prot_F-serratus_M_contig624.17082.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig624.17082.1
Unique Nameprot_F-serratus_M_contig624.17082.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length307
Homology
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: D8LGP2_ECTSI (LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP2_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 8.920e-62
Identity = 133/291 (45.70%), Postives = 164/291 (56.36%), Query Frame = 0
Query:    8 ASSTKELDPNHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELASAGVRELFTAGDTXXXXXXXXXXXXXXXXXXXXXPGSAHSASRAGREKHEQRCSRFAGDRECDASRGRAGEDVDLERGGSQTSGVA---VPFLVVGNKRDVGEGVRGKGEAFAAELGAPHVTVSAREWGGGSDEPFERFFDAIFRHRVGVGGTAASQAVPFEGDYDSSWNF 295
            AS+ K  DP+HARVLVVGPM +GKTTLV S C   GG+ V         PTVGC+V+VKLLAGG P RS+EFWDVGG+P+AA AR MF+E    +GVLLVYDV+ PRSLR+L  W AEL SAG+  L  +G+                        S+ +AS +GR     R + +  D     S G A    DLE GGS T+ V    VP +VVG K D GEGVR +G A A+ELG  HV V A +     +  F+RFF  +FRH  G+      QA P   D     +F
Sbjct:    3 ASAGKNFDPHHARVLVVGPMAAGKTTLVHSFCHGGGGNGVPGNTL----PTVGCSVDVKLLAGGHPNRSIEFWDVGGSPDAALARGMFFEGCEAAGVLLVYDVSIPRSLRDLRVWVAELDSAGISILGKSGNNGR---------------------SSATASSSGRSLRSGRSTEYPPDF---FSEGLA---ADLEGGGSGTAAVGGGRVPLIVVGAKADTGEGVRREGGALASELGVGHVAVCASKLSNEEEALFDRFFGEVFRHHSGL------QAPPLGEDVQKMLSF 256          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: A0A6H5JCT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.710e-53
Identity = 117/255 (45.88%), Postives = 143/255 (56.08%), Query Frame = 0
Query:    8 ASSTKELDPNHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELASAGVRELFTAGDTXXXXXXXXXXXXXXXXXXXXXPGSAHSASRAGREKHEQRCSRFAGDRECDASRGRAGEDVDLERGGSQTSGVA---VPFLVVGNKRDVGEGVRGKGEAFAAELGAPHVTVSAR----EWGGG 255
            AS+ K  DP+HAR+LVVGPM +GKTTLV S C    G+ V   R     PTVGC+V+VKLLAGG P RS+EFWDVGG P+AA AR MF+E    +GVLLVYDV+ PRSLR+L  W AEL SAG+  L  + +                        S+ +A  A   +  +    F  +          G   DLE GGS T+ V    +P +VVG K D GEGVR +G A A+ELGA HV V  R    E GGG
Sbjct:    3 ASAGKNFDPHHARILVVGPMAAGKTTLVHSFCHGGVGNGVPGNRL----PTVGCSVDVKLLAGGHPNRSIEFWDVGGRPDAALARGMFFEGCEAAGVLLVYDVSTPRSLRDLRVWVAELDSAGISVLGESDNNGR---------------------SSATAPYARSLRSTEHPPYFFSE----------GLTADLEGGGSGTAAVGGGRIPLMVVGAKADTGEGVRREGGALASELGAGHVAVKVRFETVERGGG 222          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: L1I819_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I819_GUITC)

HSP 1 Score: 72.0 bits (175), Expect = 4.940e-11
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   20 RVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNV-----EVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAE 125
            R+LV+G    GKT+L+  +C   G ++      RRP  TVGC V     E KLL G   +  VEFWD+GG+     +R++FY ++ + GV+LV+DVTN  S R L  W  E
Sbjct:   12 RLLVMGDSGVGKTSLMHLICE--GEEL------RRPRSTVGCTVHMKLHESKLLPGKTAF--VEFWDLGGSARFQTSRQVFYSNA-VDGVILVHDVTNSISRRNLEKWKQE 111          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: A0A383WPR0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPR0_TETOB)

HSP 1 Score: 72.4 bits (176), Expect = 6.560e-11
Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   20 RVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLL------AG-GRPYRS-VEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELASAG 130
            R++VVG    GKT L E +  A G    ASR       T GC++ VKL+      AG G P R  VE WDV G P+    R +FY+   I+GV+LVYD+TN ++L  L  WAAE+   G
Sbjct:   21 RLVVVGEPFVGKTALTELI--ANGQPSKASRS------TAGCHIHVKLVDTSGSQAGDGTPRRFFVELWDVSGQPKYEQLRSVFYKQ--INGVILVYDLTNRKTLARLTKWAAEITQYG 129          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: L8GMJ7_ACACA (Ras subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMJ7_ACACA)

HSP 1 Score: 70.1 bits (170), Expect = 3.720e-10
Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   20 RVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLLA-GGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAEL 126
            RVLVVG    GKT L   +C+   G+++ +        T+GC+ EVK+    GRPY  +EFWD+GG+ + A +R + +   SI+G++LV+D+TN +S + +  W  ++
Sbjct:   20 RVLVVGDSGIGKTVLSHLVCK---GEVLPNSSY-----TIGCSTEVKIHEFKGRPYY-IEFWDLGGSKKYAESRGVVFNHLSINGLILVHDLTNRKSYKNIGLWIKQV 118          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: UPI00140214D0 (rab-like protein 3 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140214D0)

HSP 1 Score: 68.2 bits (165), Expect = 1.100e-9
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   17 NHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKL--LAGGRPYRS---VEFWDVGGNPEAAP----ARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAE 125
            +  +VLV+G    GK++LV  LC+        +R    P  TVGC+V+V+L     G P      VE WDVGG+  +A     AR  FY  SS +G++LV+D+TN +SL+ LH W  E
Sbjct:    5 DRVKVLVLGDSGVGKSSLVHLLCQ--------NRILGNPSWTVGCSVDVRLHDYKEGTPAEKTFHVELWDVGGSVGSASSIKSARSNFY--SSSNGIILVHDLTNKKSLQNLHRWLLE 112          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: A0A6P7GS40_DIAVI (rab-like protein 3 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GS40_DIAVI)

HSP 1 Score: 64.3 bits (155), Expect = 2.210e-8
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   17 NHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKL---LAGGRPYRS--VEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELA 127
            +  R+LV+G    GKT+ V             +   R P  TVGC+V+VKL     G +  ++  VEFWD+GG+     AR +FY  +   G +LV+D+TN +S + LH W  E++
Sbjct:    5 DRVRILVLGDSGVGKTSFVHLAAH--------NEPLRSPSWTVGCSVDVKLHEYKEGMKDQKTFFVEFWDIGGSHSHRNARPVFY--NPFHGAILVHDLTNRKSEKNLHKWVREIS 110          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: A0A653CK68_CALMS (Uncharacterized protein n=2 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CK68_CALMS)

HSP 1 Score: 63.2 bits (152), Expect = 5.940e-8
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0
Query:   20 RVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPP-TVGCNVEVKL---LAGGRPYRS--VEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELASAGVRE 133
            ++LV+G    GKT+ V         ++ A     R P  TVGC+VE+KL    AG +  ++  VEFWDVGG+     AR +FY      G +LV+D+TN +S + L+ W  E+ +   R+
Sbjct:    8 KILVLGDTGVGKTSFV---------NLAAHNEPLRSPSWTVGCSVEIKLHEYKAGTKDQKTYFVEFWDVGGSQIHKNARSVFYHPCH--GAILVHDLTNSKSEKNLNKWVREIVNKRERK 116          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: Q54LP6_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54LP6_DICDI)

HSP 1 Score: 64.3 bits (155), Expect = 7.890e-8
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   17 NHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAEL 126
            +  RVLV+G    GK++LV  +C     D   +R    P  TVGCN +VK+         +EF D+GG+ +    R + Y    ISG+++VYD+TN  SL+ +  W  E+
Sbjct:   52 DRVRVLVIGDTAVGKSSLVHLICN----DQALTRS---PSWTVGCNTDVKIHEYHSKDYYIEFIDIGGSTKYKITRPILYHQ--ISGIIVVYDLTNKISLKNVKKWIFEV 152          
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Match: Q9VXA9_DROME (RE04047p n=5 Tax=melanogaster subgroup TaxID=32351 RepID=Q9VXA9_DROME)

HSP 1 Score: 61.6 bits (148), Expect = 2.680e-7
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   17 NHARVLVVGPMLSGKTTLVESLCRACGGDMVASRRNRRPPPTVGCNVEVKLLAGGRPYRS---------VEFWDVGGNPEAAPARRMFYEDSSISGVLLVYDVTNPRSLRELHAWAAELAS 128
            N  R++VVG    GKT+L   +          +    RP  TVGCN++VK+     P+R          VE +DVGG+      R +FY  + I G++LV+D+TN +S R+L  W  E+ +
Sbjct:    5 NRVRIVVVGDSGVGKTSLTHLITH--------NEALIRPGWTVGCNIQVKM----HPFREGTARECPYFVELFDVGGSLNHKNTRSVFY--AGIDGIILVHDLTNAKSQRQLIDWLYEIVN 111          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig624.17082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LGP2_ECTSI8.920e-6245.70LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
A0A6H5JCT8_9PHAE1.710e-5345.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1I819_GUITC4.940e-1141.44Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A383WPR0_TETOB6.560e-1142.86Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
L8GMJ7_ACACA3.720e-1037.04Ras subfamily protein n=1 Tax=Acanthamoeba castell... [more]
UPI00140214D01.100e-939.83rab-like protein 3 isoform X1 n=2 Tax=Petromyzon m... [more]
A0A6P7GS40_DIAVI2.210e-835.34rab-like protein 3 n=1 Tax=Diabrotica virgifera vi... [more]
A0A653CK68_CALMS5.940e-835.83Uncharacterized protein n=2 Tax=Callosobruchus mac... [more]
Q54LP6_DICDI7.890e-835.45Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
Q9VXA9_DROME2.680e-733.88RE04047p n=5 Tax=melanogaster subgroup TaxID=32351... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 20..128
e-value: 6.5E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 19..251
NoneNo IPR availablePANTHERPTHR24073:SF128RAB-LIKE PROTEIN 3coord: 19..251
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig624contigF-serratus_M_contig624:173371..176771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig624.17082.1mRNA_F-serratus_M_contig624.17082.1Fucus serratus malemRNAF-serratus_M_contig624 172540..187168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig624.17082.1 ID=prot_F-serratus_M_contig624.17082.1|Name=mRNA_F-serratus_M_contig624.17082.1|organism=Fucus serratus male|type=polypeptide|length=307bp
MYSFPEGASSTKELDPNHARVLVVGPMLSGKTTLVESLCRACGGDMVASR
RNRRPPPTVGCNVEVKLLAGGRPYRSVEFWDVGGNPEAAPARRMFYEDSS
ISGVLLVYDVTNPRSLRELHAWAAELASAGVRELFTAGDTSASGGGGSNL
PGGSGKRADSGPGSAHSASRAGREKHEQRCSRFAGDRECDASRGRAGEDV
DLERGGSQTSGVAVPFLVVGNKRDVGEGVRGKGEAFAAELGAPHVTVSAR
EWGGGSDEPFERFFDAIFRHRVGVGGTAASQAVPFEGDYDSSWNFPDDSN
APGVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase