mRNA_F-serratus_M_contig632.17180.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig632.17180.1
Unique NamemRNA_F-serratus_M_contig632.17180.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig632.17180.1 vs. uniprot
Match: D7G1M2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M2_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 6.670e-79
Identity = 139/230 (60.43%), Postives = 170/230 (73.91%), Query Frame = 3
Query:  645 EVAYDALTYAGLMTAGPFFVSREDVGFAHPAVVLNVDKMACYIAEKILDIDIDVWRRRGGDLTAGAGTVGNRKPGVGIEEINFSQNEDSASHVAALRVQDMTLAAARVALRKIRTDLCSSLGVEGSGGKGNKGDAHLEASLVILSSATASALHLSELLLPVRAMETLLTIDFAEPVRTDASQAERISNDSGIASA---LGLLEGSSLPLVVHDEALHAWLVQQNDRRIED 1325
             VA  ALTYAGLMTAGPFFVSR+D+GF  P++VL++DKM CY+AEKILDID+D+WRRRGGD  AGAGTVGN KPGVGIEE NFSQ+E S SH AALRVQDMTLAA R ALRK+R +L  S   EGSG            S+VIL+SAT +A HL ELLLPVRA+ETLL++DF+ PV+TD    ++++      +A   LGLL G S P+V+  +AL  WLVQ +D + +D
Sbjct:   12 RVAMTALTYAGLMTAGPFFVSRKDLGFGSPSLVLDMDKMGCYVAEKILDIDLDIWRRRGGDEAAGAGTVGNNKPGVGIEERNFSQDERSVSHSAALRVQDMTLAAGRAALRKLRAELRHSGDGEGSG------------SVVILASATTNAQHLGELLLPVRAIETLLSLDFSRPVKTDVGLGQQLAVGDAAGAAVEGLGLLPGGSSPIVITGDALEDWLVQPDDVKGQD 229          
BLAST of mRNA_F-serratus_M_contig632.17180.1 vs. uniprot
Match: D7G1M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M1_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 5.230e-64
Identity = 119/169 (70.41%), Postives = 131/169 (77.51%), Query Frame = 3
Query:  204 WRREIKKDAEDVSRAGLRKLRQQFDEGASVGEMIATFVHDVIVDNQELLTTEASVIIQACPRLAEAAEAGELSAALSSSARSNAG--SEFLLQTLDAEVVAELRTPWAAAVKKWRQKALAVEKYRSTNPTANAVVYTYMTNCCLRQGMWEVAYDALTYAGLMTAGPFFV 704
            WRRE  + AE  SRAGLR LR+Q DEGA   + I T  +DVIVD QELLTTEASVI+Q CPRLAEAA+AGEL A LSSSA + AG  S+FLL+ L+ EVVAEL TPW  +VKKWRQKALAVEKYRSTNPTANAVVYTYMTNCC RQGMWEVAYD     GL    P F+
Sbjct:   37 WRREGGQAAEGESRAGLRALRKQIDEGAPASQTIGTIANDVIVDGQELLTTEASVILQRCPRLAEAAKAGELLAGLSSSANTRAGGESDFLLENLEKEVVAELDTPWDVSVKKWRQKALAVEKYRSTNPTANAVVYTYMTNCCCRQGMWEVAYDG----GLSCLAPRFL 201          
BLAST of mRNA_F-serratus_M_contig632.17180.1 vs. uniprot
Match: A0A835YY85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY85_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.160e-26
Identity = 83/207 (40.10%), Postives = 107/207 (51.69%), Query Frame = 3
Query:  540 RQKALAVEKYRSTNPTANAVVYTYMTNCCLRQGMWEVAYDALTYAGLMTAGPFFVSR-EDVGFAHPAVVLNVDKMACYIAEKILDIDIDVWRRRGGDLTAGAGTVGNRKPGVGIEEINFSQNEDSASHVAALRVQDMTLAAARVALRKIRTDLCSSLGVEGSGGKGNKGDAHLEASLVILSSATASALHLSELLLPVRAMETLLTID 1157
            + +ALAVEKYR TNP   A +Y+YM N C+ QGM +VA +ALTYAG+  AGPFFV+    +G    A VLN D+M+ YIAE                                       QN++S SH +ALRVQDMTLAA RVALR++   L +    EG               LVIL+S    +  L E+LLPV  ++ LL +D
Sbjct:   76 KSQALAVEKYRCTNPQYVAGIYSYMANTCIYQGMPDVANEALTYAGMPPAGPFFVTAGTKLGDGTTATVLNCDRMSAYIAE---------------------------------------QNDESTSHESALRVQDMTLAAVRVALRQLLPKLQAGGQYEGQ-------------DLVILASCRRGSQPLQEILLPVNRIKLLLMLD 230          
BLAST of mRNA_F-serratus_M_contig632.17180.1 vs. uniprot
Match: A0A0G4E8S9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4E8S9_VITBC)

HSP 1 Score: 119 bits (297), Expect = 1.590e-26
Identity = 73/170 (42.94%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  501 ELRTPWAAAVKKWRQKAL-AVEKYRSTNPTANAVVYTYMTNCCLRQGMWEVAYDALTYAGLMTAGPFFVSREDV-GFAHPA--VVLNVDKMACYIAEKILDIDIDVWRRRGGDLTAGAGTVGNRKPGVGIEEINFSQNEDSASHVAALRVQDMTLAAARVALRKIRTDLC 998
            E  T W  AV++WR+K   +  KYR TNP   A VYT+M N  +  G WE A DALTYAGL+ AGPFFV      G + P    V ++D++A Y+AE +LD+DI            G+G     K   G+EE++  Q +++AS   A  V+DM  AAARV LR    DLC
Sbjct:   45 EKPTGWEDAVRRWRRKTQGSAFKYRITNPVGTAGVYTWMVNVLVHHGQWETARDALTYAGLIPAGPFFVKPASAFGLSAPGDPPVYHLDRLALYVAESMLDVDI------------GSGQRDGEKRVTGLEELHCGQMDEAASVEGAAAVKDMAYAAARVGLR----DLC 198          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1M2_ECTSI6.670e-7960.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1M1_ECTSI5.230e-6470.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YY85_9STRA1.160e-2640.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4E8S9_VITBC1.590e-2642.94Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig632contigF-serratus_M_contig632:48787..56401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-26_000950.1
Exons8
Model size1653
Cds size1272
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig632.17180.1prot_F-serratus_M_contig632.17180.1Fucus serratus malepolypeptideF-serratus_M_contig632 48843..56076 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931950.5970125-UTR-F-serratus_M_contig632:48786..488421622931950.5970125-UTR-F-serratus_M_contig632:48786..48842Fucus serratus maleUTRF-serratus_M_contig632 48787..48842 +
1690964072.6026266-UTR-F-serratus_M_contig632:48786..488421690964072.6026266-UTR-F-serratus_M_contig632:48786..48842Fucus serratus maleUTRF-serratus_M_contig632 48787..48842 +
1622931950.8093312-UTR-F-serratus_M_contig632:56076..564011622931950.8093312-UTR-F-serratus_M_contig632:56076..56401Fucus serratus maleUTRF-serratus_M_contig632 56077..56401 +
1690964072.7301326-UTR-F-serratus_M_contig632:56076..564011690964072.7301326-UTR-F-serratus_M_contig632:56076..56401Fucus serratus maleUTRF-serratus_M_contig632 56077..56401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931950.6142612-CDS-F-serratus_M_contig632:48842..489521622931950.6142612-CDS-F-serratus_M_contig632:48842..48952Fucus serratus maleCDSF-serratus_M_contig632 48843..48952 +
1690964072.6151717-CDS-F-serratus_M_contig632:48842..489521690964072.6151717-CDS-F-serratus_M_contig632:48842..48952Fucus serratus maleCDSF-serratus_M_contig632 48843..48952 +
1622931950.6339018-CDS-F-serratus_M_contig632:52333..525261622931950.6339018-CDS-F-serratus_M_contig632:52333..52526Fucus serratus maleCDSF-serratus_M_contig632 52334..52526 +
1690964072.6241295-CDS-F-serratus_M_contig632:52333..525261690964072.6241295-CDS-F-serratus_M_contig632:52333..52526Fucus serratus maleCDSF-serratus_M_contig632 52334..52526 +
1622931950.6589134-CDS-F-serratus_M_contig632:52788..529701622931950.6589134-CDS-F-serratus_M_contig632:52788..52970Fucus serratus maleCDSF-serratus_M_contig632 52789..52970 +
1690964072.634248-CDS-F-serratus_M_contig632:52788..529701690964072.634248-CDS-F-serratus_M_contig632:52788..52970Fucus serratus maleCDSF-serratus_M_contig632 52789..52970 +
1622931950.682697-CDS-F-serratus_M_contig632:53237..533561622931950.682697-CDS-F-serratus_M_contig632:53237..53356Fucus serratus maleCDSF-serratus_M_contig632 53238..53356 +
1690964072.65291-CDS-F-serratus_M_contig632:53237..533561690964072.65291-CDS-F-serratus_M_contig632:53237..53356Fucus serratus maleCDSF-serratus_M_contig632 53238..53356 +
1622931950.7119-CDS-F-serratus_M_contig632:54179..543011622931950.7119-CDS-F-serratus_M_contig632:54179..54301Fucus serratus maleCDSF-serratus_M_contig632 54180..54301 +
1690964072.672567-CDS-F-serratus_M_contig632:54179..543011690964072.672567-CDS-F-serratus_M_contig632:54179..54301Fucus serratus maleCDSF-serratus_M_contig632 54180..54301 +
1622931950.7331367-CDS-F-serratus_M_contig632:54639..547981622931950.7331367-CDS-F-serratus_M_contig632:54639..54798Fucus serratus maleCDSF-serratus_M_contig632 54640..54798 +
1690964072.6847665-CDS-F-serratus_M_contig632:54639..547981690964072.6847665-CDS-F-serratus_M_contig632:54639..54798Fucus serratus maleCDSF-serratus_M_contig632 54640..54798 +
1622931950.7522223-CDS-F-serratus_M_contig632:55372..555611622931950.7522223-CDS-F-serratus_M_contig632:55372..55561Fucus serratus maleCDSF-serratus_M_contig632 55373..55561 +
1690964072.6981285-CDS-F-serratus_M_contig632:55372..555611690964072.6981285-CDS-F-serratus_M_contig632:55372..55561Fucus serratus maleCDSF-serratus_M_contig632 55373..55561 +
1622931950.773865-CDS-F-serratus_M_contig632:55878..560761622931950.773865-CDS-F-serratus_M_contig632:55878..56076Fucus serratus maleCDSF-serratus_M_contig632 55879..56076 +
1690964072.7159605-CDS-F-serratus_M_contig632:55878..560761690964072.7159605-CDS-F-serratus_M_contig632:55878..56076Fucus serratus maleCDSF-serratus_M_contig632 55879..56076 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig632.17180.1

>prot_F-serratus_M_contig632.17180.1 ID=prot_F-serratus_M_contig632.17180.1|Name=mRNA_F-serratus_M_contig632.17180.1|organism=Fucus serratus male|type=polypeptide|length=424bp
MKTVQVQLPSKPWCVSPNLSGVTMNSRGSRVRSLAARQEQVGAESNKRAW
RREIKKDAEDVSRAGLRKLRQQFDEGASVGEMIATFVHDVIVDNQELLTT
EASVIIQACPRLAEAAEAGELSAALSSSARSNAGSEFLLQTLDAEVVAEL
RTPWAAAVKKWRQKALAVEKYRSTNPTANAVVYTYMTNCCLRQGMWEVAY
DALTYAGLMTAGPFFVSREDVGFAHPAVVLNVDKMACYIAEKILDIDIDV
WRRRGGDLTAGAGTVGNRKPGVGIEEINFSQNEDSASHVAALRVQDMTLA
AARVALRKIRTDLCSSLGVEGSGGKGNKGDAHLEASLVILSSATASALHL
SELLLPVRAMETLLTIDFAEPVRTDASQAERISNDSGIASALGLLEGSSL
PLVVHDEALHAWLVQQNDRRIED*
back to top

mRNA from alignment at F-serratus_M_contig632:48787..56401+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig632.17180.1 ID=mRNA_F-serratus_M_contig632.17180.1|Name=mRNA_F-serratus_M_contig632.17180.1|organism=Fucus serratus male|type=mRNA|length=7615bp|location=Sequence derived from alignment at F-serratus_M_contig632:48787..56401+ (Fucus serratus male)
GCGCATTCTGTGACGCGTTCGTCGCCATTTTCGGTGCCTATAGGGTCGCG AATGTCATGAAAACAGTCCAGGTGCAACTGCCATCCAAGCCCTGGTGTGT GTCGCCCAACTTGTCGGGTGTTACGATGAACTCAAGAGGGTCAAGAGTTC GATCGTTGGCTGCGAGGTATGACTCGGGAAATTTACTGGTCTGCACGACG TCATTTGTACCCGTGCATCATCGAACTCGAAACTCCAACGCTGTATTTGT CCAGTACGGTTGCTGGTTCGTATTTGAAACATGTCATTATCCTGGTACAT ATCTTTCTTTTTGTACAATTATTTCCGCTTTCTCTTTGTGTGGAGAGTAG TACCAGAGTACGTCGTACGTTCTTTTCTTCAGTCTTGTGACCACGGGCTG GATTTTTATTATGTGAGAATTCAATTAATCAACCCTGTCTATTGATAGAT TGATTGAATTCTCACATAAGCTGATGTCAAAAAAACAAAAACCCAGCCCA TGGTCACAAGGTAGAAAACACCATTCGGAAGGAAAGGACCAGAAGGTCTA GGTGTATTCAGATTTTTCTTCAAACGTACGACGTACTCTCCATACAAAGA GAAAGCGGAAATGGTATGTTACAAGAGATACTCGAAAAAAATATATACTA CTGTAATAATAGTAGTACTGTACTAGCTTCAGATAAAAGGGCTTATTTTC TTATTTTGAGTGGAATACCAGTACGTCCTCTTACCTGTTGCTAGAAAATA TAAATATTTCAACAGCTTTTGCCCAAGTATTAGTCATATAGCACTATATC CATAGACTATAATAGTCATCAAATGAATCCAAGATTGGAGCTCTTCGACC TACTAGGACATATAATTTAAATGGTTGGAGAGCTGGCACTACGACTCTGG ACAACGGGTTTAAGGGGAGGCTGGAGGTCTTAGGCGTTGGTGATGTGGAG CCTATCTGTCATATTGTTTTTGCAGCCGAAGCTCCTTAATCGTGTTAGGT CTTACGTGGACCTGTAGAGTTTCAGGAGCTCTCGCGTTTGCAGTAGACCT AACAGATAGTAAGGAAGGTTGTCCGCCTACCTGCTCCTCATTTCCTTTCG CGACCTACGGCCCTCCATTGCTTCGTCTATTTTCAGGTGAACAACGATTT TTGGTATTTTCTGGATTATGTTGAAGACATGTAGTCTATCTGCCGGTCGC CCTCTTCAGCTTTCTTCAAATCAAATACGGTTGTATACTATACCTAGTCT GATATTGCTCTTGGTTTTATCTTGGTGTCCCTACATGGCGATTGATATCA GATATCAGTGTACAGTAAGTATAACGGTGGTTTCTCCCCGATAATATAAT GTTGACCCTATGTAACTACATTGGGGAACCCTTCTAATATCATGTACCTG GTAGAGGTTTTTGTCCCTACAGCCAATGTAATGTTCCCATCTAAACCCTT TGACTGATCAGAAGGTTTAGATGCGTGCAGATACTCTTTAAAATCAATCA ATCGTAAGATTTCAAGTACTGTATCATGTTGCCACCACAGCGCACACTTC AACCAACCAACTACCGTGTATTAATAAAAGAGCCTAATATTGTACCTACG TGTATGTTCTACAATGGACTCCGATTCACCACTATTTGAACCCGATCCCT AAACCCAATACTGTACCACATACAATAGTATAATTGAGTTGTACTCTTCT CATCAGTACCGGTCGCCCGGGTGATTCAGTTGGTAACCTCGACACCTTTT GACGTTGGGACGGGAGTTCGAATCCCGGTAAATGGGATTTTTTCTCACAA AATAAAAATAAAAATGTCCAACAAGTAGAGAACGATTAGACTATTTCGTT AGTACACAAATTTCGACTTCACGGTCGACGAGGGAAAGGAACGGTTGAAT CCTTCACGCGATAAAAATTAAGGCAAGCACCGCAGAAGGAAGGTGGAGAA ATCATGTGTGACCTTCCTCCTGTGTGACCCCGGCCGTGGTATGTCTACAA GTCTGACGTCCAGAATAAATGGGATGTCAGCACACACACGCACATGGTGT GCATTTGCCTCTATTATGGTACAGTAATCATATCTGTATGACGATTAATA TGTAAGCGTGGAGTATAACGGTGGGTTCGATATTTAGTACTCTGTATACT GTTGGGTACTATATTAATAGTCTATACTATTAATACTACCATTGGGGAAC GCGATTATATCCCATGGAGAGCTCTTTAAAGAAAAATCTGAACGCATCTA GACCTTCTGATCATACTGTACCCCAGTCCAGTCAGGGGGGGGAATATTCT TGCAGCCAACGTTCCTCCCTAAACCGTTTTGACAAATTCCCCGCCTGACT GGGTTTAGATGTGATAGTTCAGATTTTTCTTTAAACTTTTCTCACTACTG TACTGTGGTAGGCATCAATCACATGCTCAATTGACTATTCACAACAAGTT CAGACGCCAGCACGGCAGTATGTATCAGCAGTATACGGCTGTTCTCTTGC ATAATATTTGACGCTCTTTATTCTGGGTCACACCGGCTTTTAGAGCCACG TACTCATCGATCGCAAGGACTCCCCGCGTGACGCAAGAGAAGAGAGGTTT TGCACGAACGACAGGGAGCTAGCTACACCCACAAGTAGGATGACAGCAGC TATTCGGTCTGAATCTCGACGCATGATGACGGATCGTCGGAATTTCGAAT TCATTCTAAAAGTGGCAATTGTACTGCTTAGCATTTAGCCAAGCCTCCCT ACGCGCATGATGCCGTGCATATACGTCCTTTCACGTGCTAACCTGTTCCC CACATTGACACCTGATTGATGCTGTATGTAATACACCTTTTTAGTATATG AAAATACAAAACACTGTACTCTACAAGCTTCGCCTTCGGGACGACTCCCC GCGATCCAGCCAAGACGAGGTTTGCGTACACGGGTATCAAGGAACTGTTA GTAGACATCGTTCTTTGTGCGAAATATTTCGCACTTCCGCAATCTCCTGG GTACACCCCCTACCGGAAAAGGCATAGACTACTACTGTTTGTACTGGTTG TATGCACATATCGGTCTGTTGGCAAGTTTTGAGCCTGGCGTGCGTGAATC TATGACAGCACTACACAGAGCAAGGTAAACGATTCTGCTGGCCGAGGTGT ACTACTATACTAGTCTATACTATACTTCGGAGGAATACGGTCAAACGAAT TTGTGGGACGGTCCGAAGCCCCTCAAAACGCGTGCGAAGTCTAGCTGCTT GTTCCCACGAAGCCAGTTTATCCGGCGCGAGTCGTGCTGTCGCGACGTGG GTGTCAAAATTGAGATCGGGCCGTTTCCCGGCGCATCTCGAGCCCAACAT TGCCCGGGGAAATGCTTCTGTACGATCTGTATAGAAAAAAATAGAAAGCA GGCCACCTGATCTAAACCCTTTTGATAGACTGCTCTCGCGCGTCCTTATT TTGTCTTTCAAGCCTTTCTTCGTTAACCAAATGCGCACTAGCAATATTAA CAGTCACAAGAGACTAGAATCGCGACTTGTCTCGACATAATATGCAGACA GGAACAGGTGGGTGCCGAGTCCAACAAGCGAGCGTGGCGACGCGAAATAA AGAAGGACGCCGAGGACGTTTCCAGGGCGGGACTACGGAAGCTGCGGCAG CAGTTCGACGAAGGTGCTTCGGTGGGGGAAATGATCGCAACCTTCGTGCA CGACGTGATCGTTGATAACCAGGAGCTCTTGACGACCGAGGTGATGTACG GTATACGACGGTCCGTTGCGACCTCTGTCTTAATCATGGGCACGATGACT AACTTACGATGACGAACTTGATATCTGCAAGGTACCTCGTCTGTGTGGAA CCTTAGTTTTTGAGCTTTACTCGCGCTCTGGCTGGAGATAGGGCTGCATA AACCTCACCTCTCTCGATCCTTTCGCTTTCCCCCTACTCTAAACCAAAGG TCTTACGTATCCTCAATATTGTGGGTGCTTCCTGCTTGCGCACCCCTCTC AGGCAAGCGTCATCATCCAGGCTTGCCCGCGTTTAGCGGAGGCAGCCGAG GCGGGAGAACTTTCCGCGGCGCTGTCGTCCTCGGCACGCTCGAACGCCGG AAGCGAATTCCTGCTGCAAACCCTGGACGCAGAAGTCGTCGCCGAGCTGC GTACGCCTTGGGCTGCTGCGGTGAAGAAATGGAGGTGGAACGGCTGAGAA ACAGCAAAAACATCAACCGCGTCGTGATGATGACAGGCCAAGTCTGCCGC CCCCCACGTGCATGGGGTTCATTTCAATTGTAACGCAACTCGGTTCAGCG TTAGTTTATAAGACAGGCATACCGATGGATGCGTTTTTCCCCGATCAAAT ACAGCCAACCATCCACAGACTGTAACGCTTTTAACGGAGGATCCATGGAA ATAATTAGTTCCTTCTTCGCGCGGTCATCGTCCCCCTGCCAAAATGTGAA GGCAGAAAGCCTTGGCGGTGGAGAAGTACCGGAGCACGAATCCGACGGCC AACGCTGTCGTCTACACCTACATGACTAACTGCTGCCTCAGGCAGGGCAT GTGGGAGGTGGCATACGACGGTGAGGTGTGGGAACGAAACCGAAGCTGTC ATCGCGTCGGCGTAGCAAGATACTCCAAGCAGCCCAGCCTTGAGACAGAG GCATCTCAAGATGCCCTCTGTACCTTTGGCGATAGGATGTCTCACGCCCC GGGAATGCGGGACTAGTTTACCCTATCGATTTCTCCGATGATGGGGTTTG GAGCAGACGTGTCAGGGATCGCGTTTGGGACGGCCCCGCCGGGTCTTTCC AAAATTCCGAGATTTTGGTGTTTCGGGGGGGGGGGGCTGTCGGCCTTGCT GTCGCGAGAGCAGGGGAGGCAATATTCCGAACCGCACGAGTCTGTCATAC CCTTCGTACAAATAATACTCTGAAAAACTTTACAGCTTGTATCCGTTCTC ACGTTCACGTGGAATGCCGGGCGGCATCAGACAACATCTGAGTCAAATTG CCTACTGTACACGACGCCCCGGGTCATGATTTTCATCGTCGTCCGTGGGC GTTGGGGCACTTGAGGGAGAGGGAGCTCAGCAGTCCACAATAGCCAGCGA AGTCAAAATCGTCCTCGATGAAAGCACGTAGGAGAGAGCTTTTACCGCGG TAAAAATGGCCCACCTCATAGAGAGTGGACATTTCCGCCTTGGTTTTCCG TGGAAGGGCCAAGTTAAGGTAGCAGGGAGCTAGTGTCGACTGTGTTTTCG GGAACCGCCCGAGCTCCACGACACCTCCGATGCCCGCTACAAACTCCCGC GCACGCCATGCCCGTCCCCTTCGCGATCGTGCCCTGTCGTAACTTTATCT GGGTGTGTGTTCTATCGTTGTTTCCCCGCGCCATTTCTATTAGCGCTGAC CTATGCGGGACTAATGACCGCCGGACCCTTCTTCGTTTCGCGGGAGGACG TCGGCTTTGCTCACCCCGCGGTAGTCCTAAACGTGGACAAGATGGCGTGC TATATCGCGGAGAAGGTTGGCCGTAGCTCAAAGCAGCGCTCAAAACAGCA TTGTAAGAGGGGCATGCCGAATTTTTTCGTGAAGTTTAGATCTcCCCCCC CCCCTCTCTCCTTCTCGGGCGTGGAAATTTCTCAAGGGAGGGATTCTGGT TGTGCGGGGCGCAGTATTTAACTGCTTTCCCATGCGTCGAAGCCCCCCCC GCCCCGAGATTTATACACGTACTATACTAAGTACAAGTATCTTGAACCCT CCGCTCTCGCATCGTCTCACACCCTTCGTCTTCCGGTGCTCTGCGTGTGT CTTACCGAACCAAAAATCGGAAATCGCACCCTCAAAAAATACAACAAGTA CAGATATTAGATATTGATATCGACGTGTGGAGACGACGCGGGGGGGATTT AACGGCCGGGGCGGGGACGGTTGGGAACCGCAAGCCGGGAGTGGGGATCG AGGAGATCAACTTTTCCCAGAACGAGGATAGCGCGTCCCATGTCGCCGCT CTGCGGGTGCAAGTGAGTCAAGCGCTTCCAGCTCTGTTGGTCCGGCCGCT TGCTTTTCTTATAGTTCTAGTTCCCTGGCGGCTGGATGGATTACATGCGG AGTACACAGTATTATGTCGCTCTGTTTCCCTCCCCCCCCACAAGGTGTAA TATCCTCCAGTTCTGAATCTGCCATCGCTACGCGGGATTGTGACCCCGGG CGATAGAGCGCGGCGAAGAATGACGCCCTCGGCTGCGACGCGCACCCCCG CCGGGGTCGATTGTAAATCACTCGCGCGCTCGAACATGTCAGCGCATCGC ATTCCGTACGCAGTACAACTTTGCGAAGCGTCGAGATATCAGATCTTTTT CAAAGGGTTGAAATACTTCCGTGAACGGGGCAGACAGACTCGTACACGAA TCCTTCATAAAAGGTAGGTGGGGTATTTTAGTTTTGCAAGGGTCGCGGTC AGCTATCGCAGACTTGATCGGGACATTGAAAATATAGTGGTGGCTCGTAG GGAGAGGGGTAGTTGAGAGGAGCAAGGGCATGACATCGTGTGAGCATTCC TCGCACTATCACCTTCCTCCTACCGCGTCACATCAGGATATGACGCTTGC CGCGGCTAGAGTAGCGCTCCGAAAGATCAGAACTGATCTATGTTCATCTC TGGGCGTCGAGGGGAGCGGTGGCAAGGGTAATAAGGGCGACGCGCATTTG GAGGCGAGCTTGGTGATTTTATCCTCGGCAACGGCAAGCGCCTTACATCT CAGCGAACTCCTGCTCCCTGTTCGGGTGCGCCCTCTCCGTCAGCATCTCG GAAAAGCCAAGATAGGGACTGTTGGTCGTAACTTTAGCGATCGATCAGAT TAGGCTAAATAACGCACAGCGAAACCGGGAGCGATATTTTGCGTGTGTGT TTTTGCGGCCTTTTCCGCCGGTCCGTTGGTACTAGGTAGCTTCGTTTCCT ACATTATGTTTGTAGAACCCAGATACAGTACTAATTCATATCCCGCCACC ACGACACGTGTTGATGTTCACGCGGCATACCTGAAGAACGTGTTCCCTCT TTCCTGTAGATATACAAACACAATACCCTTTGCGCCGCGCAGGCAATGGA AACCCTGCTGACCATCGATTTCGCTGAGCCGGTACGCACGGACGCATCGC AAGCAGAGAGGATATCGAACGACTCCGGAATCGCAAGCGCTCTCGGGTTG CTGGAGGGCTCCTCCTTGCCTCTCGTCGTTCACGACGAGGCCCTCCACGC TTGGCTCGTGCAGCAAAACGACCGACGAATCGAGGACTAAGAGGCTTTGC TGTCGCTCTCTGGTTATATTGAGCACACTGTTGCTGAACTCGTGACGCGA CCGCCATCAACGCTCGGGTTTTGTCGGCGTGTGAAGGCGTTTGCCGTCAG TGCCAACTGGCCTCGCTCGCTTCCCCTCGCCCTCCTTTGGTATTTCTTAA ACGAATGATAAGTTTCGAGCGCGAGGTAGATTTGACGATAGTCGCGGTTC CCTCCGCGCAGAAGTATCTACCACGTGCTCAATCGAAGTCTGTGCTTAGT CCGCCTGGAGAGGTATCGCAGCTACGAAACCGGTTCTCTAGGGAGGAACT TGCTCGTGCTAGGGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig632:48787..56401+

>mRNA_F-serratus_M_contig632.17180.1 ID=mRNA_F-serratus_M_contig632.17180.1|Name=mRNA_F-serratus_M_contig632.17180.1|organism=Fucus serratus male|type=CDS|length=2544bp|location=Sequence derived from alignment at F-serratus_M_contig632:48787..56401+ (Fucus serratus male)
ATGAAAACAGTCCAGGTGCAACTGCCATCCAAGCCCTGGTGTGTGTCGCC
CAACTTGTCGGGTGTTACGATGAACTCAAGAGGGTCAAGAGTTCGATCGT
TGGCTGCGAGATGAAAACAGTCCAGGTGCAACTGCCATCCAAGCCCTGGT
GTGTGTCGCCCAACTTGTCGGGTGTTACGATGAACTCAAGAGGGTCAAGA
GTTCGATCGTTGGCTGCGAGACAGGAACAGGTGGGTGCCGAGTCCAACAA
GCGAGCGTGGCGACGCGAAATAAAGAAGGACGCCGAGGACGTTTCCAGGG
CGGGACTACGGAAGCTGCGGCAGCAGTTCGACGAAGGTGCTTCGGTGGGG
GAAATGATCGCAACCTTCGTGCACGACGTGATCGTTGATAACCAGGAGCT
CTTGACGACCGAGACAGGAACAGGTGGGTGCCGAGTCCAACAAGCGAGCG
TGGCGACGCGAAATAAAGAAGGACGCCGAGGACGTTTCCAGGGCGGGACT
ACGGAAGCTGCGGCAGCAGTTCGACGAAGGTGCTTCGGTGGGGGAAATGA
TCGCAACCTTCGTGCACGACGTGATCGTTGATAACCAGGAGCTCTTGACG
ACCGAGGCAAGCGTCATCATCCAGGCTTGCCCGCGTTTAGCGGAGGCAGC
CGAGGCGGGAGAACTTTCCGCGGCGCTGTCGTCCTCGGCACGCTCGAACG
CCGGAAGCGAATTCCTGCTGCAAACCCTGGACGCAGAAGTCGTCGCCGAG
CTGCGTACGCCTTGGGCTGCTGCGGTGAAGAAATGGAGGCAAGCGTCATC
ATCCAGGCTTGCCCGCGTTTAGCGGAGGCAGCCGAGGCGGGAGAACTTTC
CGCGGCGCTGTCGTCCTCGGCACGCTCGAACGCCGGAAGCGAATTCCTGC
TGCAAACCCTGGACGCAGAAGTCGTCGCCGAGCTGCGTACGCCTTGGGCT
GCTGCGGTGAAGAAATGGAGGCAGAAAGCCTTGGCGGTGGAGAAGTACCG
GAGCACGAATCCGACGGCCAACGCTGTCGTCTACACCTACATGACTAACT
GCTGCCTCAGGCAGGGCATGTGGGAGGTGGCATACGACGGCAGAAAGCCT
TGGCGGTGGAGAAGTACCGGAGCACGAATCCGACGGCCAACGCTGTCGTC
TACACCTACATGACTAACTGCTGCCTCAGGCAGGGCATGTGGGAGGTGGC
ATACGACGCGCTGACCTATGCGGGACTAATGACCGCCGGACCCTTCTTCG
TTTCGCGGGAGGACGTCGGCTTTGCTCACCCCGCGGTAGTCCTAAACGTG
GACAAGATGGCGTGCTATATCGCGGAGAAGCGCTGACCTATGCGGGACTA
ATGACCGCCGGACCCTTCTTCGTTTCGCGGGAGGACGTCGGCTTTGCTCA
CCCCGCGGTAGTCCTAAACGTGGACAAGATGGCGTGCTATATCGCGGAGA
AGATATTAGATATTGATATCGACGTGTGGAGACGACGCGGGGGGGATTTA
ACGGCCGGGGCGGGGACGGTTGGGAACCGCAAGCCGGGAGTGGGGATCGA
GGAGATCAACTTTTCCCAGAACGAGGATAGCGCGTCCCATGTCGCCGCTC
TGCGGGTGCAAATATTAGATATTGATATCGACGTGTGGAGACGACGCGGG
GGGGATTTAACGGCCGGGGCGGGGACGGTTGGGAACCGCAAGCCGGGAGT
GGGGATCGAGGAGATCAACTTTTCCCAGAACGAGGATAGCGCGTCCCATG
TCGCCGCTCTGCGGGTGCAAGATATGACGCTTGCCGCGGCTAGAGTAGCG
CTCCGAAAGATCAGAACTGATCTATGTTCATCTCTGGGCGTCGAGGGGAG
CGGTGGCAAGGGTAATAAGGGCGACGCGCATTTGGAGGCGAGCTTGGTGA
TTTTATCCTCGGCAACGGCAAGCGCCTTACATCTCAGCGAACTCCTGCTC
CCTGTTCGGGATATGACGCTTGCCGCGGCTAGAGTAGCGCTCCGAAAGAT
CAGAACTGATCTATGTTCATCTCTGGGCGTCGAGGGGAGCGGTGGCAAGG
GTAATAAGGGCGACGCGCATTTGGAGGCGAGCTTGGTGATTTTATCCTCG
GCAACGGCAAGCGCCTTACATCTCAGCGAACTCCTGCTCCCTGTTCGGGC
AATGGAAACCCTGCTGACCATCGATTTCGCTGAGCCGGTACGCACGGACG
CATCGCAAGCAGAGAGGATATCGAACGACTCCGGAATCGCAAGCGCTCTC
GGGTTGCTGGAGGGCTCCTCCTTGCCTCTCGTCGTTCACGACGAGGCCCT
CCACGCTTGGCTCGTGCAGCAAAACGACCGACGAATCGAGGACTAAGCAA
TGGAAACCCTGCTGACCATCGATTTCGCTGAGCCGGTACGCACGGACGCA
TCGCAAGCAGAGAGGATATCGAACGACTCCGGAATCGCAAGCGCTCTCGG
GTTGCTGGAGGGCTCCTCCTTGCCTCTCGTCGTTCACGACGAGGCCCTCC
ACGCTTGGCTCGTGCAGCAAAACGACCGACGAATCGAGGACTAA
back to top