mRNA_F-serratus_M_contig63.17150.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: D8LIR6_ECTSI (Myb-like DNA-binding domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIR6_ECTSI) HSP 1 Score: 149 bits (377), Expect = 1.340e-35 Identity = 89/241 (36.93%), Postives = 122/241 (50.62%), Query Frame = 1
Query: 325 GRWTISEQRHLCLVVRALM-------NPPQGAV----------------------------DGQETGVEEEVQDFPPLGRK--RQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQPDKYMEHCRYMHDRRMVEPRLNYNG-SVKEMNRTEITFDDYEL 933
G WT+ E+RHLCL VRALM PP G DG E P G + R GR+S+SS ++ +NW EVA LMS RS+ QCR KW +DPSVN + W EDA+L + + R G W +E DMA+WA+K G+LRR++ C+RR+ ++P+K+ +H RY+ DRR VEPRLN + +TE+T D++L
Sbjct: 508 GTWTLDEERHLCLAVRALMPRERRMGGPPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGEPRPSGXXXRAPETGTRGGHPRKNGRSSSSSN--SNTNMLDCFEGVNWQEVARLMSNGRSDKQCRLKWFEAIDPSVNRQREWDAEEDARLRKAVEARGMGEWRAVEMDMASWAQKRGVLRRTDHSCRRRYIAIEPEKHEKHLRYVQDRREVEPRLNAPCLAAHGFGKTEVTLKDFDL 746
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A7S3H8G2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8G2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.320e-13 Identity = 46/107 (42.99%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 67 IACLKRFQRTLNTKLYSRQRWSEEEDTRLKEATENLGCHEWLRVSRVVGNRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMNP 387
++CLKR+QRTLNTKL + WS EED LK A E+ G +WL VS + RS VQC NRW K P +D V G+W E+R L L A P
Sbjct: 1 MSCLKRYQRTLNTKLLNNDEWSSEEDLLLKAAVESCGKGKWLEVSLQIPGRSSVQCMNRWAK---------SPLCQDN-----IVSGKWVEEEERLLFLAAIAYNAP 93
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A2G5F6T9_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5F6T9_AQUCA) HSP 1 Score: 78.2 bits (191), Expect = 7.780e-12 Identity = 67/238 (28.15%), Postives = 105/238 (44.12%), Query Frame = 1
Query: 109 LYSRQRWSEEEDTRLKEATENLGCHEWLRVSRVVG-NRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRAL-MNPPQGAVDGQE--TGVEEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQP 810
L + WS ED L +N G + W+ ++ +G NR+P QC R+ + C + ++ WT + LC V A N Q E TGV+ + L R+R R +K V W ++A +S R++ QCRE+W++V+DPS+N Q W+E ED +L + E WSK+ +A R++ C+RR+K+L P
Sbjct: 140 LINHNSWSNTEDKELISIVQNSGIYNWIEIATTLGTNRTPFQCLARYQRSLN--C--------------HIMKQEWTAEDDAQLCEAVEACGENDWQQVASKLERRTGVQCSNRWMKTLNPARERVGRWTVEEDRHLKV--AVMLFKPKMWHKIAQFVS-GRTQVQCRERWVNVLDPSLNL-QEWTEEEDTKLKAAIVEHGH-CWSKVAASVAP---------RTDNQCRRRWKILLP 347
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A2G5F6G7_AQUCA (Uncharacterized protein (Fragment) n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5F6G7_AQUCA) HSP 1 Score: 78.2 bits (191), Expect = 9.210e-12 Identity = 67/238 (28.15%), Postives = 105/238 (44.12%), Query Frame = 1
Query: 109 LYSRQRWSEEEDTRLKEATENLGCHEWLRVSRVVG-NRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRAL-MNPPQGAVDGQE--TGVEEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQP 810
L + WS ED L +N G + W+ ++ +G NR+P QC R+ + C + ++ WT + LC V A N Q E TGV+ + L R+R R +K V W ++A +S R++ QCRE+W++V+DPS+N Q W+E ED +L + E WSK+ +A R++ C+RR+K+L P
Sbjct: 303 LINHNSWSNTEDKELISIVQNSGIYNWIEIATTLGTNRTPFQCLARYQRSLN--C--------------HIMKQEWTAEDDAQLCEAVEACGENDWQQVASKLERRTGVQCSNRWMKTLNPARERVGRWTVEEDRHLKV--AVMLFKPKMWHKIAQFVS-GRTQVQCRERWVNVLDPSLNL-QEWTEEEDTKLKAAIVEHGH-CWSKVAASVAP---------RTDNQCRRRWKILLP 510
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A7S5L7_NEMVE (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7S5L7_NEMVE) HSP 1 Score: 68.2 bits (165), Expect = 1.870e-8 Identity = 56/229 (24.45%), Postives = 107/229 (46.72%), Query Frame = 1
Query: 214 NRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMNPPQGAVDGQETGV--EEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQPDKYMEHCRYMHDRRMVEPRLNYNGSVKE 894
NR+P+QC+ R+ + K ++ +WT E R L +V+ V G G E+ + + + ++G A + +K +E + ++NW +++L+ R+ QCRE++++VV+PS+N W++ ED LL + G+WSKI +++ R++ C RR+ L+ Y+++ R+ R+ E N+ G K+
Sbjct: 467 NRTPIQCFQRYQRSLNKTL----------------LKSKWTPEEDRQLIELVKMFGEGNWQKVAGYMEGRMGEQVMHRYMKACKPTKKGKWTAEENECLLKA---IEEVKELNWERISELVP-GRTGTQCRERYVNVVNPSLNKGD-WTKEEDDILLAGVDRYGQGSWSKIAKELGT---------RTDNQCWRRWIQLRKSDYLDY-RFNTLRKKREMPRNFVGRKKD 664
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A7J6WSF6_THATH (Nicotinamide adenine dinucleotide transporter 2 protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WSF6_THATH) HSP 1 Score: 65.9 bits (159), Expect = 9.460e-8 Identity = 61/241 (25.31%), Postives = 102/241 (42.32%), Query Frame = 1
Query: 109 LYSRQRWSEEEDTRLKEATENLGCHEWLRVSRVVG-NRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMNPPQGAVDGQETGVEEEVQDFPPLGRKRQR--GPGRASASSRRVKTDGFVETIPDI----NWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQP 810
L + WS ED L + G + W ++ +G NR+P QC R+ + C + ++ WT + L V A G D Q+ + E + + R P R V+ D ++ + W ++A + R++ QCRE+W++V+DPS+N Q W+E ED +L + E WSK+ +A R++ C+RR+K+L P
Sbjct: 660 LINHNSWSNTEDKELISIVQKRGIYNWNEIATTLGTNRTPFQCLARYQRSLN--C--------------HIMKQEWTAEDDAQLREAVEAC-----GEYDWQQVASKLERRTGAQCFNRWMRTLNPVRERVGRWTVEEDRHLKVAVMLFKPKMWHKIAQFVP-GRTQVQCRERWVNVLDPSLNL-QEWTEEEDTKLKAAIVEHGH-CWSKVAASVAP---------RTDNQCRRRWKILLP 867
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: F0ZB64_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZB64_DICPU) HSP 1 Score: 64.3 bits (155), Expect = 2.450e-7 Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = 1
Query: 7 WVRIAARVSECEPRSRRRTPIACLKRFQRTLNTKLYSRQRWSEEEDTRLKEATE--NLGCH-EWLRVSRVVGNRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRA--------LMNPPQGAVDGQETGVEEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKW 609
W++IA + RTP++C++R+QR+LN+K+ ++ W+ EEDT L +A + + G +W V+ + R+ QC +RW K LDP GRW+ E + L V A + N G D Q V D P L + R A R+K F + W E++ LM NR+++QC +W
Sbjct: 434 WIQIAQELGT------ERTPLSCMQRYQRSLNSKMMKKE-WTIEEDTLLTKAVQLHSQGDKVDWQEVAEYIEGRTGHQCLHRWQKT-------LDPGIR---------RGRWSPDEDKLLVKAVEAYGKGSWILIKNHVPGRTDVQCRERYCNVLD-PQLDKNRW-----TPAEDERLKN--FTNEVGLGKWSEISKLMG-NRTDNQCWRRW 613
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A803MXY1_CHEQI (Uncharacterized protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MXY1_CHEQI) HSP 1 Score: 63.9 bits (154), Expect = 3.490e-7 Identity = 63/238 (26.47%), Postives = 105/238 (44.12%), Query Frame = 1
Query: 115 SRQRWSEEEDTRLKEATENLGCHEWLRVS-RVVGNRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMNPPQGAV----DGQETGVEEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQPD 813
+R W+ +ED L + G H W ++ ++ NR+P QC R+ + + D WT E L V + AV +G+ TG + + L RQR + + +R+K V +W +A + R++ QCRE+W++V+DPS+N Q W+E +D +L++ + E WSK+ + LR NQ C+RR+ L P+
Sbjct: 353 NRDNWTSDEDKHLLLLIQKNGIHNWSYIAEKLETNRTPFQCLARYQRSLNASILKRD----------------WTEDEDAQLRCAVESFGESNWQAVASVLEGR-TGTQCSNRWNKTLLPARQRVGTWSISEDKRLKV--AVTLFGHKSWHRIASFVP-GRTQAQCRERWVNVLDPSLNRGQ-WTEEDDMRLIKAIQEHGH-CWSKVAVCVP--------LRTDNQ-CRRRWMRLFPN 559
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A8H4BNQ7_MUCCL (Uncharacterized protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A8H4BNQ7_MUCCL) HSP 1 Score: 63.5 bits (153), Expect = 3.800e-7 Identity = 62/231 (26.84%), Postives = 105/231 (45.45%), Query Frame = 1
Query: 58 RTPIACLKRFQRTLNTKLYSRQRWSEEEDTRLKEATENLGCH--EWLRVSRVVG-NRSPVQCYNRWMKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMN---PPQGAVDGQETG---VEEEVQDFPPLGRKRQRGPGRASASSRRVKTDGFVETIPDINWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIE 723
R+PI CL ++ T +++ WS++E +L E E +G +W R++ +G NR+ QC++ +M +K R +WT E + L V+ N + G TG + + P+ KRQR A +R V+ NW ++ L+ R++ QCRE+W++++ PS+N Q E D QLLE++ P WS ++
Sbjct: 283 RSPIECLIQWT-TQEHPTINKKPWSKQESQKLAEIVEKIGLFSGQWERIANELGTNRTISQCFSHYMYEKNNTHAR---------------SLKWTKEEDKKLTDAVKLFGNCNWQQVANILGDRTGQQCLHRWQKSLNPV-IKRQRWNADEDALLQRA-----VQLYGAGNWTKIQRLIP-GRTDMQCRERWVNILQPSINRGQFTQEETD-QLLELVKTHGP-KWSFLQ 488
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Match: A0A7S3G4L6_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4L6_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 4.110e-6 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 544 NWLEVADLMSRNRSEHQCREKWIHVVDPSVNSSQLWSEAEDAQLLEVLGERKPGAWSKIEQDMANWAKKNGILRRSNQHCKRRFKVLQPDKYMEHC 831
NW +VA+ + + R++ QCRE++++V+DPS+N Q WS ED LL+++ G WS I Q M +G R++ C RR+K L P + +C
Sbjct: 210 NWAKVAEHV-QGRTDVQCRERFVNVLDPSLNR-QPWSSQEDDLLLQIIKRVGVGNWSVIAQQM------DGT--RTDNQCLRRWKELDPAAHSNYC 295 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig63.17150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig63.17150.1 >prot_F-serratus_M_contig63.17150.1 ID=prot_F-serratus_M_contig63.17150.1|Name=mRNA_F-serratus_M_contig63.17150.1|organism=Fucus serratus male|type=polypeptide|length=263bp MKKKRKPCTRLDPAQEDAEERFYPVEGRWTISEQRHLCLVVRALMNPPQGback to top mRNA from alignment at F-serratus_M_contig63:975178..978552- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig63.17150.1 ID=mRNA_F-serratus_M_contig63.17150.1|Name=mRNA_F-serratus_M_contig63.17150.1|organism=Fucus serratus male|type=mRNA|length=3375bp|location=Sequence derived from alignment at F-serratus_M_contig63:975178..978552- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig63:975178..978552- >mRNA_F-serratus_M_contig63.17150.1 ID=mRNA_F-serratus_M_contig63.17150.1|Name=mRNA_F-serratus_M_contig63.17150.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig63:975178..978552- (Fucus serratus male)back to top |