mRNA_F-serratus_M_contig6295.17137.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI) HSP 1 Score: 324 bits (831), Expect = 3.240e-108 Identity = 160/275 (58.18%), Postives = 200/275 (72.73%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKI-SKSSQMKPLTECLDFYLEKR-RKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK---VTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESK-VENRDINDHTSDTITYWACATREILYRIVNRLDLETG 807
+VA+C+R+KDF RFLPEWIAFHYALGVDE+ ++DDDS D T + L+PF++AG+V+Y E I + +QMKPL CL+ LE+R R D A W+LFHDTDEYL+P DT+L I +AL H+ TCC V RVQYGS E PRGL+LENFL H+ P N + KVMVNLDP+EPE GVV+P L SMHNA GC+C K V+++RINHYLGS+GD+ D + RYWE K +K V RDIN++ SD I +WACATRE+L+RIV LDLE G
Sbjct: 2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGG 276
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE) HSP 1 Score: 328 bits (841), Expect = 6.650e-107 Identity = 161/275 (58.55%), Postives = 201/275 (73.09%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKI-SKSSQMKPLTECLDFYLEKR-RKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK---VTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESK-VENRDINDHTSDTITYWACATREILYRIVNRLDLETG 807
+VA+C+R+KDF RFLPEWIAFHYALGVDE+ ++DDDS D T + L PF++AG+V+Y E I + +QMKPL CL+ +LE+R R D A W+LFHDTDEYL+P DT+L I +AL H+ TCC V RVQYGS E PRGL+LENFL H+ P N +PKVMVNLDP+EPE GVV+P L SMHNA GC+C K V+ +RINHYLGS+GD+ D + RYWE + +K V +RDIND+ SD I +WACATRE+L+RIV LDLE G
Sbjct: 214 RVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKG 488
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.760e-97 Identity = 145/271 (53.51%), Postives = 190/271 (70.11%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISK-SSQMKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGL 810
+VA CVR+KDFGRFLPEWIA+HYA+GVDE+ ++DDDS D TV+ L PF+ AG+V Y LE+ +QM PL CL+ ++ +R D APRW+LFHDTDEY+ PVDT++TI +AL H++TCCV+V RV YG+G E P+GL+LE FL HA + ++NR+PKV VNLD T+P G +L SMHN GC+C+ V E+RINHYLGS GD+ ++RYW+ + E + RDIN SDTIT WACATRE+L ++ DL L
Sbjct: 137 KVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVL 407
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI) HSP 1 Score: 299 bits (765), Expect = 2.790e-96 Identity = 142/273 (52.01%), Postives = 195/273 (71.43%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISK-SSQMKPLTECLDFYLEKRRKDPR-APRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYLGSLGDFYDHSRRYWEIYLK-KRPTESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGL 810
+VA+C+R+KD+GRFLPEW+AFHYA+GVDEV ++DD+SVD+T + L PF+ AG+V+Y + I + ++QM+PL CL Y+ +++ DP AP W+LFHD DEY++P DT++T+ +AL H STCC V R+QYGSG E PRGLV+++F+ H + + AN PKV+VNL PTE + V P L SMH A GC C K E+ INHYLGS GD+ + RYW Y+ ++ RD+ND SDTIT+W+C+TRE+LYR+ N LDL+TGL
Sbjct: 175 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHAN--PKVVVNLTPTESDP--VAPPLKSMHKAEGCACLDLKQ-EVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGL 442
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.740e-44 Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQA----LFPFMQAGVVKYKLEKISK--------SSQMKPLTECLDFYLEKRRKDPR-APRWILFHDTDEYLFPVDTN-LTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNL 501
QV C R+KD GR+LPEW+A+H+A+GVDE+ +FDDDSVD T +A L PF++AG+VK++ I S+ M PLTEC++ Y R APRW++ DTDEYL+ + + +PEAL + ++TCC+QV VQ+G+ ++PRGL+LENFLTHADP + N PKV+ L
Sbjct: 250 QVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVLYCL 430
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D8LG83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG83_ECTSI) HSP 1 Score: 117 bits (294), Expect = 3.580e-26 Identity = 73/222 (32.88%), Postives = 107/222 (48.20%), Query Frame = 1
Query: 250 DPRAPRWILFHDTDEYLFPVDTN-LTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNL----DPTEPEKGVVDPKLPSMHNA--------------HGCECEKPKVTEMRINHYLGSLGDFYDHSRRY-----WEIYLKKRPT-------ESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGLDKTS 822
D APRW++ DTDE+L+ + + +PEAL S ++TCC+QV VQ+G+ ++PRGL+LENFLTHADP + N PKV++ T E D P ++ GC CE+ V + + Y + D RRY W+ ++R + +E +NDH SD + W+C R +L R N L TG + S
Sbjct: 6 DRLAPRWVVLLDTDEFLWAREAGEIGLPEALESRSTTCCLQVSTVQHGTSGFPKSPRGLLLENFLTHADPTSPELNGPPKVILRFRDDASGTASESSGEDVNPPVSVSSFLGDGDGGGVTEMREGCRCEEAGVGDFAVRRYPMTREDVAARGRRYSTVLQWQQQQQRRAMTREAVEFDESLETAALNDHKSDAMVEWSCVVRRLLDRAANGKHLVTGRPQAS 227
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D8LG84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG84_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 8.330e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRT 123
QV C R+KD GR+LPEW+A+H+A+GVDE+ +FDDDSVD T
Sbjct: 64 QVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDT 104
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: UPI0018C63F15 (glycosyltransferase family 2 protein n=3 Tax=Cupidesulfovibrio TaxID=2802295 RepID=UPI0018C63F15) HSP 1 Score: 65.9 bits (159), Expect = 1.320e-8 Identity = 71/269 (26.39%), Postives = 112/269 (41.64%), Query Frame = 1
Query: 7 AMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVK-YKLEKISKSSQMKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLF---PVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENF---LTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK-VTE---------MRINHYLGSLGDFYDHSRRYWEIYLKKRPTESKVENRDINDHTSDTITYWACATR 762
A+C KD LPE++A+H+A+G ++ +D++S + L ++ G+V Y++ + KS QM T+C+ Y K RWI F D DE+L D L + E + + + V V +GS + P GLVL+++ T +P N I + P E DP HGC E VT +++NHYL Y+ R + +N + +D +W ATR
Sbjct: 8 AICAIVKDEHLSLPEFVAYHHAIGFEKFIFYDNESTIPVRETLQEYVTRGIVDVYRV--VGKSMQMPCYTQCIQDYRGK-------VRWIAFIDADEFLILKHHADARLLLFE----YEAHAGLAVHWVTHGSAGHLGRPGGLVLDDYPEYFTDNEPDNLHVKSI------VQPARTECAR-DPHQFFFAPGHGCVDEHGSPVTSAFAPFTADIVQLNHYLFKSQQDYEAKMR-----------RGRADNHEFSD-LRKLEGFWRQATR 244
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A2T4WK05_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WK05_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 1.470e-6 Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISKSSQMKPLTECLDFYLEKRRKDPRAPR-------WILFHDTDEYLFPV 309
++A+ K+ FL EW+ FH+A GVD ++L +D+S D L P+ Q G+++++ S P DFY+ + +A R WI F D+DEY+FP+
Sbjct: 40 KLALHAMFKNEADFLKEWLDFHFAHGVDFIRLTNDNSDDNFAAVLEPYRQMGILEWE------DSIAHP-----DFYVREEFHKNKALRDLGKDYQWIAFIDSDEYIFPL 138
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A376Y598_ECOLX (Glycosyltransferase family 2 protein n=10 Tax=Enterobacterales TaxID=91347 RepID=A0A376Y598_ECOLX) HSP 1 Score: 58.9 bits (141), Expect = 2.690e-6 Identity = 60/214 (28.04%), Postives = 98/214 (45.79%), Query Frame = 1
Query: 40 FLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISKSSQ--MKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLFPVD----TNLTIP----EALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHA---DPWNARANRIPKV--MVNLDPT------EPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYL 618
F+ EWIA+H ALG++++ + D+ S D + + L+ +A ++K +I +Q + P + L KD RW+ F D DE++ P D N +P +A+G+ + V YGS + I GLV+E F+ A P N I +V ++ PT +K V P H+ G E + +R+NHY+
Sbjct: 14 FIVEWIAYHMALGINDIYIADNISSDGSSELLYFLDKANIIK----RIDYPTQDGIPPQLGAYNKILSMLDKD----RWVAFIDADEFISPNDYEDGLNKLMPLLNDQAIGAISLNWAV------YGSSHSILPDDGLVIERFVKRAADLHPVNRHYKSIVRVSDVIKAGPTPHAFIINSDKKFVMPSGEEHHSYDGIS-EVIDWSVIRLNHYV 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6295.17137.1 >prot_F-serratus_M_contig6295.17137.1 ID=prot_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=polypeptide|length=273bp MCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVback to top mRNA from alignment at F-serratus_M_contig6295:14393..16476+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6295.17137.1 ID=mRNA_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=mRNA|length=2084bp|location=Sequence derived from alignment at F-serratus_M_contig6295:14393..16476+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6295:14393..16476+ >mRNA_F-serratus_M_contig6295.17137.1 ID=mRNA_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig6295:14393..16476+ (Fucus serratus male)back to top |