mRNA_F-serratus_M_contig6244.17094.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6244.17094.1
Unique NamemRNA_F-serratus_M_contig6244.17094.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: D7FVE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE8_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 6.000e-82
Identity = 128/170 (75.29%), Postives = 141/170 (82.94%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REAIQIMGDLAV+YGFYGSEWD+ DP TY E  AGEAL VTDP EAWVFHIL D T+ SAIWAAQRVP DHV+VVANQFIIKE+ PD   + FMFS+NLFEVAE+GG GYKRGSG PLHF KAF  RP D PHF YSTRR+WRVLD FAPSLGLSP+TD+  + +PFS R
Sbjct:  189 REAIQIMGDLAVEYGFYGSEWDSSDPITYEE--AGEALTVTDPDEAWVFHILSDYTTKSAIWAAQRVPADHVSVVANQFIIKEVYPDPHPD-FMFSDNLFEVAEKGGCGYKRGSGFPLHFVKAFGTRPDDFPHFAYSTRRVWRVLDTFAPSLGLSPFTDTFGQGHPFSAR 355          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A835ZHN0_9STRA (Peptidase family C69-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN0_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.550e-62
Identity = 106/169 (62.72%), Postives = 127/169 (75.15%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSV 516
            REAIQIMGD+AV+ GFYGSEWD  D FTY E  AGE+L VTDP E W+FHI  DDT+TSA+W AQRVPD HV+VVANQFII+ + P+A  +  MFS NL++VA+R G  +    GM L FT+AF  RP D PH+ YSTRR+WRVLD+ APSL LSPY D++    PFSV
Sbjct:  166 REAIQIMGDMAVELGFYGSEWDPTDLFTYLE--AGESLTVTDPDEVWIFHISSDDTATSAVWVAQRVPDGHVSVVANQFIIRAVDPEASPDDMMFSANLWDVAQRAGL-WDPEQGM-LDFTEAFAVRPKDQPHYAYSTRRVWRVLDMAAPSLNLSPYVDTMGDGLPFSV 330          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A7S2UZI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZI8_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.840e-52
Identity = 93/170 (54.71%), Postives = 119/170 (70.00%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REAIQIMG+L+  YGF+GS WD  D   + E  AGEA  V DP EAW+FHI+PD T  SAIW A+RV D+ V VVAN F+I+++ PD D + +MFS+NLF  A+  G  +   S  P+ FT  F+ RP+D PH+ YSTRR+WRV  +  PSL LSPYT+ +A DYPFSV+
Sbjct:  172 REAIQIMGELSEMYGFFGSAWDGGDGM-FGE--AGEAFGVVDPTEAWMFHIMPDSTLKSAIWVAKRVADEEVAVVANNFVIRDVHPD-DPDNYMFSQNLFSEAQLAGC-WNPNSDQPVDFTYCFSARPNDIPHWSYSTRRVWRVFQLLKPSLKLSPYTNPIADDYPFSVK 336          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A8K1FPP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPP6_PYTOL)

HSP 1 Score: 182 bits (461), Expect = 7.810e-51
Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REAIQIMGDL VKYG+YG+EW+      Y E  AGEAL VTD  EAW+FHILPDDT  SAIWAAQRVPDDH++ VANQF+I E+  + +T++FM S N+ EVA R    +   SG    FT+ F++ P D  H  YSTRR+WRV  +  P L LSPYTD  +  YPFSV+
Sbjct:  178 REAIQIMGDLGVKYGYYGAEWEGDG--VYGE--AGEALTVTDTTEAWMFHILPDDTGKSAIWAAQRVPDDHISAVANQFVIHELELN-NTDFFMASPNIHEVAIRNNL-WSPDSGEAFDFTRIFSQ-PRDEGHQYYSTRRVWRVFTLADPGLDLSPYTDVYSSGYPFSVK 340          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A3F2S056_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S056_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.310e-50
Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REAIQIMGDLAV+YG+YG+EW+    F      AGEAL VTD +EAW+FHILPDDT  SA+WAAQRVPDD ++ VANQF+I+E+  +  +E F+ S N+ +VA R    +K   G P  FT+A+ +  +DT H  YSTRR+WR+  +  P L LSP TD LA DYPFSV+
Sbjct:  176 REAIQIMGDLAVQYGYYGAEWEGDGVFD----EAGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLNNPSE-FLASPNIHDVAIRNNI-WKPDEGTPFDFTRAYAQPRADT-HQYYSTRRIWRLFTLANPELKLSPETDVLASDYPFSVK 338          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: D0N6P9_PHYIT (Peptidase, putative n=18 Tax=Phytophthora TaxID=4783 RepID=D0N6P9_PHYIT)

HSP 1 Score: 179 bits (455), Expect = 4.490e-50
Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFS 513
            REA+Q+MGDLAV+YG+YG+EW+  D   Y E  AGEAL VTD +EAW+FHILPDDT  SAIWAAQRVPDD ++ VANQF+I+E+  D    YF+ S N+ +VA R    +K   G P  FT+A+ +   DT H  YSTRR+WR+  +  P L LSP TD LA DYPFS
Sbjct:  175 REAVQLMGDLAVQYGYYGAEWEGND--VYDE--AGEALTVTDTKEAWIFHILPDDTGRSAIWAAQRVPDDQMSGVANQFVIRELDLDRPA-YFLASPNVHDVAIRNNL-WKPDDGTPFDFTRAYAQPRKDT-HQYYSTRRVWRLFTLANPELKLSPETDVLASDYPFS 335          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A6A3S4M1_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S4M1_9STRA)

HSP 1 Score: 176 bits (447), Expect = 8.160e-49
Identity = 92/170 (54.12%), Postives = 120/170 (70.59%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REA+Q+MGDLAV+YG+YG+ W+  D   Y E  AGEAL VTD +EAW+FHILPDDT  SA+WAAQRVPDD ++ VANQF+I+E+     +E F+ S N+ +VA R    +K   G P  FT+A+ +   +T  F YSTRR+WR+  +  P+L LSP TD LA DYPFSV+
Sbjct:  176 REAVQLMGDLAVQYGYYGAVWEGRD--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLSRPSE-FLASPNVHDVAIRNNI-WKPDQGTPFDFTRAYAQPRKETHQF-YSTRRIWRLFTLANPALVLSPDTDVLASDYPFSVK 338          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A3M6VJV4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJV4_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.930e-48
Identity = 91/170 (53.53%), Postives = 119/170 (70.00%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REAIQ+MGDLAV+YG+YG+EW+      Y E  AGEAL VTD +EAW+FHILPDDT  SA+WAAQRVPDD ++ VANQF+I+E+  +   + F+ S N+ +VA R    +K  +G P  FT+A+  +P    H  YSTRR+WR+  +  P+L LSP TD LA DYPF V+
Sbjct:  172 REAIQLMGDLAVQYGYYGAEWEGGG--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLNRPAD-FLASPNVHDVAIRNNI-WKPNNGTPFDFTRAY-AQPRKPAHQYYSTRRIWRLFTLANPALALSPETDVLASDYPFGVK 334          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: H3GSB1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSB1_PHYRM)

HSP 1 Score: 172 bits (437), Expect = 2.150e-47
Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
            REA+Q+MGDLAV+YG+YG+ W+  D   Y E  AGEAL VTD +EAW+FHILPDDT  SAIWAAQRVPDD ++ VANQF+I+E+  +   + F+ S N+ +VA R    +K   G P  FT+A+  +P    H  YSTRR+WR+  +  P L LS  TD LA DYPFSV+
Sbjct:  176 REAVQLMGDLAVQYGYYGAVWEGAD--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAIWAAQRVPDDQISGVANQFVIRELDLNRPAD-FLASPNVHDVAIRNNI-WKPDQGTPFDFTRAY-AQPRKETHQYYSTRRIWRLFTLANPELKLSAETDVLASDYPFSVK 338          
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A5D6Y0Y6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.730e-47
Identity = 94/170 (55.29%), Postives = 112/170 (65.88%), Query Frame = 1
Query:   10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNR-RPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSV 516
            R AIQIMGDL V+YG+YG+EWD  D        AGEAL VTD  EAW+FHILPDDT  SA+W AQRVPDDHVT VANQF+I+ +      + FM S+NL  VA R G      S  P  FT+A+ + RP+   H  YSTRR+WRV  +  P+L L P TD+ A DYPFSV
Sbjct:  175 RAAIQIMGDLGVQYGYYGAEWDGNDALA----EAGEALTVTDTTEAWMFHILPDDTGASAVWVAQRVPDDHVTAVANQFVIRGVDLTRPDD-FMASDNLHAVALRQGLW--DNSSAPFDFTRAYAQPRPAGQQH--YSTRRVWRVFTLADPALPLPPTTDTFASDYPFSV 335          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVE8_ECTSI6.000e-8275.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHN0_9STRA2.550e-6262.72Peptidase family C69-domain-containing protein (Fr... [more]
A0A7S2UZI8_9STRA1.840e-5254.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1FPP6_PYTOL7.810e-5157.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2S056_9STRA4.310e-5055.29Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
D0N6P9_PHYIT4.490e-5056.55Peptidase, putative n=18 Tax=Phytophthora TaxID=47... [more]
A0A6A3S4M1_9STRA8.160e-4954.12Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3M6VJV4_9STRA1.930e-4853.53Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
H3GSB1_PHYRM2.150e-4753.53Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6Y0Y6_9STRA2.730e-4755.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6244contigF-serratus_M_contig6244:23445..25246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.9
Seed ortholog evalue6.4e-66
Seed eggNOG ortholog2880.D7FVE8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Peptidase family C69
EggNOG OGs2QR8T@2759,COG4690@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size522
Cds size495
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6244.17094.1prot_F-serratus_M_contig6244.17094.1Fucus serratus malepolypeptideF-serratus_M_contig6244 23445..25219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931934.9216282-CDS-F-serratus_M_contig6244:23444..235321622931934.9216282-CDS-F-serratus_M_contig6244:23444..23532Fucus serratus maleCDSF-serratus_M_contig6244 23445..23532 -
1690964064.6196332-CDS-F-serratus_M_contig6244:23444..235321690964064.6196332-CDS-F-serratus_M_contig6244:23444..23532Fucus serratus maleCDSF-serratus_M_contig6244 23445..23532 -
1622931934.9407077-CDS-F-serratus_M_contig6244:23795..239711622931934.9407077-CDS-F-serratus_M_contig6244:23795..23971Fucus serratus maleCDSF-serratus_M_contig6244 23796..23971 -
1690964064.6314662-CDS-F-serratus_M_contig6244:23795..239711690964064.6314662-CDS-F-serratus_M_contig6244:23795..23971Fucus serratus maleCDSF-serratus_M_contig6244 23796..23971 -
1622931934.9610207-CDS-F-serratus_M_contig6244:24368..245181622931934.9610207-CDS-F-serratus_M_contig6244:24368..24518Fucus serratus maleCDSF-serratus_M_contig6244 24369..24518 -
1690964064.6410754-CDS-F-serratus_M_contig6244:24368..245181690964064.6410754-CDS-F-serratus_M_contig6244:24368..24518Fucus serratus maleCDSF-serratus_M_contig6244 24369..24518 -
1622931934.9753118-CDS-F-serratus_M_contig6244:25138..252191622931934.9753118-CDS-F-serratus_M_contig6244:25138..25219Fucus serratus maleCDSF-serratus_M_contig6244 25139..25219 -
1690964064.651159-CDS-F-serratus_M_contig6244:25138..252191690964064.651159-CDS-F-serratus_M_contig6244:25138..25219Fucus serratus maleCDSF-serratus_M_contig6244 25139..25219 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931934.9931602-UTR-F-serratus_M_contig6244:25219..252461622931934.9931602-UTR-F-serratus_M_contig6244:25219..25246Fucus serratus maleUTRF-serratus_M_contig6244 25220..25246 -
1690964064.661865-UTR-F-serratus_M_contig6244:25219..252461690964064.661865-UTR-F-serratus_M_contig6244:25219..25246Fucus serratus maleUTRF-serratus_M_contig6244 25220..25246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6244.17094.1

>prot_F-serratus_M_contig6244.17094.1 ID=prot_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=polypeptide|length=165bp
MGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDT
STSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERG
GTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSP
YTDSLARDYPFSVR*
back to top

mRNA from alignment at F-serratus_M_contig6244:23445..25246-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6244.17094.1 ID=mRNA_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=mRNA|length=1802bp|location=Sequence derived from alignment at F-serratus_M_contig6244:23445..25246- (Fucus serratus male)
GCTCTACTTAGGGAGGCCATCCAAATCATGGGCGACCTCGCCGTGAAGTA CGGGTTCTACGGCAGTGAGTGGGACGCCATGGATCCCTTCACCTATACCG AGGTGCGTGTAATAGGGCAGGTGGTAGATGTTGGGATTGATGCTTTCAAG CTCTTGAGGACAGCGGGCGGTCTTGGCCGTTTACTATTTTTACCGATAGT GCTTTACCAGGTACTAAGTATATATTTAACAAAGCTGGCCCGCCCGAATG GTTACTGTCAGGTCTGTTGTTTCTTTTCATTCGCATGACTGCAGCAGGTG GTGTAGTCAAGTGTTTGAGGGCCAGATTATGTGCCCTGGACGTCTGGAGT GTTTTGGTCGGTACTGCCGAGTGCTCACAGTATTCATACTATTGATAGAA TGTCCATAGTGTTCATAGTCCGAATCTAGCCGTTGTGTAGCTCTTGGTAC TCTGAATAGAAGTAGGAGGGCAGGGAAGGTTGCGGGGTTCGTACGTGTTC ATACGTATAGGATTCAGGGCCGTATGCTGGCGCCGCGGAGGCTTGTTGGT CTATGCTCCGATGTACGTTAAGAGATTTGAAGTTTACGTTTCTTAGACAT ACTTGTGGCATAACTTTGGTGACATTAGCCCCAGGAATGACAAAAGAGCG GTGATAAGCTCAATACATTTGAGCTGAGTCCCCTACTGCCATGGCGGGCA AAACAATACAATCCACTCTGTTCAACAGGCGGGAGAGGCACTCATGGTGA CGGACCCCCAGGAGGCATGGGTTTTCCATATCCTTCCAGACGACACGTCG ACGAGCGCGATATGGGCGGCGCAGAGAGTGCCGGATGACCACGTCACCGT GGTTGCCAACCAATTCATTATAAAAGAGGTGTGCTTGTGATTCTCCTGCG GGGATCACACGCAAACGCGCGCATACATAAAAGCAGGCAACTAGAGAGGA CTAGAAAATAATGGTATAACAGCCTTGCACAATCTTCCGCCTTCACACGG ATCGAACGTTACTTTTCTTCAGGCATTGCAGCGCTGCTCAGCTCAGCGTT TTTCACTCTGTAATTCGATTCAAAAGCACTACTGTATACACTGCATTTTG TTTACGTTGTACGAGTAGTTTTGTGGATTTTCTGACAAAAATACAGATGC GACCTTACTTTACCTTACCCAGGACGTTGCTTCATAGACTACAGAGGGCT TTGCTTCAGTGAGGGTAAAGCGGGCCCGACGAACGCAACTCCGATGCAAC CGTCTTCTTCGCCGTCCCCTCGCAGATTACCCCAGACGCGGATACAGAAT ACTTTATGTTCTCTGAAAACCTTTTTGAGGTGGCGGAGCGCGGTGGGACC GGGTACAAGCGGGGCTCGGGGATGCCACTCCACTTTACCAAGGCCTTCAA CAGGCGCCCGTCGGACACCCCGCATTTTCCTTACTCCACGCGGCGCATGT GGTGAGAAATAAATTAAATATAAAAGAGAGAGAGAGAGAGGATTGCTGTT TTGGGTCCCTCGTTGCTGCGACCCGGAATGCTCCAAAGGGCGCAACGCTT CGAAACGATTTTTTTGCGTGCAGACGTGGCGTATGGGGTGCTCGAAATCA ATCCGCGCACGAAGCTCTCCCTCATGCCGGGCCTCGCAATCACCCTCTTG TCCTCTCCCCGTTACCGCTACCGTCACGGTTGATTGCTGACTGTTAACTG CTGCATTTTTCAAGGAGGGTGCTAGATATATTCGCCCCAAGCTTGGGTCT CTCCCCGTACACGGACAGCCTCGCGCGTGACTACCCCTTTTCCGTTAGGT AA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig6244:23445..25246-

>mRNA_F-serratus_M_contig6244.17094.1 ID=mRNA_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=CDS|length=990bp|location=Sequence derived from alignment at F-serratus_M_contig6244:23445..25246- (Fucus serratus male)
ATGGGCGACCTCGCCGTGAAGTACGGGTTCTACGGCAGTGAGTGGGACGC
CATGGATCCCTTCACCTATACCGAGGTGCGTATGGGCGACCTCGCCGTGA
AGTACGGGTTCTACGGCAGTGAGTGGGACGCCATGGATCCCTTCACCTAT
ACCGAGGTGCGTGCGGGAGAGGCACTCATGGTGACGGACCCCCAGGAGGC
ATGGGTTTTCCATATCCTTCCAGACGACACGTCGACGAGCGCGATATGGG
CGGCGCAGAGAGTGCCGGATGACCACGTCACCGTGGTTGCCAACCAATTC
ATTATAAAAGAGGCGGGAGAGGCACTCATGGTGACGGACCCCCAGGAGGC
ATGGGTTTTCCATATCCTTCCAGACGACACGTCGACGAGCGCGATATGGG
CGGCGCAGAGAGTGCCGGATGACCACGTCACCGTGGTTGCCAACCAATTC
ATTATAAAAGAGATTACCCCAGACGCGGATACAGAATACTTTATGTTCTC
TGAAAACCTTTTTGAGGTGGCGGAGCGCGGTGGGACCGGGTACAAGCGGG
GCTCGGGGATGCCACTCCACTTTACCAAGGCCTTCAACAGGCGCCCGTCG
GACACCCCGCATTTTCCTTACTCCACGCGGCGCATGTGATTACCCCAGAC
GCGGATACAGAATACTTTATGTTCTCTGAAAACCTTTTTGAGGTGGCGGA
GCGCGGTGGGACCGGGTACAAGCGGGGCTCGGGGATGCCACTCCACTTTA
CCAAGGCCTTCAACAGGCGCCCGTCGGACACCCCGCATTTTCCTTACTCC
ACGCGGCGCATGTGGAGGGTGCTAGATATATTCGCCCCAAGCTTGGGTCT
CTCCCCGTACACGGACAGCCTCGCGCGTGACTACCCCTTTTCCGTTAGGT
AAGAGGGTGCTAGATATATTCGCCCCAAGCTTGGGTCTCTCCCCGTACAC
GGACAGCCTCGCGCGTGACTACCCCTTTTCCGTTAGGTAA
back to top