prot_F-serratus_M_contig624.17090.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig624.17090.1
Unique Nameprot_F-serratus_M_contig624.17090.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length393
Homology
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 6.130e-85
Identity = 246/417 (58.99%), Postives = 268/417 (64.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKDQELFGGAGAGSV-------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGXXGVEXXXXXXXXXRHTATVKIEGSFGAARNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGVGPGATVQGAWEEGGQWYLHGQIHQAKLAVDSPCQMYVASEGQWVDAIVLAVGAED---------GDC--------RRFKVAYFEVGAEKETIVSGVEAPALRIPAGEGGAWPLXXXXXXXXXXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLKKEAKKERKRAREDKTEREKMLLDAMDADDAMGSYD 393
            MASYWVSQERYFCKYCKVWLS HQASIRNHDQGKKH  IVAEFFRKKREDKLKGA SESDLK QM++IEKAA  A +KD  +FGGAGAGS        PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXX G X   XXXXXXXXX          S   +  A               XXXXXXX                            A   G +EEGGQWYL GQIH+ KLAVD+ CQ ++ SEG WVDA+VLA+   +         GD         RR  +AYFE GAEKET++ GVEA A+R+PAGEGGAWP       XXXX       DENTGLGGWQTVSVR+VD AAEAE RR+KKE K            REKML++AMDADDAMGSYD
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGREGXXXXXXX----------------------------AAWDGVFEEGGQWYLDGQIHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXX-------DENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYD 382          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.260e-18
Identity = 132/419 (31.50%), Postives = 185/419 (44.15%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKDQELFGGAGAGSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGXXGVEXXXXXXXXXRHTATVKIEGSFGAARNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGVGPGATVQGAWEEGGQWYLHGQIHQAKLAVDSPCQMYVASEGQWVDAIVLAV-------------------GAE--DG--DCRRFKVAYFEVGAEKETIVSGVEAPALRIPAGE---GGAWPLXXXXXXXXXXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLKKEAKKERKRAREDKTEREKMLLDAMDADDAMGSYD 393
            MA YW S  ++ CK+C VW+  ++ S R H+ G +H+  V EFF+ +RE K +G+  + +L  ++ +IEKAA    +KD  +F  +   +V XXXXXXXXX          XXXXXXXX                    GV   XXXX         ++ G  G  R+                                              G    A V+G +   G  YL G+  + +L   +PCQ++V  +  W +AIV  V                   GA   DG  + +  + A  +   E + +  GV +  +R+  GE   GG   L  XXXXXX         DE+TGLGGWQTVSVR+VDE AE +       A+ +R R  ED   R +ML +AM+ +DAM SYD
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFKTSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXX--------------------GVRHPXXXXPH-------RVRGDVGGWRDVEKEEKEVNGGSEDV------------------------------TGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREEEAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXX--------VDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKR-RKEEDAQRRARMLAEAMEGEDAMSSYD 353          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.880e-10
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKDQE 81
            M  YW S ERYFCKYC +WL     S+R+H++ K+H   + E  + KR+ K+K    + DLK Q+D+IE+ A     +D +
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDMK 81          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A812E5P2_SEPPH (WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812E5P2_SEPPH)

HSP 1 Score: 70.5 bits (171), Expect = 8.900e-10
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            MA YW SQ R FC++CK WL+ ++ SI  H++GK+HQ  V +     ++  L  A  +S+++  M+Q+ KAAL+A KKD
Sbjct:    4 MADYWKSQPRKFCEFCKCWLTDNKPSIEFHEKGKRHQENVKKKIETIKKKSLADAQKKSEMESDMEQLNKAALEAFKKD 82          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A2C9L3S8_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L3S8_BIOGL)

HSP 1 Score: 67.0 bits (162), Expect = 9.720e-9
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            M+ YW S  R FC +CK W++ ++ S+  H++GK+HQ  V    ++ R+  L+ ++ +  LK  MD++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCDFCKCWITDNKPSVDFHERGKRHQENVELRLKEVRKKSLQKSADDEQLKKDMDKMEKAALEAFKKD 79          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A7S1GZF4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZF4_HEMAN)

HSP 1 Score: 63.2 bits (152), Expect = 1.170e-8
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKDQE 81
            M  YWVSQ RY+CK+C+ WLS  +A+   HD G +H+  V ++ +  R+ K +   +  D + +M  I++AA +  K D E
Sbjct:   26 MTEYWVSQARYWCKFCQCWLSDTKAARSKHDNGNRHKQSVEDWMKDNRKRKREERIANEDFEKEMRDIDRAAREQFKADVE 106          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: K1QUF4_CRAGI (WW domain-binding protein 4 (Fragment) n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QUF4_CRAGI)

HSP 1 Score: 66.6 bits (161), Expect = 1.190e-8
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    2 ASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            + YW SQ R FC+YCK W++ ++ S+  H++GKKHQ  V       R+  +K A  + +L+  + ++EKAAL+A KKD
Sbjct:    1 SEYWKSQPRKFCEYCKCWITDNKPSVDFHEKGKKHQENVKRKIEDVRKKGIKDAKQKEELEDDIQKMEKAALEAFKKD 78          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: A0A8B8DGY8_CRAVI (LOW QUALITY PROTEIN: WW domain-binding protein 4-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DGY8_CRAVI)

HSP 1 Score: 66.6 bits (161), Expect = 1.250e-8
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            M+ YW SQ R FC+YCK W++ ++ S+  H++GKKHQ  V       R+  +  A  + +L+  + ++EKAAL+A KKD
Sbjct:    1 MSEYWKSQPRKFCEYCKCWITDNKPSVDFHEKGKKHQENVKRKIDDVRKKSITDAKKQEELEDDIQKMEKAALEAFKKD 79          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: UPI0003598268 (WW domain-binding protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003598268)

HSP 1 Score: 66.2 bits (160), Expect = 1.590e-8
Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            M+ YW S  R FC++CK W++ ++ S+  H++GK+HQ  V    ++ R+  LK ++ + ++   M+++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCEFCKCWITDNKPSVEFHERGKRHQENVQLRLKEVRKKSLKDSAEQEEMDKAMEKMEKAALEAFKKD 79          
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Match: M4BW33_HYAAE (Matrin-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW33_HYAAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-8
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKREDKLKGASSESDLKWQMDQIEKAALQAIKKD 79
            M  YWVS+ER+ CKYC VW+   + SI++H+QG+KH+  V E  +  R  K    +++ +++ Q+ QIE+AA    ++D
Sbjct:    1 MVDYWVSRERHCCKYCNVWMPSDKTSIKHHEQGRKHKEKVEEVLKLNRRIKSDTKNAQKEIQNQLQQIEEAAHAKFEQD 79          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig624.17090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE6.130e-8558.99Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA3.260e-1831.50U1-type domain-containing protein n=2 Tax=Monodops... [more]
F0WHY0_9STRA1.880e-1040.74Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A812E5P2_SEPPH8.900e-1043.04WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
A0A2C9L3S8_BIOGL9.720e-940.51Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A7S1GZF4_HEMAN1.170e-837.04Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
K1QUF4_CRAGI1.190e-841.03WW domain-binding protein 4 (Fragment) n=2 Tax=Cra... [more]
A0A8B8DGY8_CRAVI1.250e-840.51LOW QUALITY PROTEIN: WW domain-binding protein 4-l... [more]
UPI00035982681.590e-837.97WW domain-binding protein 4 n=1 Tax=Aplysia califo... [more]
M4BW33_HYAAE1.710e-839.24Matrin-type domain-containing protein n=1 Tax=Hyal... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 347..378
NoneNo IPR availableGENE3D3.30.160.60coord: 9..62
e-value: 2.5E-8
score: 35.9
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..43
e-value: 3.3E-6
score: 36.6
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 9..43
e-value: 4.4E-10
score: 39.1
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 1..261
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.358
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig624contigF-serratus_M_contig624:346811..353899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig624.17090.1mRNA_F-serratus_M_contig624.17090.1Fucus serratus malemRNAF-serratus_M_contig624 346811..353899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig624.17090.1 ID=prot_F-serratus_M_contig624.17090.1|Name=mRNA_F-serratus_M_contig624.17090.1|organism=Fucus serratus male|type=polypeptide|length=393bp
MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVAEFFRKKRED
KLKGASSESDLKWQMDQIEKAALQAIKKDQELFGGAGAGSVPPPPPPPPP
PSDDIPPPPPPPRHPQEEDANAYSEEPPPPPPPPPGGPPGVEDEPTPPPP
PRHTATVKIEGSFGAARNAAPPPPPPGGLPGVEDEPIPPPPPGHTAMVKI
EESFEAARNAAPNVGVGPGATVQGAWEEGGQWYLHGQIHQAKLAVDSPCQ
MYVASEGQWVDAIVLAVGAEDGDCRRFKVAYFEVGAEKETIVSGVEAPAL
RIPAGEGGAWPLPLELEAPPPPPPPPPPADENTGLGGWQTVSVRLVDEAA
EAETRRLKKEAKKERKRAREDKTEREKMLLDAMDADDAMGSYD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR040023WBP4
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf