prot_F-serratus_M_contig1008.173.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1008.173.1
Unique Nameprot_F-serratus_M_contig1008.173.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length108
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1008.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 58..108
e-value: 3.2E-8
score: 33.3
IPR023575Ribosomal protein S19, superfamilyGENE3D3.30.860.20coord: 37..108
e-value: 1.7E-8
score: 36.2
IPR023575Ribosomal protein S19, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 58..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..108
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1008contigF-serratus_M_contig1008:64505..64828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1008.173.1mRNA_F-serratus_M_contig1008.173.1Fucus serratus malemRNAF-serratus_M_contig1008 64505..64828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1008.173.1 ID=prot_F-serratus_M_contig1008.173.1|Name=mRNA_F-serratus_M_contig1008.173.1|organism=Fucus serratus male|type=polypeptide|length=108bp
AKETHLPHVHITRGRSRQAARPLHGGVHINPPRTLSVPNVLRAIAQARVS
YQSPVEGKEESGTQKEPKDMKMHPFNMLIVLEMVGFIVGICNGKLMNDRK
ITPKKVNH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR023575Ribosomal_S19_SF