mRNA_F-serratus_M_contig6282.17130.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6282.17130.1
Unique NamemRNA_F-serratus_M_contig6282.17130.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 2.530e-86
Identity = 164/341 (48.09%), Postives = 213/341 (62.46%), Query Frame = 1
Query:    1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSS---NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDE--------NVKTPTKSAGTEKDHAISAKFARIGLFTKV-DTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
            E+ E+YSL+KPV +LI   Q T VPTGQAA+LGLA LKL+T N D  LD++TP R   +   E  G  E + TS PR H  LT+ G+  RE +  A+  R++D+ Y S      +D VFDMQM LHPTTA+L YVD+L   +  AA +K+ IT +++A AV+L    +     +G  +D+SV+          +++T    A  +KD A +AKFA +GLF K       + QP+      AEL+ L+ V AGTLT  LSC  +L+WWK+WGR +PLLAR ARVVF  PASAAVLERDF+DA  M  SS    D  YVEMVLFLHGN DLIP  IPEL  ++
Sbjct:  288 EIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRA--QGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQ-AGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDED 625          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 2.650e-71
Identity = 150/335 (44.78%), Postives = 198/335 (59.10%), Query Frame = 1
Query:    1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDH--VFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-----QRVAVAGGSGSGRAR--DDSVSDENVKTPTKSAGTEKDHAISAKFARIGLF-TKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPEL 975
            E+ E+YSL++PV ++I   Q T  PTGQAA+LGLAALKL+TLNAD PLDI+TP  K  +  TE  G E+ R T+  R H++LT  G+  RE +  A+ WR +DKRY S        VFDMQM LHP TA+L YV RLA  +  AA +K+ IT +++A A +L     +R  +    G   A+    + +  N      SA   K+   +A  A +GL  T+ + +S +P      +  AEL+ L++ +   L    SC  +L WWK+    +PLLAR+ARVVFA PAS  V ERD   AGRM  SS    D  YVEMVLFLHGN DL+P  IPEL
Sbjct:  396 EIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQ-RTTA--RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASP----IERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPEL 723          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 3.150e-62
Identity = 132/326 (40.49%), Postives = 173/326 (53.07%), Query Frame = 1
Query:    1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
            E+ E+YS++KP   +I + Q T+VPTGQ A+L LAALKL TLN D PL+I+TP RK  +  T  IG  E   TS PR+H   T   K  R+ +  ++ W W+DKRY S    D  + +     P T       RL        ++         A     +R   A   GS            V    K+   +++ A +  +A +GLF           PS      AEL  L+AV  G+L   LSC  +LKWWK W   +PLLAR+ARVVF  PASAAVLERDFS+AGRM  SS    D+ YVEM++FLHGN DLIP +I +L+
Sbjct:  375 EIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDY-VSTCRWPCTR-----PRLTCAALHTGDVSTTPAGSAAADEPAAKRARQAAAPGS------------VHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLT 682          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.660e-58
Identity = 120/257 (46.69%), Postives = 151/257 (58.75%), Query Frame = 1
Query:  217 TSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSS--NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-QRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
            TS PR+H  LT   +  R+ M  ++ WRW+DKRY S  +  +D+VFDMQMALHPTTA+L YVD+LA     A  +K  IT +V++ AV+L +  A+  G GS              TP  SA  +K  A  A+ A           S    PS      AEL KL+AV  G+L A L C  +LKWWK W   +PLLAR+ARVV    ASAAVLE DFS+AGRM  SS    D+ YVEM+LFLHGN DLIP +I +L+
Sbjct:  219 TSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGS-------------TTPAWSAAADKPAAKRARQAAA-------PGSKEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLT 455          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.940e-53
Identity = 111/238 (46.64%), Postives = 141/238 (59.24%), Query Frame = 1
Query:  277 MVGAIKWRWYDKRYSS--NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-QRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTK-VDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
            M  ++ WR +DKRY S  +  +D+VFDMQMALHPTTA L YV++LA     A  +K  IT +V+   V+L +  A+  G GS                T  AG E   A +   A +GLF   VD  +  PQ S      AEL KL+AV  G L A L C  +LKWWK W   +PLLAR+ARVVF  PASAAVLE  FS+AGRM+ SS    D+ YVEM++FLHGN +LIP +I +L+
Sbjct:    1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGDGS----------------TTPAGEE---ATTNMHASLGLFGPGVDGQNEEPQ-SFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLT 218          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 4.720e-53
Identity = 127/338 (37.57%), Postives = 175/338 (51.78%), Query Frame = 1
Query:    1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDEN--VKTPTKS------AGTEKDHAISAKFARIGLFTKVDT-SSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
            ++ E+YS++KPV +LI  +Q T VPTGQAA LGLAALKL+T N D  LD++TP R   +   E  G  E + TS PR +                        K   S   +D VFDMQM LHPTTA+L YVD+LA +   AA + ++IT +++  AV+L    +     +G  + +SV+ +      P  S      A  + + A +AKF  + LF K    ++ + QP+      AE + L+ V AG+LT  L C  +LKWW++W   +PLLAR ARV F  PA+                      D  YVEMVLFLHG  DL P  IPEL  ++
Sbjct:  114 DIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPARAQGR--PEGAGGVEPKATSVPRCY------------------------KPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQ-AGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDED 403          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.140e-32
Identity = 107/339 (31.56%), Postives = 168/339 (49.56%), Query Frame = 1
Query:    4 VSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNAL----SDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPT---KSAG--TEKDHAISAKFARIGLF--TKVDTSSPT-PQPSVASQV-HAELDKLKAVNAGTLTACLSCSAILKWWKQWGRD-FPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
            + E+YSL+KP+  ++ E Q   +PTG +    L  L+  TL+  +PL++  P RK       R     L  T+  R  + L +     R  +  A+  R++ KRY +N +    SD+VF+M   + P    L ++  +  +D  A  + + I  +VV   V+L   A   G+  G+A +   S  +   P    +S G  T      + +  + G+F  +K  TS    P      +V   E D+  A  A T  +      +L++W   G+  +P +AR ARV+ +VPAS+AVLERDFS AGR+   +      AYVEMVLFL+GN + IP  +P+LS
Sbjct:  458 IEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVP-RKVTTTDWART----LATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKL---AEGAGAYPGKATEGDTSGASASAPPPFKRSRGPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLS 788          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.100e-27
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 1
Query:  736 LSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIP 969
            LSC ++LKWWK+W   +PLLAR ARVVF  PASAAVLE DF DAGR+  SS    D  YVEM+LFLHGN DLIP +IP
Sbjct:   32 LSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A2V3IDA5_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA5_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 7.430e-25
Identity = 94/328 (28.66%), Postives = 167/328 (50.91%), Query Frame = 1
Query:   10 EIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKA-DKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLF-TKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
            E++SL+ PV +++ + Q TT P      L L  L    LN++EPL+I  P R+  +    + + R+ L + +       LT+  ++L   +  A++ R+Y K Y+    S  + +MQ+ +H     L  +  + L    A + + +I  ++V   ++ ++ A  GG   G  R     D+++   ++     K+      F       T V+ S  T + SV +++++ LD  +A+  G +T+      +L WW+  G  +P L+ +AR V   P S+A ++RDF  AG    S    +D+A+V+M+LFLH N DLIPS++PE+S  E
Sbjct:   15 ELFSLMLPVSEIMKQAQLTTFPARIDGFLALCRLNRHLLNSEEPLEIYDPSREDYEAPNRQPMTRDPLHLCN-------LTKHTRVL---LSNALQKRFY-KSYNGTPRSS-MLEMQVFMHLVHRKLNCLGYI-LEPFDAEKHRNRIMDEIVDLCIKCEQ-AQNGGVEEGE-RQSIHGDKSIVLESQGVDKTKNFNNLWDFEEFACDDTPVEESLSTAEESVRAEINSYLDHERAL-PGDVTS----RNLLNWWRTKGSKYPSLSVVARAVLGHPVSSARIDRDFGTAGSFLSSRRTRHDSAFVDMLLFLHCNLDLIPSDVPEMSNPE 322          
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.150e-20
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 1
Query:  769 QWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNND-TAYVEMVLFLHGNSDLIPSNIPELS 978
             W   +PLLAR+ARVVF  PASAAVLERDFS+AGRM  SS R  D T YVEM+LFLHGN DLIP +I +L+
Sbjct:    1 MWAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLT 71          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBK4_ECTSI2.530e-8648.09Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI2.650e-7144.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE3.150e-6240.49Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE1.660e-5846.69Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JML0_9PHAE1.940e-5346.64Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEK6_9PHAE4.720e-5337.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVU5_9PHAE1.140e-3231.56Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE5.100e-2766.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A2V3IDA5_9FLOR7.430e-2528.66Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gr... [more]
A0A6H5KCJ3_9PHAE2.150e-2067.61Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6282contigF-serratus_M_contig6282:21694..22716 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score62.4
Seed ortholog evalue4.6e-07
Seed eggNOG ortholog7029.ACYPI085170-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hAT family C-terminal dimerisation region
EggNOG OGs3A4I2@33154,3BRWZ@33208,3D90A@33213,423WH@6656,KOG1121@1,KOG1121@2759
COG Functional cat.L
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons2
Model size987
Cds size987
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931942.2395499-CDS-F-serratus_M_contig6282:21693..222071622931942.2395499-CDS-F-serratus_M_contig6282:21693..22207Fucus serratus maleCDSF-serratus_M_contig6282 21694..22207 +
1690964068.3626823-CDS-F-serratus_M_contig6282:21693..222071690964068.3626823-CDS-F-serratus_M_contig6282:21693..22207Fucus serratus maleCDSF-serratus_M_contig6282 21694..22207 +
1622931942.257447-CDS-F-serratus_M_contig6282:22243..227161622931942.257447-CDS-F-serratus_M_contig6282:22243..22716Fucus serratus maleCDSF-serratus_M_contig6282 22244..22716 +
1690964068.375003-CDS-F-serratus_M_contig6282:22243..227161690964068.375003-CDS-F-serratus_M_contig6282:22243..22716Fucus serratus maleCDSF-serratus_M_contig6282 22244..22716 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6282.17130.1prot_F-serratus_M_contig6282.17130.1Fucus serratus malepolypeptideF-serratus_M_contig6282 21694..22716 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6282.17130.1

>prot_F-serratus_M_contig6282.17130.1 ID=prot_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=polypeptide|length=329bp
EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDI
ITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWR
WYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKIT
SQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAIS
AKFARIGLFTKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSA
ILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNN
DTAYVEMVLFLHGNSDLIPSNIPELSGKE
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mRNA from alignment at F-serratus_M_contig6282:21694..22716+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6282.17130.1 ID=mRNA_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=mRNA|length=1023bp|location=Sequence derived from alignment at F-serratus_M_contig6282:21694..22716+ (Fucus serratus male)
GAGGTGTCCGAGATCTACTCCCTTGTCAAGCCGGTCGGAGATCTCATCAC GGAGTTCCAGAACACGACTGTCCCGACGGGGCAAGCAGCCCTTCTCGGCC TCGCGGCGCTGAAGCTCACCACTCTTAACGCCGACGAGCCACTCGATATC ATCACCCCTGAACGTAAGGCGGATAAGAACGGGACAGAACGCATCGGCAG GGAAGAGCTGAGGATCACGAGCCAGCCCCGAAAGCATGAGGAGCTGACTG AAGCAGGCAAACTATTGCGCGAGAAAATGGTGGGGGCCATCAAATGGCGT TGGTATGACAAGCGATACTCCTCCAATGCCCTCTCAGACCACGTGTTTGA CATGCAGATGGCCCTTCACCCAACGACGGCTAACTTAGCCTACGTGGACA GGTTGGCACTGAACGACACCCTGGCGGCGGAGATCAAGGAGAAGATCACG AGCCAAGTCGTTGCCTTCGCCGTGCAACTTCAAAGGGTAGCGGTCGCCGG TGGTTCAGGGTCGGGTAAAACTCCAGCGAAACGGGCCCGTAACCAAAAAG GTCGCGCTAGAGACGACTCCGTGAGCGACGAGAATGTGAAGACGCCCACG AAGAGCGCTGGCACAGAGAAGGACCACGCGATCTCAGCCAAGTTTGCACG AATTGGGCTCTTCACGAAGGTGGATACCTCCAGCCCGACGCCGCAGCCGT CCGTGGCGAGTCAAGTCCACGCCGAGCTCGACAAGCTCAAAGCGGTAAAC GCTGGAACGCTCACGGCGTGCCTTAGCTGCAGCGCTATCCTCAAATGGTG GAAGCAGTGGGGTCGTGACTTCCCCCTGTTGGCTCGGATTGCCCGCGTGG TATTTGCCGTGCCAGCGTCGGCGGCGGTGTTAGAGCGCGATTTCAGCGAC GCCGGGCGTATGTCGATGTCCTCCGAGAGGAACAATGACACCGCCTACGT GGAGATGGTGCTCTTCTTGCACGGAAACTCTGACCTCATTCCCAGCAACA TCCCTGAGCTCTCAGGAAAGGAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig6282:21694..22716+

>mRNA_F-serratus_M_contig6282.17130.1 ID=mRNA_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=CDS|length=1974bp|location=Sequence derived from alignment at F-serratus_M_contig6282:21694..22716+ (Fucus serratus male)
GAGGTGTCCGAGATCTACTCCCTTGTCAAGCCGGTCGGAGATCTCATCAC
GGAGTTCCAGAACACGACTGTCCCGACGGGGCAAGCAGCCCTTCTCGGCC
TCGCGGCGCTGAAGCTCACCACTCTTAACGCCGACGAGCCACTCGATATC
ATCACCCCTGAACGTAAGGCGGATAAGAACGGGACAGAACGCATCGGCAG
GGAAGAGCTGAGGATCACGAGCCAGCCCCGAAAGCATGAGGAGCTGACTG
AAGCAGGCAAACTATTGCGCGAGAAAATGGTGGGGGCCATCAAATGGCGT
TGGTATGACAAGCGATACTCCTCCAATGCCCTCTCAGACCACGTGTTTGA
CATGCAGATGGCCCTTCACCCAACGACGGCTAACTTAGCCTACGTGGACA
GGTTGGCACTGAACGACACCCTGGCGGCGGAGATCAAGGAGAAGATCACG
AGCCAAGTCGTTGCCTTCGCCGTGCAACTTCAAAGGGTAGCGGTCGCCGG
TGGTTCAGGGTCGGGAGGTGTCCGAGATCTACTCCCTTGTCAAGCCGGTC
GGAGATCTCATCACGGAGTTCCAGAACACGACTGTCCCGACGGGGCAAGC
AGCCCTTCTCGGCCTCGCGGCGCTGAAGCTCACCACTCTTAACGCCGACG
AGCCACTCGATATCATCACCCCTGAACGTAAGGCGGATAAGAACGGGACA
GAACGCATCGGCAGGGAAGAGCTGAGGATCACGAGCCAGCCCCGAAAGCA
TGAGGAGCTGACTGAAGCAGGCAAACTATTGCGCGAGAAAATGGTGGGGG
CCATCAAATGGCGTTGGTATGACAAGCGATACTCCTCCAATGCCCTCTCA
GACCACGTGTTTGACATGCAGATGGCCCTTCACCCAACGACGGCTAACTT
AGCCTACGTGGACAGGTTGGCACTGAACGACACCCTGGCGGCGGAGATCA
AGGAGAAGATCACGAGCCAAGTCGTTGCCTTCGCCGTGCAACTTCAAAGG
GTAGCGGTCGCCGGTGGTTCAGGGTCGGGTCGCGCTAGAGACGACTCCGT
GAGCGACGAGAATGTGAAGACGCCCACGAAGAGCGCTGGCACAGAGAAGG
ACCACGCGATCTCAGCCAAGTTTGCACGAATTGGGCTCTTCACGAAGGTG
GATACCTCCAGCCCGACGCCGCAGCCGTCCGTGGCGAGTCAAGTCCACGC
CGAGCTCGACAAGCTCAAAGCGGTAAACGCTGGAACGCTCACGGCGTGCC
TTAGCTGCAGCGCTATCCTCAAATGGTGGAAGCAGTGGGGTCGTGACTTC
CCCCTGTTGGCTCGGATTGCCCGCGTGGTATTTGCCGTGCCAGCGTCGGC
GGCGGTGTTAGAGCGCGATTTCAGCGACGCCGGGCGTATGTCGATGTCCT
CCGAGAGGAACAATGACACCGCCTACGTGGAGATGGTGCTCTTCTTGCAC
GGAAACTCTGACCTCATTCCCAGCAACATCCCTGAGCTCTCAGGAAAGGA
GGTCGCGCTAGAGACGACTCCGTGAGCGACGAGAATGTGAAGACGCCCAC
GAAGAGCGCTGGCACAGAGAAGGACCACGCGATCTCAGCCAAGTTTGCAC
GAATTGGGCTCTTCACGAAGGTGGATACCTCCAGCCCGACGCCGCAGCCG
TCCGTGGCGAGTCAAGTCCACGCCGAGCTCGACAAGCTCAAAGCGGTAAA
CGCTGGAACGCTCACGGCGTGCCTTAGCTGCAGCGCTATCCTCAAATGGT
GGAAGCAGTGGGGTCGTGACTTCCCCCTGTTGGCTCGGATTGCCCGCGTG
GTATTTGCCGTGCCAGCGTCGGCGGCGGTGTTAGAGCGCGATTTCAGCGA
CGCCGGGCGTATGTCGATGTCCTCCGAGAGGAACAATGACACCGCCTACG
TGGAGATGGTGCTCTTCTTGCACGGAAACTCTGACCTCATTCCCAGCAAC
ATCCCTGAGCTCTCAGGAAAGGAG
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