prot_F-serratus_M_contig622.17055.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig622.17055.1
Unique Nameprot_F-serratus_M_contig622.17055.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length532
Homology
BLAST of mRNA_F-serratus_M_contig622.17055.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 7.030e-125
Identity = 233/530 (43.96%), Postives = 284/530 (53.58%), Query Frame = 0
Query:   98 VKKAVELWSQDSLELHRFHDKRVHVCDAKTLPEVLSQFWRLVAKCAQAKFSAMTDDRDYAAHVLFVVHQCDLLKDYGMMRQLD--------------------------------KVLDFCSGGCRDFGRTVTLQHYHPNFSLPPSQGHSDGRH-----DSKDLARVVNFSRSPYPVFGLTVAGGNAARSDPISASDRISRLRVDLEMVYNSVAGCSTDDSIDAHGSEHGTIPSSPQEVEKKTLGWLKKNSEDIRGRTSRESEVLPDCGRFLDGA------------------------------------KDDVVTSDLSTPEEVLSQIWSIVKQLQVETAP-----------------------------------------ILSAKEVSDSTTTAMVGVRKASSASGIPDGGAGEG--------GNNQREPLASKLLVAPRLHPFNSAQFESFVSNLAIALKQTPIMDRFEVEVYHPEYVFDGGVVDLIRRSPYPTLFIKHCGLKDELFRPSGLYRHTVPPLKLPSE 505
            +K+AVE W+++SL+L RF  KRVH+C A+TLPEVLS+FW L A  AQ K+SAM  D DYAAH LFV  +C LLK+Y MMR LD                                KVLDFCSGGC DFGRTVTLQHYHP+F LPPSQ  S         ++K L+R VNFSR+PYP FGLT A G+  RS+PI  +D+I  LR+DLE+VYNSVAG STDD +D+ G   G IPSS +EV+ KTL WL      +R         + + G   D A                                    +  +VTS L++PE++  +    +   + E AP                                           +A E      T +    KA +   + D   GEG        G   ++ LAS LLVAPRLHPFN+AQFE+F   LAIALKQ PI+DR EVEVYHPE V DGGV+DL RRSPYPTL +KHCGLKD LF PSG YRH +PPLKLP E
Sbjct:  115 IKQAVEAWAEESLDLRRFQGKRVHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHDYAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEGAVGGVEERGAAGDEAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKLREEALPFLAAAEHEEAPPSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVEHWTKAATKL----KAGAQQDVADEDRGEGAAEAAVGAGVEAKKSLASTLLVAPRLHPFNAAQFENFARTLAIALKQAPIVDRIEVEVYHPELVCDGGVIDLDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLE 640          
BLAST of mRNA_F-serratus_M_contig622.17055.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.370e-110
Identity = 193/413 (46.73%), Postives = 233/413 (56.42%), Query Frame = 0
Query:   98 VKKAVELWSQDSLELHRFHDKRVHVCDAKTLPEVLSQFWRLVAKCAQAKFSAMTDDRDYAAHVLFVVHQCDLLKDYGMMRQLDKVLDFCSGGCRDFGRTVTLQHYHPNFSLPPSQGHSDGRH-----DSKDLARVVNFSRSPYPVFGLTVAGGNAARSDPISASDRISRLRVDLEMVYNSVAGCSTDDSIDAHGSEHGTIPSSPQEVEKKTLGWLKKNSEDIRGRTSRESEVLPDCGRFLDGAKDDVVTSDLSTPEEVLSQIWSIVKQLQVETAPILSAKEVSDSTTTAMVGVRKASSASGIPDGGAGEGGNNQREPLASKLLVAPRLHPFNSAQFESFVSNLAIALKQTPIMDRFEVEVYHPEYVFDGGVVDLIRRSPYPTLFIKHCGLKDELFRPSGLYRHTVPPLKLPSE 505
            +K+AVE W+ +SL+L RF  KRVH+C A+TLPEVLS+FW L +  AQ K+SAM  DRDYAAH LFV  +C LLKDY MMR LDKVLDFCSGGC DFGRTVTLQHYHP+F LPPSQ  S         ++K L+R VNFSR+PYP FGLT A G+  RS+PI  +D+I  LR+DLE+VYNSVAG STDD +D+HGS HGTIPSSP+EV+ K L WL                + P      +GA+  V     +  E V                           +T A+V                                              S+   L  +   +P       +VYHPE V DGGV+D+ RRSPYPTL +KHCGLKD LF PSG YRH +PPLKLP E
Sbjct:  127 IKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWL--------------YSLPPALQAGQEGAEGSVEERGAAGDEAV---------------------------STAAIVNXXX-------------------XXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSP------EKVYHPELVCDGGVIDIDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLE 473          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig622.17055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGJ1_9PHAE7.030e-12543.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0L3_ECTSI1.370e-11046.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009858Protein of unknown function DUF1415PFAMPF07209DUF1415coord: 406..477
e-value: 1.3E-6
score: 28.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..531
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.649
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig622contigF-serratus_M_contig622:130051..147981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig622.17055.1mRNA_F-serratus_M_contig622.17055.1Fucus serratus malemRNAF-serratus_M_contig622 127329..148214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig622.17055.1 ID=prot_F-serratus_M_contig622.17055.1|Name=mRNA_F-serratus_M_contig622.17055.1|organism=Fucus serratus male|type=polypeptide|length=532bp
MRMKSRVGLALGLVASSACINGTVAFQQQPRWKTSSPGSFFKFSSTAPVF
ARQLLSQRTPIPGCEGRKNDGIGELRASAADASSAPLNEKRKGRKASVKK
AVELWSQDSLELHRFHDKRVHVCDAKTLPEVLSQFWRLVAKCAQAKFSAM
TDDRDYAAHVLFVVHQCDLLKDYGMMRQLDKVLDFCSGGCRDFGRTVTLQ
HYHPNFSLPPSQGHSDGRHDSKDLARVVNFSRSPYPVFGLTVAGGNAARS
DPISASDRISRLRVDLEMVYNSVAGCSTDDSIDAHGSEHGTIPSSPQEVE
KKTLGWLKKNSEDIRGRTSRESEVLPDCGRFLDGAKDDVVTSDLSTPEEV
LSQIWSIVKQLQVETAPILSAKEVSDSTTTAMVGVRKASSASGIPDGGAG
EGGNNQREPLASKLLVAPRLHPFNSAQFESFVSNLAIALKQTPIMDRFEV
EVYHPEYVFDGGVVDLIRRSPYPTLFIKHCGLKDELFRPSGLYRHTVPPL
KLPSETVAPSEHDADESSLKDSTPENSPSST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009858DUF1415