mRNA_F-serratus_M_contig622.17060.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: D7G0L6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L6_ECTSI) HSP 1 Score: 1127 bits (2914), Expect = 0.000e+0 Identity = 879/1669 (52.67%), Postives = 1052/1669 (63.03%), Query Frame = 3
Query: 252 QFGGANEITVLDCTSESGVAVYTLSVCLLLLFTCGLPNMVRYLVQFLFAAVESNDGVIRSFSQAKEVHYATLDSLALFPKDAVWLEKRRREVSLIQRVAKRSRRKMWRAVISCMRRVTYLQRLPGIRFVRRKNVGAYSAEDEECGVDNGSSGIGGKGNELGGTRGGEHNAIAVVIGVNGRKSDNNQNERDLRKITTRLWSPETDEMLDRSFSSRASDEDSNERLQSKLAAETTAVTSV-----GIGEDSVVSGNKELTRR-------------------------RRATAQPSSLAVYLSKRKRACTGLREALLAERDAFCNAEHEYVLALSDFEADHTLEITCWESVVDTSGLVYLSESYTWSRPAWKVVESFERGACVTAIILSRQIGPASTQFLVGALVLAVFQVYTLQAEPFLHLNDAVLDFGLRVTLIVFLCIEAGVDLGIIKSHVADAVLLATGGSGALAVLLSGDAIGAVLQTVGRAVTLVDDRASDFLFCQVSERSLGLECSHSGLRLLAQWDDLLEQQRRSAFLAWPTRTPSDLLSTHEKILVVRWAALRGIDIRRARTSTGMSLLHDSIIKAEVEPSRWLVHLYPTLLESETLNKESPILLGILETARVMLKIEKLGVRMENWSTGISDNASQTASAESIESL--IGGAAGQ-------------------EEKKRAADEEKLGELTWKIGKLMEIFLSTELQNATIKWNTHQYDLLTEHGEPDMSELAQHLAEAFNFRPPQGYTLRHRWRMRAQFIREYLGEATCASRSKVELPGCGLGDLGYKTLLSICRSLSIPATTFTWPSAYITHHQIHVVKLDLTGNRLQHKSGCRIAEMLLLNKTLEDLNLSDNALGSQAKHSLSLAASEIFSAVRKSETLKKLDLARNRIGPEAGDALGSMISTNRSLSHLDLSDNQMGERKFWENMSEFVFIPSAGLXXXXXXXXXXXXTVLKVKGNLLGADTGQAFAKGVERHHSLTSLDLSYNLILPQGGRTIAMHLGFPANSXXXXXXXXXXHLGKKAGKLFSSMLKRNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATVDGGNPSGEGLVLGDGLRXXXXXXXXXXXDNHLPAQEMQHITDGLCAHPSLSHLTLAGNTLNDTAARNVGRL---AASERLVALDLARTALADSGAIAVIRAFSS-AGGLKCLDLSDNFLGEGATRELAIALQGRISVGRARERFAVRVLRLARCNLGPTGGALVARALGTKCSVEELDLSGNGLGAVAGKALAKSLRVQYLNGKQARTKHFSDMRGDAQLGVRPCSIRRLDVSHNPLGNGAGVAILGALTNVSTEYLDLSRTELRGEIAGCAIGRMLRCPTVVLRYLDVKHNDLGRDGVNKVFWAIRRNTSLLHLDLSDNHVGSVFGTEADELKEYGTTSIQSALSLNQTLRSLALGTNGLSAECGITLMTSMDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGNFAEVGVKFGDALVRNKTLTSLNLEGNKLGPSGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLLKVNFTIREVGASVGEIGIDSRGTIDDMLAARERVFE 5093
Q G E+ VL+CTS SGVAV+TLS CL+L F CGLPNMVRYLV+FLF +N VIRSF QA+EVH +TL++L FPKD VWL +RRRE++ + A R RR+ R V+ +RRV ++RLPGIR RRK + + D G + ELG T V G+ ++ + E D + + +P T + D + + L L+ TT T++ G+ E + E T+R ++ S L + +R++A G+R+AL AER+AF NA E++LALSDFE+DH+LEITCWESVVDTSGL+YLSESYTW R WKVVE ERGA VTA+++S+ +GPASTQ LVGALVLAVFQ +T +AEPFL+ +A+LD GLRV LI+ LCI A G + +V D LLA G +G A L+ G+ + + VG+ + D+R +D LF Q I VVRWA+LRG+DI RARTSTG+SLLHDS+I AEVEP+RWLVHLYP LL +ETL+KESP+LLGILETARV+L++E L R+ +W + D+ASQ + L +GG G EE ++ ADEE++ L WK+G+L E+FLS ELQNA ++WN HQYDLLTEHGEPD+SELAQ+LAEAFN +PP+GY HRWR RA+F R+ LGEATCASRS V+L GCGLGD GYK+LLSICR+LS+ ATTFTWPS Y T +I+VV++DL+GNR++ KSG RIA+MLLLNKT+ DLNLS NAL S A A EIF A RK GERKFW E + +PSAG TVLKVKGNL GADTG AFA GV RH +A+ L S H+GKKA LFS+ LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AT +GG+PS GL LG GLR N LP EMQ I +GL H SL+HLTL G +ND+AA ++GRL A+ LV+LDL+R+ALA GA+AV RA ++ A GL+ LDLSDN L + A ELA ALQ GRA VR L LARC LGP GGALV RALG +VEELD+S NG ALA+SLRV Y NGK VRPC +RRLD+S NPLGN AGVAILGAL N T++LDLS TELRG+ AG AIGRMLRC T+VL++L+V+HN+LGR GVN+VFWA+RRN SLLHLD+SDN G++FGTEAD+L+E LSAECG TL S+ +N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE G A+VG KF ALV+NKTLT LN+EGN LGPSGGV XXXXXXXXXXXXXXXXXXXXXXXXX VNFT+ VGASVGE+GIDSR TID+MLAARE++ E
Sbjct: 349 QLEGTAEMIVLECTSTSGVAVHTLSACLVLFFACGLPNMVRYLVRFLFEGFNANVDVIRSFLQAREVHQSTLEALTPFPKDVVWLARRRREIAFARNAANRLRRRALRVVVVSLRRVPLVRRLPGIRPRRRK-------KQKRSLADTGREKLSISDEELGAT------TATVQAGL----GESVRIEEDNKDPPAPIGAPGTT-LRDVDLYGPGDKHSTQKTLV--LSQGTTGATALLEGVAGVAETTTARSGPEETKRPYKAGGXXXXXXXXXXXXXXXXALTEKSEKSHSRLEEFWRRRRKASVGMRQALQAEREAFANASQEFILALSDFESDHSLEITCWESVVDTSGLLYLSESYTWQRSEWKVVEGLERGAFVTAVVVSQHLGPASTQLLVGALVLAVFQTWTFRAEPFLYYREALLDTGLRVALILVLCIGAAGAGGAVPKYVVDTFLLAVGLAGIAAALVLGEVVRGAMVFVGKTLAAADERVNDLLFRQ--------------------------------------------------IFVVRWASLRGLDISRARTSTGLSLLHDSVINAEVEPTRWLVHLYPVLLHAETLHKESPLLLGILETARVLLRMEALTARLNDWGLDLPDSASQAGQGSLLGGLGLLGGNVGXXXXXXXXXXXXXXXGGVATEEIQKEADEEEVAALAWKVGRLAEMFLSNELQNAELRWNAHQYDLLTEHGEPDLSELAQNLAEAFNVKPPKGYAHVHRWRKRARFTRDCLGEATCASRSDVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGA-------AKEIFFAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERKFWLPTGEIMHVPSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHXXXXXXXXXXXXXXXXXXXXLALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGIATAEGGDPSDLGLALGHGLRINKTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAG--CGVRFLGLARCGLGPVGGALVCRALGGNRTVEELDMSDNGXXXXXXMALARSLRVLYRNGKT----------------VRPCRMRRLDISRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEXXXXXXXXXXXXXXXXXXXXXXXXXLSAECGSTLTASIRRNRCLANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGMLADVGGKFAAALVKNKTLTRLNMEGNTLGPSGGVAIAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNFTLHSVGASVGEVGIDSRETIDNMLAAREKMLE 1922
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: A0A835YNL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL2_9STRA) HSP 1 Score: 350 bits (899), Expect = 6.210e-94 Identity = 249/715 (34.83%), Postives = 353/715 (49.37%), Query Frame = 3
Query: 1086 LREALLAERDAFCNAEHEYVLALSDFEADHTLEITCWESVVDTSGLVYLSESYTWSRPA-----------------------WKVVESFER-------GACVTAIILSRQIGPASTQFLVGALVLAVFQVYTLQAEPFLHLNDAVLDFGLRVTLIVFLCIEAGVDLGIIKSHVADAVLLATGGSGALAVLLSGDAIGAVLQTVGRAVTLVDDRASDFLFCQVSERSLGLECSHSGLRLLAQWDDLLEQQRRSAFLAWPTRTPSDLLSTHEKILVVRWAALRGIDIRRARTSTGMSLLHDSIIKAEVEPSRWLVHLYPTLLESETLNKESPILLGILETARVMLKIEKLGVRMENWSTGISDNASQTASAESIESLIGGAAGQEEKKRAADEEKLGELTWKIGKLMEIFLSTELQNATIKWNTHQYDLLTEHGEPDMSELAQHLAEAFNFRPPQGYTLRHRWRMRAQ---------------------------FIREYLGEATCASRSKVELPGCGLGDLGYKTLLSICRSLSIPATTFTWPSAYITHHQIHVVKLDLTGNRLQHKSGCRIAEMLLLNKTLEDLNLSDNALGSQAKHSLSLAASE-IFSAVRKSETLKKLDLARNRIGPEAGDALGSMISTNRSLSHLDLSDNQMGERKFWENM--SEFVFIPSAGLXXXXXXXXXXXXTVLKVKGNLLGADTGQAFAKGVERHH 3050
LR+AL ER A+ A +Y+LAL+DFE HTLEIT +VVDT+GL+ L + W RP W+ E+ AC++ +++ +G AS Q L A +T +A+PFLH +A LD LR +L++++ + G + S +A A L+A + A+ +L D ++ V VD D LF QV +LGLE H G+ LL+QWDDLL+ QR S F+AWP+ P LLS K++ VRWAALRG+ I RTST +SLLHD+ I+AEVE +RWL+H +P LL SET+ +E P+ LG+LE A +L++ A + A+A A+D + E WK G+ + +FLS L+ A I W+ HQY + + +ELAQHLAEAF+ PP+GY+ + RW A ++E+L A CA V L GLGD G L ++C L+ F PS + + V LDL NRL + +A L N+TLE ++LSDN L S + +++LAA +F +R R RIGPEAG AL ++ R+L L++ N MGER+FW++ + I AG T L + G LG + G A A +ER H
Sbjct: 634 LRKALEEERHAYQAARADYILALADFECMHTLEITESCAVVDTAGLLRLVDPLDWRRPPSXXXXXXXXXXXXXXXXXXXXPLWRRTMQLEQVCLALLEQACLS--LVAAVLG-ASAQLLGMAAXXGASAAHTARAQPFLHEQEARLDSSLR-SLLLWVTLIGAAQAGGMPSWLAAAALVAVTLAAAVVLLRLADLGSLLMAFVHGLRAFVDSGVEDLLFSQVHRHALGLETGHEGVLLLSQWDDLLQDQRWSGFMAWPSPVPGTLLSLQNKVMTVRWAALRGLSIDAMRTSTTLSLLHDAFIRAEVEAARWLMHHHPQLLSSETVTREGPVYLGLLEMASTLLRL-----------------ADEQATAPPP---------------ASDGAVMTEARWKAGQFLRLFLSPPLRAAPIVWDAHQYAAMGARAGAEAAELAQHLAEAFDLNPPRGYSRKSRWAAYAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEFLAAALCACHPNVSLVSAGLGDGGLPALRALCHVLAARDIPFIPPSLDRLAYPVVVRMLDLRANRLGTAASVPLAAALHANRTLEAVDLSDNDLDSDSAAAIALAAPHTVFRRLRY----------RFRIGPEAGPALAQLLRRARALQTLNVGGNSMGERRFWDDARPDSMIVITGAGEALGVALAANRGLTHLGLTGCRLGPEGGIALAAALERPH 1302
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: A0A7S2FUC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUC3_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.570e-37 Identity = 90/193 (46.63%), Postives = 120/193 (62.18%), Query Frame = 3
Query: 3951 VEELDLSGNGLGAVAGKALAKSLRVQYLNGKQARTKHFSDMRGDAQLGVRPCSIRRLDVSHNPLGNGAGVAILGALTNVSTEYLDLSRTELRGEIAGCAIGRMLRCPTVVLRYLDVKHNDLGRDGVNKVFWAIRRNTSLLHLDLSDNHVGSVFGTEADELKEYGTTSIQSALSLNQTLRSLALGTNGLSAECG 4529
+ LDLS N + AGKALA+ + + +G+ R C IRRL++ NP+G+ AGV IL AL+N EYL+L + EL + G +GR LR PT+ L++++N LG+DGVN VFWA+RRN SL LDLS NH+G FGTE D L E+GT S+ +A+ +N TLR L LG NG+SAE G
Sbjct: 5 ITSLDLSFNRMDEEAGKALAEGIETKMDSGRV----------------TRKCKIRRLNIYGNPIGSVAGVEILTALSNDVPEYLNLGQCELDHAV-GEQLGRALRVPTIGWTELNLENNKLGKDGVNPVFWALRRNVSLTSLDLSTNHIGPQFGTEEDNLGEHGT-SVVAAIEMNFTLRWLDLGNNGISAEAG 179
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: A0A7S1XYV7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYV7_9STRA) HSP 1 Score: 156 bits (395), Expect = 7.080e-35 Identity = 244/546 (44.69%), Postives = 307/546 (56.23%), Query Frame = 3
Query: 3447 GGNPSGEGLVLGDGLRXXXXXXXXXXXDNHLPAQEMQHITDGLCAHPSLSHLTLAGNTLNDTAARNVGRLAA--SERLVALDLARTALADSGAIAVIRAFSSAGGLKCLDLSDNFLGEGATRELAIALQGRISVGRARERFAVRVLRLARCNLGPTGGALVARALGTKCSVEELDLSGNGLGAVAGKALAKSLRVQYLNGKQARTKHFSDMRGDAQLGVRPCSIRRLDVSHNPLGNGAGVAILGALTNVSTEYLDLSRTELRGEIAGCAIGRMLRCPTVVLRYLDVKHNDLGRDGVNKVFWAIRRNTSLLHLDLSDNHVGSVFGTEADELKEYGTTSIQSALSLNQTLRSLALGTNGLSAECGITLMTSMDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGNFAEVGVKFGDALVRNKTLTSLNLEGNKLGPSGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLLKVNFTIREVGASVGEIGIDSRGTIDDMLAAR 5078
GG+ G G+ L + ++P +EM + G+ + +L H+ L G ++D AA + L +ER+ L + A A A L+ L LS N +GE +LA + E + L L ++ G + +AL S+ LDL GN L AG+ LA+S+R G + +R C +R L + LG AG IL + N T + + + G G +G+ LR V + L+++ N LG+DG+N +FWA+RRNT L LDLS N G FGT AD+L+EYG S+ SAL LN TL L LG NGLSAECG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VG F +L++NK L LNLE N+ GP+ + XXXXXXXXXXXXXXXXXXXXXXXXX +VN TI+E+ S EIGIDS+ +D +L AR
Sbjct: 331 GGSVDGMGMELKGAFEANRTLCRLDLANTNIPMREMNQMATGMAGNAALEHIDLTGIRVSDIAAIQLAVLILRFAERVYLTGCNMNPLPCA---AFTDALKGAKFLQHLSLSQNHVGERGANQLAEFINA--------EGIHIERLELREAHIDGDHGTRLFQALAQNSSITYLDLCGNALSDQAGQELAESMRTVIEKG----------------MVLRKCHVRTLLADNCSLGPEAGERILANMQNTITIKISMGHNNI-GSAGGTVVGQALRKGFVAWKELNLESNGLGKDGLNDIFWALRRNTILKSLDLSGNEAGPTFGTSADDLEEYGN-SLGSALKLNVTLNWLDLGNNGLSAECGSNFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDKG---VGDAFARSLMKNKALAKLNLEDNRFGPTQIMEIVHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVNTTIQEIIVSEDEIGIDSKAAMDRILGAR 844
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: A0A7S2C022_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C022_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.340e-25 Identity = 49/116 (42.24%), Postives = 81/116 (69.83%), Query Frame = 3
Query: 1698 GLRLLAQWDDLLEQQRRSAFLAWPTRTPSDLLSTHEKILVVRWAALRGIDIRRARTSTGMSLLHDSIIKAEVEPSRWLVHLYPTLLESETLNKESPILLGILETARVMLKIEKLGV 2045
GL+LL QWD LL++QR +A L+WP P LL+ EK +V+WAA RG+ + + R TG+++LH++++KAE + +W++H YP LL++E +++PI+ + E A+ +L IE G+
Sbjct: 17 GLKLLQQWDQLLKEQRMTALLSWPRTIPDSLLTKREKRRIVKWAAWRGLFLDKIRNETGVTVLHNAMVKAEADAIKWIIHTYPHLLKAEDDARDTPIVTALKECAQTLLSIESEGL 132
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: UPI0018860775 (protein NLRC5-like isoform X1 n=15 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018860775) HSP 1 Score: 70.5 bits (171), Expect = 4.660e-8 Identity = 85/278 (30.58%), Postives = 123/278 (44.24%), Query Frame = 3
Query: 3528 DNHLPAQEMQHITDGLCAHPSLSHLTLAGNTLNDTAARNVGR-LAASE-RLVALDLARTALADSGAIAVIRAFSSAGGLKCLDLSDNFLGEGATRELAIALQGRISVGRARERFAVRVLRLARCNLGPTGGALVARALGTKCSVEELDLSGNGLGAVAGKALAK-------SLRVQYLNGKQARTKHFSDMRGDAQLGVRPCSIRRLDVSHNPLGNGAGVAILGALTN--VSTEYLDLSRTELRGEIAGCAIGRMLRCPTVVLRYLDVKHNDLGRDGV 4328
D L + + + L + SL L L N L D + LA E L L L+ L+ A+ SS G L+ LDLS N L + LA L A+ + ++VL L +C L +A L + CS+ EL+LS N LG +ALA +L V LN + K + A + PCS+R L++S N LG+ A+ L + + L+L + EL + A+ +L P LR LD+ NDLG DG+
Sbjct: 1426 DCQLSKKSCEALASVLSSPGSLRELGLGDNDLGDDGLEPLAAGLAKPECTLQVLGLSGCKLSKKSCEALASVLSSPGSLRELDLSHNDLYDDGLEALAAGL--------AKPQCTLQVLGLEQCELSKKSCEALASVLSSPCSLRELELSCNDLGDDGLEALAAGLAKPQCTLEVLGLNCCELSKKSCEAL---AFVLSSPCSLRELELSCNDLGDDGLEALAAGLAKPQCTLQVLELEQCELSKKSCE-ALASVLSSPCS-LRKLDLGWNDLGNDGL 1690
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: UPI001885CC03 (LOW QUALITY PROTEIN: uncharacterized protein LOC119128354 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885CC03) HSP 1 Score: 67.4 bits (163), Expect = 4.200e-7 Identity = 151/658 (22.95%), Postives = 244/658 (37.08%), Query Frame = 3
Query: 2580 LDLTGNRLQHKSGCRIAEMLLLNKTLEDLNLSDNALGSQAKHSLSLAASEIFSAVRKSETLKKLDLARNRIGPEAGDALGSMISTNRSLSHLDLSDNQMGERKFWENMSEFVFIPSAGLXXXXXXXXXXXXTVLKVKGNLLGADTGQAFAKGVERHHSLTSLDLSYNLILPQGGRTIAMHLGFPANSXXXXXXXXXXHLGKKAGKLFSSMLKRNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATVDGGNPSGEGL-VLGDGL-RXXXXXXXXXXXDNHLPAQEMQHITDGLCAHPSLSHLTLAGNTLNDTAARNVGRLAASER--LVALDLARTALADSGAIAVIRAFSSAGGLKCLDLSDNFLGEGATRELAIALQGRISVGRARERFAVRVLRLARCNLGPTGGALVARALGTKCSVEELDLSGNGLGAVAGKALAK-------SLRVQYLNGKQARTKHFSDMRGDAQLGVRPCSIRRLDVSHNPLGNGAGVAILGALTN--VSTEYLDLSRTELRGEIAGCAIGRMLRCPTVVLRYLDVKHNDLGRDGVNKVFWAIRRNTSLLHLDLSDNHVGSVFGTEADELKEYGTTSIQSALSLNQTLRSLALGTNGL 4514
L L +L KS +A +L ++TL L+LS N L +L+ + + TL+ L L ++ ++ +AL S++S+ SL+HLDLS N + + ++ SAGL VLK++G L + +A A + SL LDL+YN + G +A L P L KK+ + +S+L + + +GL VL GL + L + + + L + +LSHL L+ N L D + A + L L L L+ A+ SS G L+ L+L N L + LA L A+ + ++VL+L C L +A L + S+ LDLS N L +ALA +L+V L G + K + A + P S+R+LD+++N L + A+ L + + L L R +L + A+ +L P LR LD+ +NDL D + + + + L V + +L + ++ S LS ++TL L L N L
Sbjct: 3504 LKLYHCQLSKKSCEALASVLSSSRTLSHLDLSSNDLRDDGLEALTAGLA------KPQCTLEVLGLYCCKLSTKSCEALASVLSSPGSLNHLDLSGNDLHDHG--------LYALSAGLAKPRCTLQ-----VLKLRGCQLSKKSCEALASVLSSPGSLRELDLAYNDLRDDGLEALAAGLAKP-QCTLQVLWLRNCQLSKKSCEALASVLSS------------------------------------------------------------------PGSLRELDLSWNDLHDDGLEVLAAGLAKPQCTLQVLRLRKCQLSKKSCEALASVLSSSRTLSHLDLSWNNLRDDGVEALAAGLAKPQCTLQVLKLCYCQLSKKSCEALASVLSSPGSLRELELGYNDLCDDGLEALAAGL--------AKPQCTLQVLKLRGCKLSKKSCEALASVLSSPGSLSHLDLSWNNLRDDGVEALAAGLAKPQCTLQVLKLRGCKLSKKSCEAL---ASILSSPGSLRKLDLAYNDLRDDGLEALAAGLAKPQCTLQVLGLQRCKLSKKSCE-ALASVLSSPGS-LRELDLGYNDLCDDRLEALAAGLAKPQCTLQ----------VLKLQRCKLSKKSCEALASVLSSSRTLSHLDLSWNDL 4052
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Match: UPI001B7E4063 (NACHT, LRR and PYD domains-containing protein 3-like isoform X1 n=4 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E4063) HSP 1 Score: 65.5 bits (158), Expect = 1.310e-6 Identity = 60/237 (25.32%), Postives = 98/237 (41.35%), Query Frame = 3
Query: 2418 ATCASRSKVELPGCGLGDLGYKTLLSICRSLSIPATTFTWPSAYITHHQIHVVKLDLTGNRLQHKSGCRIAEMLLLNKTLEDLNLSDNALGSQAKHSLSLAASEIFSAVRKSETLKKLDLARNRIGPEAGDALGSMISTNRSLSHLDLSDNQMGERKFWENMSEFVFIPSAGLXXXXXXXXXXXXTV--LKVKGNLLGADTGQAFAKGVERHHSLTSLDLSYNLILPQGGRTIAMHL 3122
+T S + ++L G LGD G K L R+L + +L LT N L ++ ++ N++L DL+L N LG LS+A + +++ L L N + L S+ISTN+SL+ LDL +NQ+G+ AG+ T+ L + N L + + + + SLT LDL N + G + +++ L
Sbjct: 784 STNQSLTDLDLGGNRLGDAGVKLLSVALRNLGCK-----------------IQRLSLTNNNLTDSCAKDLSSVISTNQSLTDLDLGGNRLGDAGVKLLSVALRNLGCKIQR------LSLTNNNLTDSCAKDLSSVISTNQSLTDLDLGENQLGD---------------AGVKLLSVALRNLGCTIQRLSLTNNNLTDSCAKDLSSVISTNQSLTDLDLGGNRLGDAGVKLLSVAL 982 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig622.17060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig622.17060.1 >prot_F-serratus_M_contig622.17060.1 ID=prot_F-serratus_M_contig622.17060.1|Name=mRNA_F-serratus_M_contig622.17060.1|organism=Fucus serratus male|type=polypeptide|length=1598bp MVRYLVQFLFAAVESNDGVIRSFSQAKEVHYATLDSLALFPKDAVWLEKRback to top mRNA from alignment at F-serratus_M_contig622:345471..360341- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig622.17060.1 ID=mRNA_F-serratus_M_contig622.17060.1|Name=mRNA_F-serratus_M_contig622.17060.1|organism=Fucus serratus male|type=mRNA|length=14871bp|location=Sequence derived from alignment at F-serratus_M_contig622:345471..360341- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig622:345471..360341- >mRNA_F-serratus_M_contig622.17060.1 ID=mRNA_F-serratus_M_contig622.17060.1|Name=mRNA_F-serratus_M_contig622.17060.1|organism=Fucus serratus male|type=CDS|length=9588bp|location=Sequence derived from alignment at F-serratus_M_contig622:345471..360341- (Fucus serratus male)back to top |