGYRVRITEAGTDRFRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVVPQGEEL 1025
            +A +T +  +++ T T AL+V+ P+   TVVS+ PY V W GAS DD FEIDL+YCGSYSFCFE+ D+CGF++ +LC E    C+ Q++  ++V +PEP+ G+S  GYRVRI + GT+ FRCS +FYLMSS DA+      G +++VV P+S ++AVAG  YTVEFDYDNGFG + GRF IDLY + G GDCG WV+++CDKP  GCHDT+GDYD+VIP  +  G+Y IRVG+FG+D+V+ CS  FEVVP+ + L
Sbjct:    8 IAALTGMLGNII-TDTEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADAS---DQDGPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVPETQGL 258          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.360e-71
Identity = 120/233 (51.50%), Postives = 154/233 (66.09%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDRFR-CSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVV 1007
            +AL+VV P+ G  VV++  YTV+WTG   ++ +EIDLYYCGS   C E  D+CG ++  LC      C   E   ++VMPEP++G SG GY+VR+ +   D    CS +FYLM+  +A   G AGG  + V  P+S   A AGEEYTVEFDYDNG G  VGRF IDLY + G GDCGT++ T+CDKP  GC D+ GDYDV IP    AG+Y IRVG F +D+VYGCS  FE++
Sbjct:    6 SALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGS--MCME--DECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 2.280e-70
Identity = 124/238 (52.10%), Postives = 153/238 (64.29%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGT-DRFRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVVPQGEE 1022
            NAL+VV PS  + VV++  YTV+WTGA D   FEIDLY+CGS   C E  D CG ++  LC      C   E   ++VMPEP++G S  GY+VR+ +    D   CS  FYLM+S DA   G   G  L V  P     A AGEEYTVEFDYDNG G +V RF+IDLY++ GDGDCGT+VT+ICDKP  GC D+ GDYDV IPA T AG Y IRVG F ++ +YGCS  F ++   +E
Sbjct:   18 NALEVVTPSADLIVVADRTYTVEWTGA-DSGRFEIDLYHCGS--MCME--DSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDE 250          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 2.430e-70
Identity = 118/233 (50.64%), Postives = 151/233 (64.81%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGT-DRFRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVV 1007
            +AL+VV P+ G  VVS+  YTV+W+G   +  FEIDLYYC S   C E  D+CG ++  LC      C   E   ++VMPEP++G SG GY+VR+ +    D   CS +FYLM+  DA     AGG  + V  P++   A AGEEYTVEFDYDNG G  VGRF IDLY + G GDCGT++ T+CDKP  GC D+ GDYDV IP    AG+Y IRVG F +++VYGCS  FE++
Sbjct:   19 SALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNS--MCME--DECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 4.340e-69
Identity = 123/233 (52.79%), Postives = 157/233 (67.38%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDR-FRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVV 1007
            NAL+VV+P+ G  VV++  YTV+WTGA+    ++IDLYYCGS   C E  D+CG ++  LC      C   +   +VVMPEP+ G S  GY+V +T++  +  + CS DF L++S +A       GA + V  P+    A+AG EYTVEFDYDNG G  V RF IDLY SGG GDCGT+VTTICDKP  GC D+QGDYDVVIP+ T +G+Y IRVGVF +D VYGCS  FE+V
Sbjct:   18 NALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSV--CME--DECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDYGCSGDFTLIASTEAP-DATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 6.990e-69
Identity = 118/232 (50.86%), Postives = 150/232 (64.66%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDRFR-CSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEV 1004
            NALKV  PS G+TV+++  YTV+WTG S D+ FEIDLYYCGS   C E  DDCG ++  LC      C   E   ++VMPEP+ G SG GY+VR+ +   +    CS +FYL++S +A  +G   G +L+V  P S  +A    EYTVEFDYDNG G  V RF IDLY + G+GDCGT+V +ICDKP  GC D+ GDYDV IP  T AG Y IRV  F +D++Y CS  F +
Sbjct:   18 NALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGS--MCME--DDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 6.000e-66
Identity = 118/234 (50.43%), Postives = 156/234 (66.67%), Query Frame = 3
Query:  312 NALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDR-FRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSG-GDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEVV 1007
            NAL+VV+P+ G++V+++  YTV+WTG SD   FEIDLYYCGS  FC E  D+CG ++  LC      C   +   ++VMPEP+AG S  GY+V +T++  +    CS DF L++S DA   G  G  SL V  P+    A+AG  YTVE+DY+NG G    RF IDLY  G G GDCGT+V T+CDKP  GC D+QGDYDV IP+ T AG+Y +RVGVF +D ++ CS+ FE+V
Sbjct:   18 NALEVVSPAAGISVIADRTYTVEWTGTSDS-RFEIDLYYCGS--FCME--DECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS-GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGY-SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244          
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 2.540e-64
Identity = 121/243 (49.79%), Postives = 158/243 (65.02%), Query Frame = 3
Query:  279 AVAASVLSTTTNALKVVAPSGGMTVVSNEPYTVQWTGASDDDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVMPEPIAGYSGDGYRVRITEAGTDR-FRCSRDFYLMSSVDAALIGVAGGASLDVVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWVTTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPFEV 1004
            AVA  +LS   NAL+VV+P GG++V+++  YTV+WTG +    FEIDLYYC S  FC   DD CG ++  LC      C       +++MPEP++G S  GY+V +  A  +    CS DF L++S DA   G  G  SL V  P+    A+AGE YTVE+DY+NGFG    RF +DLY+ GG GDCGT+VTT+CD+P  GC D+QGDYDV IP+ T AG+Y IRVGVF ++ +Y CS  FEV
Sbjct:    8 AVAFGMLSAA-NALEVVSPDGGISVLADRAYTVEWTGTTTG-RFEIDLYYCNS--FCM--DDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS-GYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KPZ5_9PHAE1.910e-9755.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LEQ9_ECTSI3.220e-9358.33EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE... [more]
D7FN59_ECTSI3.440e-9354.90EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LI46_ECTSI1.360e-7151.50EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FYL2_ECTSI2.280e-7052.10EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JFT9_9PHAE2.430e-7050.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E8_ECTSI4.340e-6952.79Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JRG9_9PHAE6.990e-6950.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F0_ECTSI6.000e-6650.43EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JY62_9PHAE2.540e-6449.79GPI-anchored domain-containing protein n=2 Tax=Ect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig632contigF-serratus_M_contig632:253241..256693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size1610
Cds size786
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931954.0816598-UTR-F-serratus_M_contig632:253240..2538161622931954.0816598-UTR-F-serratus_M_contig632:253240..253816Fucus serratus maleUTRF-serratus_M_contig632 253241..253816 -
1690964074.4104917-UTR-F-serratus_M_contig632:253240..2538161690964074.4104917-UTR-F-serratus_M_contig632:253240..253816Fucus serratus maleUTRF-serratus_M_contig632 253241..253816 -
1622931954.2006075-UTR-F-serratus_M_contig632:256445..2566931622931954.2006075-UTR-F-serratus_M_contig632:256445..256693Fucus serratus maleUTRF-serratus_M_contig632 256446..256693 -
1690964074.4757874-UTR-F-serratus_M_contig632:256445..2566931690964074.4757874-UTR-F-serratus_M_contig632:256445..256693Fucus serratus maleUTRF-serratus_M_contig632 256446..256693 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931954.0974004-CDS-F-serratus_M_contig632:253816..2539591622931954.0974004-CDS-F-serratus_M_contig632:253816..253959Fucus serratus maleCDSF-serratus_M_contig632 253817..253959 -
1690964074.4233675-CDS-F-serratus_M_contig632:253816..2539591690964074.4233675-CDS-F-serratus_M_contig632:253816..253959Fucus serratus maleCDSF-serratus_M_contig632 253817..253959 -
1622931954.1097665-CDS-F-serratus_M_contig632:254667..2548031622931954.1097665-CDS-F-serratus_M_contig632:254667..254803Fucus serratus maleCDSF-serratus_M_contig632 254668..254803 -
1690964074.4341516-CDS-F-serratus_M_contig632:254667..2548031690964074.4341516-CDS-F-serratus_M_contig632:254667..254803Fucus serratus maleCDSF-serratus_M_contig632 254668..254803 -
1622931954.1294754-CDS-F-serratus_M_contig632:255300..2555971622931954.1294754-CDS-F-serratus_M_contig632:255300..255597Fucus serratus maleCDSF-serratus_M_contig632 255301..255597 -
1690964074.4442825-CDS-F-serratus_M_contig632:255300..2555971690964074.4442825-CDS-F-serratus_M_contig632:255300..255597Fucus serratus maleCDSF-serratus_M_contig632 255301..255597 -
1622931954.1587868-CDS-F-serratus_M_contig632:255992..2560861622931954.1587868-CDS-F-serratus_M_contig632:255992..256086Fucus serratus maleCDSF-serratus_M_contig632 255993..256086 -
1690964074.4544387-CDS-F-serratus_M_contig632:255992..2560861690964074.4544387-CDS-F-serratus_M_contig632:255992..256086Fucus serratus maleCDSF-serratus_M_contig632 255993..256086 -
1622931954.1752982-CDS-F-serratus_M_contig632:256329..2564451622931954.1752982-CDS-F-serratus_M_contig632:256329..256445Fucus serratus maleCDSF-serratus_M_contig632 256330..256445 -
1690964074.4647343-CDS-F-serratus_M_contig632:256329..2564451690964074.4647343-CDS-F-serratus_M_contig632:256329..256445Fucus serratus maleCDSF-serratus_M_contig632 256330..256445 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig632.17197.1prot_F-serratus_M_contig632.17197.1Fucus serratus malepolypeptideF-serratus_M_contig632 253817..256445 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig632.17197.1

>prot_F-serratus_M_contig632.17197.1 ID=prot_F-serratus_M_contig632.17197.1|Name=mRNA_F-serratus_M_contig632.17197.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MAFSRVAIMTAVAASVLSTTTNALKVVAPSGGMTVVSNEPYTVQWTGASD
DDLFEIDLYYCGSYSFCFEQDDDCGFYIADLCGESGSDCVQEESTAEVVM
PEPIAGYSGDGYRVRITEAGTDRFRCSRDFYLMSSVDAALIGVAGGASLD
VVVPTSDSVAVAGEEYTVEFDYDNGFGDRVGRFNIDLYVSGGDGDCGTWV
TTICDKPGKGCHDTQGDYDVVIPASTTAGLYVIRVGVFGEDAVYGCSQPF
EVVPQGEELWN*
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mRNA from alignment at F-serratus_M_contig632:253241..256693-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig632.17197.1 ID=mRNA_F-serratus_M_contig632.17197.1|Name=mRNA_F-serratus_M_contig632.17197.1|organism=Fucus serratus male|type=mRNA|length=3453bp|location=Sequence derived from alignment at F-serratus_M_contig632:253241..256693- (Fucus serratus male)
AAATTATAAAACAGCCACTCGCGGAGACAACATGAGGTTACCCCTGCCAC TCAGGACACACCAATTCCTTCCACCTAGTGCGCAAACGCTCTTCTCATTG ACCAGCTCGAGTAGCGCTGCAAGCAGAAACCGACATATTCTGTGCATTGT GGCCGTAGGATATACACGGAAACTGCTACTACAAAGCAGGACCTGGACAC ACCATCCCATCTCAACACACACGAAGTTCGAGACGGCAACAGATAACAAT GGCTTTCTCCCGAGTCGCTATCATGACTGCAGTCGCGGCGAGTGTACTCA GCACAACGACCAATGCGCTTAAGGTCGTCGCACCCTCAGGGGGCATGACC GTCGTCTCCAACGAGTGAGTATTTGTCCAGAGCCGCAGCTTGTCCGATGG CGTCGCCTGTATTGACTCGACAACTTTTTTTGCTCGATAGATACCGTAAC CAACTGTGTTGCTGTCGTCGGTCACGTCGATGTACCAGCAGTCCTTGGTA GCGAGAAAATGATATACATCACGAACCGTCGACCTCATCTCCTGAACTGT TTTCATTCACTGTCTCTTGTTCCCCTCCCCGGCCACTACTGCTGGGCTTT GTTTCAGACCGTACACTGTGCAATGGACTGGTGCATCGGACGACGACTTG TTCGAGATCGACCTCTATTACTGCGGGTCCTACTCCTTCTGCTTCGAGCA GGTCAGTCTGAGTGCAGAGTATTTCGGTTTTGTCAAGGACATAAACTGTG GAGTAGTCCGCTCGCGTCAGATACGAGTTTGATAGTTGCTCGCCGCAACA GCATGTCAGAGTCACGTGGTTGCAATGTTTAGGGCATCCGCAGTACCAAG GGAACATGTACACACTGCAGTAAAACTTCTTATTATTACTGTACCACAGT ACCTGGTAGTACAGAACAGTCCTACAGCTAAAGTATTTGAAGTTTCCTCT TCAGCGTACCTCTGGAAGGACTGGCAGTCATAACTGTTGATGCCCTGTCT GCTCAACATCATGGCTATGTGCTGATATCCATCTACCCCCAAGCTGTCTC TCATCAAGCCCAAACCAAACTCCATTCCTCCCTGTTGGGTCTACAGGACG ATGACTGTGGCTTCTACATTGCCGACCTCTGCGGCGAGTCGGGCTCCGAT TGTGTTCAAGAAGAGAGCACCGCCGAAGTCGTTATGCCCGAACCGATCGC CGGGTACTCTGGCGACGGTTACCGGGTGCGCATCACTGAGGCCGGCACTG ACAGGTTCCGCTGCTCGCGAGACTTTTACCTCATGAGTTCGGTGGATGCC GCTCTTATCGGGGTGGCCGGAGGGGCATCGTTGGATGTTGTTGTGCCCAC TTCCGACTCCGTAGCTGTGGCTGGCGAGGAGTACACCGTCGAGGTAGGTT AGGAGGTCAATCTTACGTCCTGCGTGCGTGTACCAAAAAACAGTTCCTAT TAACAAGTCACAAACAGTACAGCAGTAGTCTAGGTCCTCACTCCTTATAG AAAAGTCTGAACGCGTAAATCGAATGAAAACGTAAAGTATATTTTATATT TTACGTGAAATGTATAGAGCTATATCAGTTGGCATGCGGTAAAATTGAGG TCCTTCACATCTATGACCCGGTCCCTACAGCCAATGTTCCCACCTGAACC TTTTGACTAATTGGAAGGTTTAGATGCTTTCAGATTTTTCTCGAAAATCC TATGAACAGTGATTTTTTTCCTACAACCAATGTTCTTCCCTGAACGTTTG GACATTTTTCCCCCCTGACTGGGTTCAGCGCTTGTGCCGAAACGTGTTCT TATTTTGGAACACACCAGATAAAACATGAAAACACCATCCCTCACGCCGC GGTTTGTCTAATGATACTCGCTGCGTTTTCTCCGTAACAGTTTGACTACG ACAACGGCTTCGGGGACCGCGTGGGGCGCTTCAATATTGATCTGTACGTT TCCGGGGGCGATGGTGACTGCGGCACCTGGGTCACAACCATCTGCGACAA GCCGGGGAAGGGATGCCATGACACCCGTGAGTGGAAAACCTCTCTTCTCA GTGTCAACTCTCAGCAATGTGCTCTAGGCCGGGTCCCAGCCTTTTATTAA GCTTATTATATATTATCAAGTTACCAGGTACTGCTGTACTGTAGTATGTA TATACGTATGTATTGGTCATCACACATACCGTATAGCAAGAGTAAGGATC AACCGGGTAAGGTGGCCAATCCTGCTCGCGGTCAGCTGAACAGAGAAAAT CAATATTCCCCTGTCCCCGTTCGCGCCTGAGAAATTGGTCTCGCGAGACG GCGTTTAGCCACCCGCCCCGCTTCAGCCTGCTCATCCTCCATACTCACTC TAAACTTACGGGATTCCTCCCGATTTCCTCGGTATGGCGTCATTTTATTT ATTAAAACCGTCATACGCCATTGGGTCAGTCCCGAGTGTATCGGGTCTCG CAATTGCGTACCGATGGCGTTCACTGCTGGGAGTTCGCCGGCACAGGGCC AACAGTAGTAGTCCCCAAGGTAGTTCCAGAAACGGGTGCTGCCTTTTTGC AGGTACCATGGACCAATCAAAGCGCGCCTCTATTTTCTCAAACCCAATAT TGGTATGAAGTGGACATGCTGACTCATACATAATACATTATATATATATA TAATATATATATATATATAATATGTCACCCGGAGAGTCTCTCGTAGTAAC AAAAAAGCCTCATCCTATCCTGTGATTTATGCAGAGGGGGACTACGACGT CGTCATCCCAGCGTCGACTACTGCAGGGCTCTACGTGATTCGCGTTGGAG TCTTCGGAGAAGACGCTGTCTACGGGTGCTCTCAACCATTTGAGGTGGTA CCGCAAGGAGAAGAGCTGTGGAATTAGACTAAGGATGAAACATAACAACT CCTGAGTCTTCATCTGGCAAGTCTCGGGTCGACCGAACCATGTTTTGGCG CCGCTTCACAATAATGTAGAATAAGTTAGGAAATGAGCGTCATCAAGCCC GTCTTGGCGGGTGAACGTATGCGTCATTAGTCTTCGGGATAGGTTTTTGA AAGGCCATGGGCGGATGAGCATATATTTTTGCTGTAGATGCAATTGCCTG TTCTCAGGTACCATGTAAAGTGATGCCTTCGTTACATGAGTTAATAATGA TATTGATGCTTTCTGTGTCGAAAGTTGTGGTAGCCACCTTTCCCTTGGGA TGTGGTGAGAACTTGGTGTCGCATTGCTAACCCGCTCGTATATGTAAGGA ACCCACGATGTCTTTTCGTTAGTCCGATCGATCTTGAATTCGATAGACCA TGGTGTTTTTGTGTGTAAGTTCCGTGGAGGTGTCCTGCAGGCGTAGAGAA GCAGAGTGGTGTTACCGGGTCAAAGTTAAAGGCGAGGAAGGAGGGCTGAT GTGAAAGGCCGAAACGGAGTCGGCCGTAGAGCAGTTGTTGAAGAAAAACC GAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig632:253241..256693-

>mRNA_F-serratus_M_contig632.17197.1 ID=mRNA_F-serratus_M_contig632.17197.1|Name=mRNA_F-serratus_M_contig632.17197.1|organism=Fucus serratus male|type=CDS|length=1572bp|location=Sequence derived from alignment at F-serratus_M_contig632:253241..256693- (Fucus serratus male)
ATGGCTTTCTCCCGAGTCGCTATCATGACTGCAGTCGCGGCGAGTGTACT
CAGCACAACGACCAATGCGCTTAAGGTCGTCGCACCCTCAGGGGGCATGA
CCGTCGTCTCCAACGAATGGCTTTCTCCCGAGTCGCTATCATGACTGCAG
TCGCGGCGAGTGTACTCAGCACAACGACCAATGCGCTTAAGGTCGTCGCA
CCCTCAGGGGGCATGACCGTCGTCTCCAACGAACCGTACACTGTGCAATG
GACTGGTGCATCGGACGACGACTTGTTCGAGATCGACCTCTATTACTGCG
GGTCCTACTCCTTCTGCTTCGAGCAGACCGTACACTGTGCAATGGACTGG
TGCATCGGACGACGACTTGTTCGAGATCGACCTCTATTACTGCGGGTCCT
ACTCCTTCTGCTTCGAGCAGGACGATGACTGTGGCTTCTACATTGCCGAC
CTCTGCGGCGAGTCGGGCTCCGATTGTGTTCAAGAAGAGAGCACCGCCGA
AGTCGTTATGCCCGAACCGATCGCCGGGTACTCTGGCGACGGTTACCGGG
TGCGCATCACTGAGGCCGGCACTGACAGGTTCCGCTGCTCGCGAGACTTT
TACCTCATGAGTTCGGTGGATGCCGCTCTTATCGGGGTGGCCGGAGGGGC
ATCGTTGGATGTTGTTGTGCCCACTTCCGACTCCGTAGCTGTGGCTGGCG
AGGAGTACACCGTCGAGGACGATGACTGTGGCTTCTACATTGCCGACCTC
TGCGGCGAGTCGGGCTCCGATTGTGTTCAAGAAGAGAGCACCGCCGAAGT
CGTTATGCCCGAACCGATCGCCGGGTACTCTGGCGACGGTTACCGGGTGC
GCATCACTGAGGCCGGCACTGACAGGTTCCGCTGCTCGCGAGACTTTTAC
CTCATGAGTTCGGTGGATGCCGCTCTTATCGGGGTGGCCGGAGGGGCATC
GTTGGATGTTGTTGTGCCCACTTCCGACTCCGTAGCTGTGGCTGGCGAGG
AGTACACCGTCGAGTTTGACTACGACAACGGCTTCGGGGACCGCGTGGGG
CGCTTCAATATTGATCTGTACGTTTCCGGGGGCGATGGTGACTGCGGCAC
CTGGGTCACAACCATCTGCGACAAGCCGGGGAAGGGATGCCATGACACCC
TTTGACTACGACAACGGCTTCGGGGACCGCGTGGGGCGCTTCAATATTGA
TCTGTACGTTTCCGGGGGCGATGGTGACTGCGGCACCTGGGTCACAACCA
TCTGCGACAAGCCGGGGAAGGGATGCCATGACACCCAGGGGGACTACGAC
GTCGTCATCCCAGCGTCGACTACTGCAGGGCTCTACGTGATTCGCGTTGG
AGTCTTCGGAGAAGACGCTGTCTACGGGTGCTCTCAACCATTTGAGGTGG
TACCGCAAGGAGAAGAGCTGTGGAATTAGAGGGGGACTACGACGTCGTCA
TCCCAGCGTCGACTACTGCAGGGCTCTACGTGATTCGCGTTGGAGTCTTC
GGAGAAGACGCTGTCTACGGGTGCTCTCAACCATTTGAGGTGGTACCGCA
AGGAGAAGAGCTGTGGAATTAG
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