mRNA_F-serratus_M_contig1211.1668.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1211.1668.1
Unique NamemRNA_F-serratus_M_contig1211.1668.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: A0A6H5JEA3_9PHAE (GOLD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.390e-24
Identity = 75/202 (37.13%), Postives = 112/202 (55.45%), Query Frame = 2 
Query:  416 KRCFMVTVGRPLEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPK------PFKVREITPGKGYLGFNTKNAGKYSLCAVYN--TINSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            +RCF+V+         +   +SFHV +      +     KV+LEL TL  + + +PK      P   R+I   +G   F  K A  + LCAV +  T      ++L+LD++ G  +  +  ++   +L D QI +++L++ A+ ML +AD  K  E  YH  LL+LN E   WPV QV+IL+A G+YQVRHLK FFK+KRLV
Sbjct:  127 RRCFVVS---------EAPGTSFHVHHYFPQAED---GHKVTLELRTL--SEDSSPKDRFLQEPLVTRDIEDKRGSHQFKLKVAEDHLLCAVTSSETKKKGRGLKLYLDLDTGLEDKHYKDVQRRFNLGDAQITMIQLKNEAQQMLREADQSKESETEYHKLLLQLNHEVLWWPVSQVVILMAMGYYQVRHLKSFFKSKRLV 314
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: A0A7S3HUI1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HUI1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.110e-14
Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  494 YDLRDKGEKPGAAKVSLELSTLPGTANRNPKPFKVREITPGKGYLGFNTKNAGKYSLCAVYNTINSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            Y + DKG     A+V  +L    G      +    +  T   G++ F   N G YS C        +  V+  + +  G     ++K+      D + + V KL     L LN+AD+ K+ E+ YH    ++N     WPV+Q++IL+ AG YQV+HLK FFK  +L+
Sbjct:   46 YQMLDKG-----AEVGFDLYY--GALATQDQQIMHKVFTEPSGHIDFVADNDGFYSYCLQLPPTAGEPAVRFEMVLNYGFDSDYYEKLAKKYDYDAVNLQVHKLNDMLTLTLNEADYQKHKEVEYHDVTEKMNNATLWWPVLQIIILILAGVYQVQHLKAFFKQNKLI 206
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: A0A8J4PV69_9MYCE (GOLD domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PV69_9MYCE)

HSP 1 Score: 80.1 bits (196), Expect = 1.560e-13
Identity = 52/187 (27.81%), Postives = 90/187 (48.13%), Query Frame = 2 
Query:  449 LEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPKPFKVREITPG-KGYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            +EEN K   +     Y L D     G     L L+       ++P+  ++   T G  G   F T+  G++ +C   NT        + +L LD+E G S  ++++I   E L  M+IA+ +L      +  +  + K  EI++  +    N     W ++Q+++L+  G +Q++HLK FFKAK+LV
Sbjct:   35 IEENPK--DTMLLGKYVLEDMNPPNGQVNTQLALTVRV----QDPEKRELLSKTMGASGRFAFTTQMGGEHKICFSTNTSKWFGPSVKTRLHLDIEAGASANDYEEIAKLEQLSSMEIAIRRLNDRINQIRKEQSYQKGREIVFRNTSESTNARVMWWSILQLIVLVLTGVWQMKHLKSFFKAKKLV 215
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: F4Q5Q2_CAVFA (Emp24/gp25L/p24 family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q5Q2_CAVFA)

HSP 1 Score: 78.2 bits (191), Expect = 6.140e-13
Identity = 43/144 (29.86%), Postives = 77/144 (53.47%), Query Frame = 2 
Query:  578 NPKPFKVREITPGK-GYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            +P+  +V   T G  G   F T   G+Y +C   N         + +L LD++VG +  ++++I   E L++++I+V +L      +  +  + K  E+++  +    N     W V+Q++IL+  G +Q+RHLK FFKAK+LV
Sbjct:   64 DPEKREVLSKTMGSTGRFAFQTAMGGEYKICVSTNPSKWFGPQVKTRLHLDIQVGANANDYEEIAKVEHLNNLEISVKRLNDRVTQIRKEQSYQKGREVVFRNTSESTNSRVMWWSVLQLIILVLTGMWQMRHLKSFFKAKKLV 207
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: D3BFU7_POLPP (Emp24/gp25L/p24 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BFU7_POLPP)

HSP 1 Score: 75.5 bits (184), Expect = 6.200e-12
Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:  449 LEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPKPFKVREITPG-KGYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            +EEN K   +    +Y L D   + G +   L LS +      +P+  +V     G  G   F T   G+Y +C   N+        + +L LD++VG +  ++++I   E L++++I+V +L      +  +  + K  EI +  +    N     W ++QV++L   G +Q+RHLK FFKAK+LV
Sbjct:   37 IEENPK--DTLLVGNYVLEDLNPQAGIS-TPLALSVIV----TDPENHEVLSKQMGASGRFAFQTLIGGEYKICISTNSSKWFGPTIKTRLHLDIQVGANANDYEEIAKVEQLNNLEISVKRLNDRVTQVRKEQSYQKAREITFRNTSESTNSRVMWWAILQVVVLCLTGMWQMRHLKSFFKAKKLV 216
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: UPI000644F16F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F16F)

HSP 1 Score: 73.9 bits (180), Expect = 2.060e-11
Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:  449 LEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPKPFKVREITPG-KGYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            LEEN K   +    +Y L D   + G     L L T+  T   +P+  +V     G  G   F T   G+Y +C   N+        + +L  D+ VG +  ++++I  A+ L+ ++IA+ +L      +  +  + K  E+ +  +    N   T W V+Q+++L+  G +Q+RHLK FF+AK+LV
Sbjct:   35 LEENPK--DTLLVGNYVLEDLNPQNGMPNSQLAL-TIKIT---DPENHEVMNKHMGASGRFAFQTLMGGEYKVCVSTNSSKWFGPSIKTRLHFDILVGANANDYEEIAKADHLNQLEIALKRLNDRVTQIRKEQSYQKAREMTFRNTSESTNNRVTWWAVLQLVVLVLTGLWQMRHLKSFFRAKKLV 215
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: A0A152AAK2_9MYCE (Emp24/gp25L/p24 family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AAK2_9MYCE)

HSP 1 Score: 73.2 bits (178), Expect = 3.720e-11
Identity = 45/160 (28.12%), Postives = 74/160 (46.25%), Query Frame = 2 
Query:  560 PGTANRNPKPFKVREITPGK-----------GYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            P T   N     VR   P K           G   F T+  G++ +C   NT        + +L LD+E G    +++ I   E L+ M+I++ +L      +  +  + +  E  +  +    N     W ++QV++L+A G +Q+RHLK FFKAK+LV
Sbjct:   55 PPTGQPNQLALSVRVTDPEKKELLSKTMGTIGRFSFTTQIGGEHKICFSTNTSRWFGPSVKTRLHLDLETGAGANDYEDIAKVEQLNSMEISIRRLNDRVNQIRKEQSYQRGREQTFRNTSESTNSRVMWWSLLQVVVLVATGVWQMRHLKSFFKAKKLV 214
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: UPI0006B10A13 (transmembrane emp24 domain-containing protein eca-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B10A13)

HSP 1 Score: 73.2 bits (178), Expect = 4.370e-11
Identity = 50/211 (23.70%), Postives = 102/211 (48.34%), Query Frame = 2 
Query:  374 YFYLTKETKNDQKNKRCFMVTVGRPLEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPKP-FKVREITPGKGYLGFNTKNAGKYSLCAVYNTIN--SDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            YF++T      +  ++CF+  +    +E   +G       YD +  G  P +  + + +        R+P     + ++   +G+  F +   G++ +C   NT    S  ++++ LD++VG    ++  +   E L ++Q+ V +L   A+ +  + ++ +  E  + G+    N+    W + Q  ILL  GF+Q++HLK FF+AK+LV
Sbjct:   29 YFHIT------ETERKCFIEEIP---DETMVVGNYKCQF-YDPKTGGFMPSSPGIGMHVEV------RDPDDKVMLSKVYSTEGHFTFTSHIPGEHVICLYSNTTKWFSGSQLRVHLDIQVGEHAVDYGNVAQKEKLTELQLRVRQLLDQAEQITKEQNYQRYREERFRGTSESTNQRVLWWSITQTFILLVMGFWQMKHLKSFFEAKKLV 223
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: Q769F7_DICDI (Emp24/gp25L/p24 family protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q769F7_DICDI)

HSP 1 Score: 72.4 bits (176), Expect = 6.840e-11
Identity = 36/137 (26.28%), Postives = 72/137 (52.55%), Query Frame = 2 
Query:  596 VREITPGKGYLGFNTKNAGKYSLCAVYNT---INSDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            + +  P  G   F+T+  G++ +C   NT        + +L L++E G    ++++I   E L  ++I++ +L      +  +  + K  EI++  +    N     W ++Q+++L+  G +Q++HLK FFKAK+LV
Sbjct:   78 LSKTMPSNGRFAFSTQVGGEHKICFSTNTSKWFGPSVKTRLHLEIEGGAGANDYEEIAKVEHLTGIEISLRRLNDRVNQIRKEQSYQKGREIVFRNTSESTNARVMWWSIIQLVVLVLTGVWQMKHLKSFFKAKKLV 214
[Close]
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Match: UPI001B88A056 (transmembrane emp24 domain-containing protein eca-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A056)

HSP 1 Score: 72.0 bits (175), Expect = 9.430e-11
Identity = 53/211 (25.12%), Postives = 105/211 (49.76%), Query Frame = 2 
Query:  374 YFYLTKETKNDQKNKRCFMVTVGRPLEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELSTLPGTANRNPKPFKVREIT-PGKGYLGFNTKNAGKYSLCAVYNTIN--SDDRVQLFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNMEILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV 997
            YF+++      +  K+CF+  +    +E   +G       YD + K   P A  + + +        ++P    V   T   +G   F + +AG++S+C   N+    S  ++++ LD++VG    ++ +I+A + L ++Q+ V +L    + +  + ++ +  E  +  +    N+    W + Q +ILL  GF+Q+RHLK FF+AK+LV
Sbjct:   21 YFHIS------ETEKKCFIEEIP---DETMVVGNYKVQA-YDTKVKDYLPVAPGIGMLVEI------KDPDDKIVLSRTYAAEGRFTFTSHSAGEHSVCLHSNSTAWFSGGQLRVHLDIQVGEHAVDYQQIQAKDKLSELQLRVRQLLDQVEQITKEQNYQRYREERFRSTSESTNQRVLWWSIAQTVILLITGFWQMRHLKSFFEAKKLV 215
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1211.1668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEA3_9PHAE5.390e-2437.13GOLD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3HUI1_9STRA1.110e-1430.36Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J4PV69_9MYCE1.560e-1327.81GOLD domain-containing protein n=1 Tax=Polysphondy... [more]
F4Q5Q2_CAVFA6.140e-1329.86Emp24/gp25L/p24 family protein n=1 Tax=Cavenderia ... [more]
D3BFU7_POLPP6.200e-1228.34Emp24/gp25L/p24 family protein n=1 Tax=Polysphondy... [more]
UPI000644F16F2.060e-1128.34hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A152AAK2_9MYCE3.720e-1128.13Emp24/gp25L/p24 family protein n=1 Tax=Tieghemoste... [more]
UPI0006B10A134.370e-1123.70transmembrane emp24 domain-containing protein eca-... [more]
Q769F7_DICDI6.840e-1126.28Emp24/gp25L/p24 family protein n=1 Tax=Dictyosteli... [more]
UPI001B88A0569.430e-1125.12transmembrane emp24 domain-containing protein eca-... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1211contigF-serratus_M_contig1211:134512..153220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.3
Seed ortholog evalue7.2e-13
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.6976
Preferred nameTMED4
KEGG koko:K20346,ko:K20352
KEGG TC9.B.188
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0000149,GO:0002790,GO:0003002,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0006621,GO:0006810,GO:0006888,GO:0006890,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007030,GO:0007154,GO:0007267,GO:0007275,GO:0007389,GO:0007444,GO:0008104,GO:0008150,GO:0009306,GO:0009888,GO:0009953,GO:0009987,GO:0010256,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0019905,GO:0023052,GO:0023061,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030140,GO:0031090,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032507,GO:0032940,GO:0033036,GO:0033043,GO:0033116,GO:0033365,GO:0034389,GO:0034613,GO:0035220,GO:0035295,GO:0035437,GO:0035964,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045185,GO:0046662,GO:0046903,GO:0046907,GO:0048042,GO:0048193,GO:0048194,GO:0048199,GO:0048200,GO:0048205,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050795,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0060429,GO:0061024,GO:0061355,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071840,GO:0072595,GO:0097708,GO:0098588,GO:0098791,GO:0098827,GO:0198738,GO:2000241
EggNOG free text desc.emp24/gp25L/p24 family/GOLD
EggNOG OGs3QE29@4776,KOG1690@1,KOG1690@2759
Ec32 ortholog descriptionGOLD
Ec32 orthologEc-15_000790.1
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04131
Exons8
Model size1497
Cds size744
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1211.1668.1prot_F-serratus_M_contig1211.1668.1Fucus serratus malepolypeptideF-serratus_M_contig1211 135009..148903 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929133.3123827-UTR-F-serratus_M_contig1211:134511..1350081622929133.3123827-UTR-F-serratus_M_contig1211:134511..135008Fucus serratus maleUTRF-serratus_M_contig1211 134512..135008 -
1690962717.942734-UTR-F-serratus_M_contig1211:134511..1350081690962717.942734-UTR-F-serratus_M_contig1211:134511..135008Fucus serratus maleUTRF-serratus_M_contig1211 134512..135008 -
1622929133.4930165-UTR-F-serratus_M_contig1211:148903..1490821622929133.4930165-UTR-F-serratus_M_contig1211:148903..149082Fucus serratus maleUTRF-serratus_M_contig1211 148904..149082 -
1690962718.0164545-UTR-F-serratus_M_contig1211:148903..1490821690962718.0164545-UTR-F-serratus_M_contig1211:148903..149082Fucus serratus maleUTRF-serratus_M_contig1211 148904..149082 -
1622929133.5070088-UTR-F-serratus_M_contig1211:153143..1532201622929133.5070088-UTR-F-serratus_M_contig1211:153143..153220Fucus serratus maleUTRF-serratus_M_contig1211 153144..153220 -
1690962718.0235307-UTR-F-serratus_M_contig1211:153143..1532201690962718.0235307-UTR-F-serratus_M_contig1211:153143..153220Fucus serratus maleUTRF-serratus_M_contig1211 153144..153220 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929133.3877537-CDS-F-serratus_M_contig1211:135008..1350861622929133.3877537-CDS-F-serratus_M_contig1211:135008..135086Fucus serratus maleCDSF-serratus_M_contig1211 135009..135086 -
1690962717.9526644-CDS-F-serratus_M_contig1211:135008..1350861690962717.9526644-CDS-F-serratus_M_contig1211:135008..135086Fucus serratus maleCDSF-serratus_M_contig1211 135009..135086 -
1622929133.4083364-CDS-F-serratus_M_contig1211:135699..1358251622929133.4083364-CDS-F-serratus_M_contig1211:135699..135825Fucus serratus maleCDSF-serratus_M_contig1211 135700..135825 -
1690962717.9616718-CDS-F-serratus_M_contig1211:135699..1358251690962717.9616718-CDS-F-serratus_M_contig1211:135699..135825Fucus serratus maleCDSF-serratus_M_contig1211 135700..135825 -
1622929133.4232097-CDS-F-serratus_M_contig1211:136942..1370351622929133.4232097-CDS-F-serratus_M_contig1211:136942..137035Fucus serratus maleCDSF-serratus_M_contig1211 136943..137035 -
1690962717.970784-CDS-F-serratus_M_contig1211:136942..1370351690962717.970784-CDS-F-serratus_M_contig1211:136942..137035Fucus serratus maleCDSF-serratus_M_contig1211 136943..137035 -
1622929133.4375923-CDS-F-serratus_M_contig1211:140368..1404521622929133.4375923-CDS-F-serratus_M_contig1211:140368..140452Fucus serratus maleCDSF-serratus_M_contig1211 140369..140452 -
1690962717.9794106-CDS-F-serratus_M_contig1211:140368..1404521690962717.9794106-CDS-F-serratus_M_contig1211:140368..140452Fucus serratus maleCDSF-serratus_M_contig1211 140369..140452 -
1622929133.4566941-CDS-F-serratus_M_contig1211:143126..1432101622929133.4566941-CDS-F-serratus_M_contig1211:143126..143210Fucus serratus maleCDSF-serratus_M_contig1211 143127..143210 -
1690962717.9880533-CDS-F-serratus_M_contig1211:143126..1432101690962717.9880533-CDS-F-serratus_M_contig1211:143126..143210Fucus serratus maleCDSF-serratus_M_contig1211 143127..143210 -
1622929133.4704173-CDS-F-serratus_M_contig1211:145471..1456121622929133.4704173-CDS-F-serratus_M_contig1211:145471..145612Fucus serratus maleCDSF-serratus_M_contig1211 145472..145612 -
1690962717.996731-CDS-F-serratus_M_contig1211:145471..1456121690962717.996731-CDS-F-serratus_M_contig1211:145471..145612Fucus serratus maleCDSF-serratus_M_contig1211 145472..145612 -
1622929133.4822206-CDS-F-serratus_M_contig1211:148765..1489031622929133.4822206-CDS-F-serratus_M_contig1211:148765..148903Fucus serratus maleCDSF-serratus_M_contig1211 148766..148903 -
1690962718.0053773-CDS-F-serratus_M_contig1211:148765..1489031690962718.0053773-CDS-F-serratus_M_contig1211:148765..148903Fucus serratus maleCDSF-serratus_M_contig1211 148766..148903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1211.1668.1

>prot_F-serratus_M_contig1211.1668.1 ID=prot_F-serratus_M_contig1211.1668.1|Name=mRNA_F-serratus_M_contig1211.1668.1|organism=Fucus serratus male|type=polypeptide|length=248bp
MTMLRLLKRVSFIGTLLCATLVFPQRSLADEDEEPMQQPYFYLTKETKND
QKNKRCFMVTVGRPLEENGKLGPSSFHVDYDLRDKGEKPGAAKVSLELST
LPGTANRNPKPFKVREITPGKGYLGFNTKNAGKYSLCAVYNTINSDDRVQ
LFLDVEVGPSEGEFDKIKAAESLDDMQIAVVKLRSTAKLMLNKADFIKNM
EILYHGSLLRLNREATEWPVVQVLILLAAGFYQVRHLKQFFKAKRLV*
back to top

mRNA from alignment at F-serratus_M_contig1211:134512..153220-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1211.1668.1 ID=mRNA_F-serratus_M_contig1211.1668.1|Name=mRNA_F-serratus_M_contig1211.1668.1|organism=Fucus serratus male|type=mRNA|length=18709bp|location=Sequence derived from alignment at F-serratus_M_contig1211:134512..153220- (Fucus serratus male)
CTCGGTTCCATCGGACAATCCCGGGGGCCGAAATAGCTGCGAAGTCGATA
AGAAGGTTTCCTTCGTGCACGTGAAAGGTGAGGGCTTTGTCAAGCTTAAG
CTGTGCTCCCGTGTGAAAAGTTGAGTCGGATAAATTTTTTTGCAAGAGAC
CTTCATTGATGCTTCTTTCCACCAACATTGGGTAACTTGTACAAGATGAG
ATGCTGTGCGAGGTACGAACAGTTGCAGCACTTGTACTACCTATACATAA
TCTACAGAAAACTCAAGCCCAGCCGTCGGGACGATCGCGCGATTTATGGC
GGAAAATGCCCCCCCGATCGTACGAGATTCTTCCGTCGAGCTGTTTCGTT
GCGCAAGTTAAATGGCACACATCGCTCAAAAGGTTTTCAGACGACAGCTG
ACCAAAAAATAAAGTCTCCGGTGCGGTACTGGGGTGACCGGCTTGTCAAA
GGAAAGCATACGTACCTCAGAGACCAAGCCTGCCGTATAGGCTAGCGCAG
AGATGGCACAGATTCTCGACAGTGGGTTCGTCTTACGATTGAGCTTTATT
GTAACGCGCTACAGTAGTAGGTCTCAAAAAGTTATACGCATGACCTCGTA
CAACCGTGCCCTTGAGATAAACCGGTGCGAGAGCATTGAGATAACGTTGC
GCACAAGAAAACTTTTGTGGGCGGGAACGCTCATCCGAATGAGGCGGCGG
GCGGCTGCCAAAGCCAATCATGCTCGGAAACCTCGAGGGTGCATTGCGGA
GAGGACGGGGTGGGAAGGAGAAAGAGCGGACCGATTGTGTACAGAGCGAC
ATCCGGGCGTTTGACATAACCGGGAATTGGGAAGCGATGGCGTTAAAGGC
TGAGGTACGGGTTGAGGCGGTCACGGAGGATGAGCGGAGGTTCATGGCCG
CGTAGAGGAAAGAAGAGGCAGACACGGGCAGACATTGTCAGGAGAAGAGA
GAGGCAACGAGACTGGGAAAGTTGTTATCGCACACGGAAGCGTACAATTT
TGCGAAGCGACACCCATTGACCTAGCCGACGAGTCGAAGGAATACTTGTA
CGGACGCGGGACGGACCGAGAGCATGCTGACCTGCGTATGTCCTAGCGCC
TAGACATGTAGATGCGTCACGTGATTTTTATTTTATTTTCTCCGAACGAG
CAGCGTGGGGGGGAGAGGTGCGCTGCCCGATTACGGTACACACTGATCTA
CTGCCAGGTACAGATAAAGCAAGGTGTGTGACGAAGGCCTGACTCTGAAC
CTACGATCTGCGGTGTTTGCGACATCGGAAGCCTTCCAGTTGTACGGGCG
TAAAGAACACATTCGACGCATCTAAATCTTCTGATCATCCCCAGTCAGGG
GGGGGGCGGGGGGCTGTCAAAACGTTTAGGTGGGAACACAGGCTGCAAGG
ACAAAAGCTTTTGAAGGGATTCAATCGGGTTCCAGCTAAGGAACTCTGAT
TCAAACTTGTGCAGCAGTGGCGGCCAGAGCCTTGCGGCTTTGAAGGTAGT
AAAAAGTATGCCAAAGCAGCAGCAACCACTCTGGAGCCTCGCTATGAGAC
CCTGCGGCGGCGTAGATATAGAAAGCAGGCATTGCTCGTGATGTTATCGC
CGAGAAAAAAAGCAAGCGAAGCTTCGTGGGTGTTTTTTGTGGCGATGAGG
GCTTTCCCTCTTTTTTTTTACGTTTTGGGAGGGAAGGAGTTCGACTTTAC
TAGAAGAACGTGTTCCGCTCGAGCATGGACCTGGCAGGACGGCTGCAGTT
CATGCCGACTCTAACATGCTGTTTTTGTCCGGACTGCGATTAGACCATTT
GCTTCTTCGAGCACTTCGGTTCTCGACAAGACGCGCGTGTCTCGCCCCTG
CCCCTGAGATATTTATCCTCTCTCCGCGCTGAGCGAAAAGCCTTCCATCT
CCCGATAACTCCGGAAACGCGACGTGCGACGCACCCACAGTGCATTGAAT
TTCCTTGTGTGCGCGGAAGACCGACCGACCCAGACAGCGCCCAGAGTTCA
CGTTGTTGATATTGACCATTGTTTTCATTCATTGTCGCAGCAGACTGGAC
ATCGGCCGGTATGGTTGCCAATTATGTTTGTGGTCAGCTGAACAGGGGAA
ATGAACTCTCCCTTTCCTCGTTACCCCCTGAGAATTTGAGCTGACGAGAC
TGCCAACCCATCCCCGCGCAAGTGCTTTTATCCTCCACGCTCAATCTGAA
TTTGATTTTTACTCGCGGGCTACTCGCCTTTCTCACGCTTTCCACGCCGA
TTTTAGTAGAAATTGAAGTAGTGCCTTGGATTCCTGAAAATACGCTCCTG
TACTCCAAAAAAAACTTGATACCCACAGAGAATATAAATACTGATCTCTG
CAATTCTAAACGACTTTTTGGTGACACTGCATGAGATGGCCCTTCAGGAC
AACATAGTTGTTCCAAGGCACTGGAATGGCAGTGATTTTGAAGTGTGATG
AAGCTTTTCTCATAATCTCAATGGTGGTTAACGGGGTTCACACCGTGGCG
AAGTAGAGGAAACGGAGATGGATATCCCCCCCACCTATTTTGTAGGCATT
TCGTAAAAAATGTATTTCGATCAGTTGGTACGGTGTCGGAATTTATAGTA
TGTTTTTGTCGAAATTCGCGTTTACCGATCTAAAAAATCCCAACACCCCC
ATCTTATGGAGTCGGAAATCGACTCGAAAACAAAAAGCACGATTTGGGGT
AGTCGAAAACCTGTGCGCTGAAGGCTGGAAGGCTTTCTCTACGGAGTGCT
TTTTTTGTTGACGTGGCTACAGAGTAGTACAGTTACATCGGCCGCTAGAC
CTAAACAAGCAAGCTGTCAAGATAAAATAGAGTATAGCTTGTATAGTCTA
CAGAGTATCGGGAGCAAAAGAGTACGAGACCTAGGCGGATAATAATGGGA
TGAAGGCTGATCGTACTGAGGGTGGCCACCCGGCGACTCGACGGGTTTGA
TTTATTTGCCGCTGCTTTCGTTGTGTACGACAAAATAGCGATGGTCTCAA
GCGGACAGAGAGTAGAGGAGTGAAGTCGAACGTGTTGGTGCTATTAATGT
CGATGCTAGGCAATGGTGTTGGCGGCGGGGGCGGTGAATCTCGTGACCAC
CGCGCCGGGGACGGCATCGCGCCCGTCTTAACTACAAATTCTAGGTATCC
ATAGCTCCGTTGGGGTAATAGAGTGACGCGGGGGCTCTTTTCCTTCCAGC
GACCCATACGGCTCTTGCTTGATTTCGCGTCGCGTATCTTTGTCCTTCGC
GGACCTTGTGGGAAGCTCATTGTGGCGCTTATTCAGGGTAAATAGATGGG
GAGGAGGATGATGTATCCCTTTGGAGCTGAAGATCTGTGGTCTACTGCGG
TTGTGATGCGCTTCAATGTTCCTGGTTCAGTGGAAGCGCTGTTGTTGTGG
CATCCCATCGCATTTTTGAAGATATCAGCTGCTGCATTTGTACTATGGCA
TGTATTAATACATGTACAACACAACAGCGGTAACAATTTTTACAGCCCCA
GTACATTGTACTGTAGTTAGTAATAGTAATAGTTACTTTGGCTACAACCG
TGTGCTGGTACTGAACTCGCACCCCCAAAAAAGGGCAGTGCGCACAGACG
GAATAACAAGGCCTCGCGAAGCGCAATAATACCAACTATTAATAAAAAGT
GAAGAAGGAAAAAACGATTATTACACCTGTAGGGTGAGAGCTTGGTCAGA
TTTTGAGCCCCCAGATGTTGGTCGGAAATCGAACAGACTCCCGACAGTAA
ATAACGATTTCCGAAAAAAAAAAGAAACATTGTGTGGGGGGAAAAAAAAA
AGTTTTATAGCATAGGCCGGGGAATGCATTGAAAATCGCGTTCTGGTGGG
AACCCCCCTCCCCCCACCACCAGCTATTTTATCTCATTGTAGAAAAGAGT
GTTGTTATTATACTATTATATATATGCAGGAAATCGGCAGGGGTCACCGC
GAACCACACCCCCGTGCTGAGGCATTATCCCTTCAAACCTACGCAATAAT
GTTACCTGGTTCTTGTTAGCGGGTCTACTATTTGTCGTCAGCTGAAGGGT
GGTATTTTGTTGGCGGGGGGGGGAGGGGTTGAAACACACGAGCTAAAAAC
GCTTCCTATTTTGTTGGACTTTTTTCGTTTTTTGACAGGGCGAAAACAGC
TGCTGCACGCGGCGTAAAACAGGAAAAGCTTGCCACCGACGGTCAACGCG
CGGGACGCGAATAACGCCTCTTCAAACAGGGAGGGGACTCTTCGTATTAC
CCCCGAAGGAGGAGATCTCGACGCGCGTGCGGGGCAGGAGGCCACAGCGC
CCGTGCCTTCGGCGGATATGACGATGCTGAGGTTGCTGAAGAGGGTGTCC
TTCATCGGAACGCTGCTGTGTGCCACCCTGGTGTTTCCTCAACGATCATT
GGCCGACGAGGACGAGGAGCCGATGCAACAACCCTACTTTTATTTGACCA
AAGAGGTGAGGGATGCCGTGTAACGGCTCAATAGGGGGGAGGGAACCCCC
ACCCCCCCACCCACCCCCCCAGCCTACTCCCAATGAAAATACATGTATAT
ACTTATATACATATCGTCAAAATCCCCCCCAAGACAAACAACTCCTGTGC
TCATTATACACTGAAAATAGTAGTTGTTGTTTAGATCGGCGGGCACAGTG
TGAGTTCGTACCGTCTGGGAGAAGCCCCCGATAAGAACGGTACAAAAAAT
TAAGCGAGCCCCCCTTGGGCATGCTTGGCCGCACTCCCCGAGATAAGTCG
ATACGAACAAAAGCGGGGTAGATGGTGCTGCGTCTGTGCTCGAGTAGCGC
TCATTGTGGAAAGCGCTCGCAGTCGGCATGTTCCACCGTGGAAATTCGTA
GTTGTTGGGAGGGGGGGGTGAGAAGGAAGTGGGAGTTCGTAGTTATTAGG
AGGGGGATGGGAAGCAAGTGGGAGTTCGTAGTCATTGGGAGGGGACGGGA
AGGAAGTGGGATTTCGTAGTTATTGGGAGGCGGGGGGTCAAAAAGAAGTG
GGAGTTCGTAATTATTTGGAGGGGGGGTGAGAAGGAAGTGAAAGTTCGTA
GTTATTGGGAGGAGGGGGGTGAAAAGGAAGTGGGGATGCCAACACGATCG
CCTCCCGCGCGACAAGAAATAAGTCGTTGTTGGCCATGAGATAGGCTTTT
TTTAGCCCTTTTTAAAGCCTTTTTCGCTAGATTTCGCACAACCCTCCCCC
CACCTCTCGAATTCGTATTTGTGGTGGATCACGGTCGCCCCAACGTTCCG
AAACCATATCGTCCCTGGGCTCTGTAGCAGCTGCTTTAACGTTTGTTGCT
GGTCGCTGGATTTCGTGCGTAACCATGAGTACGGGATGAAATAAAATGCA
TTCGTGAGGTTGACGGAGGTTTGTTTATACAGAGAAGGGCTGAATCTGCA
TAAATGAAAGCGCGAACCGGGGAGAGACAAGCAAAATACCCTGTGGAGGC
GAAGATGAACGGGGGGGGGGTGTCGTTGATGCAGGTTAGATTGATTATCT
GGTTTGCGTTGTGTGAGCCCATCGGCCATTGAAGAAGAACTTACGTGGCG
GGGCTTTTTGTTTTTGTTTTCATTTAACACAACACTTGACTGATGTTTCG
CAGCTGATATAGTAGGGGGGGAAAAGGGGTCATGATCGAAAACGTAACGT
GAAATAACGTTGTATGGGTTAGAGATACCGGGAGTCAGTTTCCTACTTTA
GTGTTTACTTCGTGTGCCTCGGCGCCTCCAACCCTCCACTCGATGTGATG
TTGACGAGAGACTACATTCCACGGGATCTACACGATACGAGGCCTCTACC
AAGCATGGTATGATGCAGTTTCGGGCAAGATGTGGTAGTACATAGTATCA
AAAGTATAATGCGTATGTATATATATACATCTACATAAATGTGGAATGGT
AGTACATGGTATCAAAAGTACAATACATATATATATATATACATCTACAT
GAATGTGGAATGATGTGCAGTGCTGTCACTGATATAGTCATTTTAGTGTT
GTGGTACAGCAGTACATAGGTTCCACCGCAAAACATGGGCATGGAGAAGA
TCGGAATGAGACGCGAGATCTTCCGACCTCCGCCATCGGGGACATTAGAT
TGCTTTAATAGATTAGCTTCATAAGGGATGCTGTCAAGTCTGCAGATCTC
TGTCTTGATGACACAGCTCGAGGCTCGGTGACAAAGAGTGGGTGACCCTG
GTTGGTACAGAGCAGGCCCTCCGCACGAAGACCATCACATCTCGAGACTG
TGCACAATCTAGGCTCGCCCTGCTCTTCGTTGGTGTGGAGATGCTTCGCC
TATACACCGGCTCGGTGTGGGCTCCTGCTCCTGTTGCTAGGACGGTCTGA
CGTAGCTTTCTTGTCGGCCATGGTCTACGCTATCCCCGGCCTACCTCCTA
CAAAAAAAAAAAATGCGTTCAATGTACTGAAAACTTTATTTTTTCCACTA
CGTAGCTGCAACATAAGTGTATTTGTACAGGGCATTTTATGAAGTATTTA
CATTACAATAGTACTGCAATGGGGGGGGGAGTTCTAAAAGTATTTACGTC
TTGTATGCACAGCCGGTCGCCCCGGTAGCTCAGAGGTACCTCGTAACCCT
CTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCAC
TAAAAAACTAAAAAAACTAAAAAAAAATGTCCAACGGGTGGAGAACGATT
AAGTCGTTAGTACACAAAATTCGACTTCACGATCGACGAGGGAAAGGAAT
GGCTGAATCCTTCTCGCGAAAAAAATTAAGGCACGTACCGCAGAAGGAAG
GTGGATGAAAAATCCTGTGTGACCTTCCTCCTATGTGACCCCGGCTAATA
CGTCCATTGATGTCCAGAATGGATGGGAAGAAAACAACAATAAACATGCT
TAATTATTTCCTCTCTGTTTATTTCTTGTTCATTTACTCGTTTTGTTTTA
GAGAGAGAGAGAGAGAGAGAGACTATATACTTATTTTATGTATCTACGTA
CGAGTTGTTGTTTAAAGAAAATGTGTTGTTCTTGTCTTCACATTAAAAAC
CATTCTGACCTCTATCCAGTACCTTCTTTTCTTACTCTTAAAGGAAAAGA
AACGAATTTCCGTGGTCACAGGCTAACCCAAACTAAGGTACAGAAAAAAT
AGTAAAAGAAAAGACCCAGAGAAAGTTCCCAACACTAGCCAAAAAATAAA
ATAATAATAATAACAAGTTCAGAAAAACAAGAAGCAGATGGGGGCAGGAA
AACCCCAACAAGGAAGTAGAGCCCATCGCTCCAACTCGGAAGCTGAGTCA
CAAACAATATATATATATATATGGATACCAATACAGATGCAAAACTAAAT
TTGAAGAGGAAGCTATCCCCCCTCCCCTACGAGGCCGGGGAGTGTTCATC
GTCGGGTTCCCGCCGACCAGGCCATTCCCACTCAACGCCCTGGAGCTGTA
CGAGGGCAAAAACAAAATTAAAATTAACGACGCACATCATGCAAAATAGT
ACCATATGTCCTAGTATTTATTTATTCATTCATTTATTCTGTACTGCTTT
GTCATTTTATTTTCTATTATTGCGCCCTTTGTCGCCGCCAATTCCGCCCT
CGCGCCAGACAAAGAATGACCAGAAAAATAAGAGATGTTTTATGGTAACT
GTGGGACGGCCGCTCGAGGAAAACGGCAAATTGGGTCCCAGCTCGTTCCA
CGTCGACTACGATCTGCGAGACAAAGGGGAGAAGCCGGGAGCAGCTAAGG
TGAGGAAGTGAAAAAACATCTCCAATGCTATCGTTGTGATGAAAACTGAT
CCATTACGCCCAAAGGTAGCAGCTCTCTGTGAACTCAGGGGAGCGGTGAT
AGCCATTCCCGAGCGTTTTGACAGGGGTTGGGGTGGGGGGAGGGGGGGGG
ACAGGGTTTCCTGGTGTGCCACACTTTCGAGGGGGGGAGACGTGATTTAT
CTGCTTTCCCAAGTATTTGATTGTTTAAAAGAAAATCAAGGGGGATAGGG
AATCGACCCAATCAGCCAATCAGCACAGAGCCTTAGAAGATTGAGGGGGA
GGAGACGCATAGGTGGTGATTTTTTTCACATACTTGGGAGGTGGCAGCAT
CTGTAACCTTTCAAAAAAAAACTTAGCAGCTACAGCACTCATGCCGGCAA
CAATCCGTCTAATGTTTTGTCAAGTTCCCACCGCTTTCTTAGCGGTGGTT
GCGTACAACAGGGTCCGGGGAGGTTTTGTTGGCACGCCTTATCACGGTGA
TATCTCTGGTCCGTCTTTGTCGACAAGGCTTCGGGCCCGCTAAAGCTATA
AATACATGAACTACAGCCACAAATAATGTAGGTATGGCTTCGTTTCTATG
CTGAAGGGACATGGAATAAACATGAGGGATATGTTTTACATAATCTATGC
TCCCAGAAAAATCGCCCTTTCTCTTCCTTCGTTTTCGTTTTTACTGTCCG
TATATTAAAAAATGTATACAAAATCCGCCCCCGAGGCTCTGCTGTACTCC
GATTGTCTGTCGTGTATAAACCCTTTCTCCCTTACCAGGTATGATTTTTT
TCTTTTCTTTTCAACTCTCGGTGTCTTGTTTTTGAACGATCAAAAACCGA
CGACTACCGACGACATTTTTTACTTTTCAGTGAGAAATGAGACGGAGAAG
TACCGACGACTATTTTTACTTTTCTTCTCCGTGAAATGAGACGGAGAAGT
ACCGACGACTATTTTTACTTTTCTTCTCCGTGAAATGAGACGGAGAAGTA
CCGACGACTATTTTTACTTTTCTTCTCCGTGAAATGAGACGGAGAAGTAC
CGACGACTATTTTTACTTTTCTTCTCCGTGAAATGAGACGGAGAAGAAAC
TCCTTAGCAAGAATTCGGCCCACACGACTTGGCTGCAGCTTCTTGCGTTT
ACCCGCCGAGGGCTCGTGGAATGAATGATGTGTGTCGTCTATTTCGCGAT
TTCTTCGCCTTTCCGGATGCGTCACCGCCCCGGGCGAACTTGGAGTGCTG
GGTATATATTTACTTAGTATATTATTGCGAGCGTTTAGCGAGCTTCTAAT
CTGACAGCTGTATCAATTTGAGCTCGGGTGTATAAAATATGTTCCTTTTC
GTAGATCCTGAGGACAACGCCAGTTCAACAAGCCAAACACCAACGACACA
TTGCACCAACACCTTTGTTAAGCTGACGATAGTTACCAAACTATCCTTTA
GCGAGCGTATAGCGATAGCTACCATCTTATTAAGTATATATTATATATAT
AGATACATACTCGGAGTATATATACCACTATATATATATATATGTGTGTG
TGTGTGTTATATCATCTCACTTATAGCCGACGGGCCCCAACGTTACCATC
CTGCGTGTGTTCACTAAGGATCTTCCCATCTATCCTCGGTTCACGCCGCC
TTACGATTTTTTTATCACGATGCAAGTTCAGCACTCGGTACAACTCGTCA
ACCAATCATAATGGTTGAATTTTACTTAATCGCGTCCTCACGCTTTCCGC
TACGGAAAAATTTAACACAAATTATGATTTGACCAAGAGTAGGACGCTTC
CGCGCTAGCAGGTGTGCAGGTTTTTACCTTAATAGCCACTCGGGCGACGA
GGGCCTGGGTATTGGAAATAACACTGGGGGGGTGGGGGAATCATCTTATG
TTCTCCGAGAGAGATTGTCCCCGGAGCCGGGCTGGCTCTCGCATCCCGAC
GTTATTAATAGTATCATCACAGTCGACCTTGACCTGCGTCTGTTTCCTCT
CGTTTTCACACAGGAGCCGCATTTGTCTCCTCTCGTTTCTAAGGGACTCC
TCCTAAAAAACAAAAAAAATTGCGGTAAAGAAAAAAAAAGTCGGCCGTAC
TTTCTCCGGCAGGCGCAGATTTGTGTTTTTTCCTTGCCAAAACTGCACCC
ATACCCTTATCCCATCATATATATGTTCGTATAGTGCTTCCAAAATATTA
TTGAGCAGTACGTTTTTCTATGTTTCTCCCTTTCGACATATTCTTGATCT
CTTTTTCCAGGTATCGCTCGAGCTGTCTACTCTGCCGGGAACGGCCAACC
GCAACCCAAAGCCTTTCAAGGTTCGAGAAATCACACCCGGAAAGGTAAAG
CCCCTCCAACTCGAAACCCTCAGAGGAGGCCTCGGCTGTAAGTCAAAAGC
AGGAATATCGAAACGGTCATTTTAGGATAACGAGGCGGAGAAAGTGAATA
TTCAAACGGTTCTCACCAATCGCTCTCCAAATTACTGCTTTCAAAACCCA
ACATTCGTGCCAGAGCAACTAGGATCGTTCTATGGATGTTCTATGGATGA
AACGGCCGTCGATATGGCTGCCCAAAGGGTGGTTGATTGGTGTACCCGCC
CTTGATGTTTGCTACGCCACCGCGCTCACAACAATAAGCACAGCTGGTTA
AGTGTTGAACCATGTTTGCTTCTCCCAGAGTGCCTTCGATTTTGCCATCG
CCGCCATGTAGGGAACTATCTTTTCCAGCGATGATACTATTATATGTAAA
AATAGTAACGCCTCTGCGGGGTTTCAGTTTTAAAGTGTTGGCGCAGTTGC
CACCCGGCGTGTACACTATTCTCGCCTGAAAAGAAGAGTTCGTATCGGAT
TTTGAACCTTACAGCTCATTCAAAAAGATTCCGCCGCTATCTTTCGGCTG
TCAAAAGTGTTACAAAAGCTCTTTTCGTAAAACCTAGGCTTGGCAAGCGA
CATCGTTCGTTGCTGTCTGGGTTTTTTTTAAGAAGAAAAAAAGTAGGGGT
ATTTTTAACCCATCCCCGAGTTTTCGTATTATGTATGTTATGCATTCCCC
CCACCCGAGATGTGGTGAATCCACCAACGCTACCGTCGTGCTGTCGGTGA
CATACGAACATAGGGTGCAGTATGAAAAAATAGTGGACACTGTCTGTGTG
AAAAGGTATTTTGTACGATGCAAGTCTCAGTTCAAAAAAAAAAAAAACGT
CGGGGAATAACGGGGGAAAAATGTAGATGTTGTTTTAAAAAAAAAACTAA
GCGTTTTCGGGGGAAAGCGTCCATTTTTTTGTTTCAGACGGAGGGGAGGC
AAGGACTCCCACGTCTTTCGTGCAAAACCCTTTCTAGACATGTGGCGCGA
TCATCAAAACCCAGACGTACATCCCCCCACCCCCCCAACCCCATCTTGGC
GTAGGCCAGCGCCCTTAAGGAGGAAGGGAGACCCCGACAAGTTTTTGTTC
GTGGTTTTGTGGGTGGGTGGGGGGTGGGGGTCTTGTTCTGGAGCTTTTTC
GTGGTTTGAGTTCTGTTTTTTATCTTATTTTATTTGTTTACTCATTTTAT
GGGGGATTCGGAGTAGCGTGTGTATGTGCGTATGTGCGTATTTGTTGAAT
TGCGCATAACCGCGCAATCCGGCCGTGTCATCCTAGTCATTCTATGCCAC
TCGCAGTTTGTGTGTGTTTGTGTGTACCAGTATTTAATAAGTTGCACATG
ACCGCAAAATCCGGCCCTGTGATCCTTGTTATTATATGCCCCTCACACTG
ATCCTCCTAAGGGGGTATCAATGATATCTATTGTGTGTGTGTATGTATTT
ATTAAATTGCACACAACCGCGCAGCCTGGTCCTCTCATCCCATTACAGTC
ATTTTTTATTTTTTATTATTTTTAATAATAACCGAGTGGTCTAGTAGGTA
ACCTAACCTGCACACCTATTAAAAAGAGTGCGGAGGTCTTGAGTTCGATT
CTTGGCTAAATCCGGATTTTTATTCTTGCTTCCGTAGCGGAAAGCGTGAG
AACGTGAGGAGGTAATAAAATGCCACCATTGGTTGACGAGTTGTAAGAGT
GCTGAACTTGCATCGCGATAAAAGATCGTAAGGCGTGAATCGGGGAGAGA
TGGGAAGATTCTTAGTGACCATAGGCAGAATGGCAACGTTGAGAGGCCCA
TCGGCTATACTATTAATAAGTGAGATGAAAAAAAAAAAAATGGTGGGGAT
CAAGGGCATTTGTAACCAAAACCTATGACTAGCTTGCTTATGTGTGTACC
AACCAGAGCTGCAGGAACAGACACCATCGCGCCGGCGCACTGACTCTTGA
CCACAAAGGATCGTGCTTCTTGGGGTGACCCCCGATCCCCGCTTCTGTAT
GCACCAGTCGCCAGCCGGGGGCACCGAAGTTTTCTTCGTCAATTGTTTCC
ACCCGCATTGGGGGGGGGATTACTTGTAAAAAGTCCTTTGCAAGGGTAAT
AAGAGGAAGGTAGGATTTTTGTCAAAATATTTCTTTTCGTCGCAAACTAG
GAAATCGGGAGGAATCCCGTGAGTAAGCGCCAGATTCAGGCTGAGTATGG
GGAATGAGCAGGCTGACGCGGGACGGCACGGCGGAACCCGTCTCGCGAGA
CTAAATTCTCAGACGCGAACGGGGACGGGGAAATGTTCGTTTTTCCCTGT
TTAGCTGACCACAACGAACAGGATTGGCAACCTTACCCGGTTGACCCATT
CTCTGCTATACGTGTGAGGACTATGACCATTAGTCTACACTACCGCATCA
ATGTTCCGCTCTGTACATCCCCCTTTCAAAAGAAGTCCGGCTTTTTACTT
CGACCCTCAAACTCATGATAACAAAAATCGTTCATCGCTACTACTTACCT
TTGACTTTAATCTAGCGCCCCGCTTACAAGTTACCCTATGGTGCATATTA
CCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTCTTGCAACTCCTCAACAC
CACAATGACTTTTTGCGTTTTGCGTGTCGATTTGCTCGTTTTCCGCATAA
CTTCTCCTTTGCGAGCAGGGGTATCTCGGGTTTAACACCAAAAATGCCGG
CAAGTACTCCCTCTGTGCCGTGTATAATACCATCAACTCCGACGATCGAG
TGGTGAGCCAATGTTTCGTTACAGCAACGCACGGCAGTACAGTAGTAAGT
AGTACTAGTTCAGTTGCCTGACTTTTTTTTTTTTTTTTTTTTTTTCAGGG
CCTTGGGAGAAGGCGGCAGGCGTTTTGAAGAGCGGGTCGGTAGAAGATTT
TTATTTTGGTGCTGTGTTTAATTAAGGAGCGGTTCAGAAAGTCAGATCGT
TTCGGGTCTTCACCCTTCGTCGTCTGATGCCGCTGGTTGCAGTGCTAGGT
GCAGTAGACACTGGGAAACAACAGTAGTGTTGCATCGCAATGTTCGCGTC
CGCCCCACCGCTTTGTTGATGAGGCGTAGCGGCTGGCGATGTTCGTGAGA
CTTATCTGCTCTCGTCAAAACTGAGAAGTTTTTTTTATTAATTTTCCGTT
ACGTAAACATTTGGTTAGGAAATGTAAAGACTTAATTGAGTCTTGCCTAA
GAACCCCATTTACGTAACCCCCGTCGTTTTAGAAACTTTTTTTTTTCGAA
GTAGGTGTGTAGTTGTGTACGTTACACAGATACTGTACACTTCAGTATTT
ACTTTTAATCTTATATATATATATGTATCTTATCCTGAAACGCAGATACT
GTACACTTCAATCTTTACTTTTAATCTTATATGTATGTCTCTTATACTGA
AACACAGATACTGTACACTTCAGCATTTACTTCAAATCTTATGTACATGT
GTCTCTTATCCTGAAATACAGATACTGTACACTTCAATCATTACTTTTAA
TCTTATATACATGTCTCTTATCCTGAAACACAAATACTGTACACTTCAGT
ATTTACTTTAAGTCTAATATATACGTCTCTTATCGAGAAACACAGATACT
GTACACTTCAATCTTTACTTTTAATCTTATATATATATATGTCTCTCATC
CTGAAACACAGATACTGTACACTTCAATGTTGACTTTTAATCTCATATAA
TATATGTCTCTTATCCTGAAACACAGATACTGCACACTTCGATATTTACT
TTTAATCTTATATATATATCTTATCCTGAAACACAGATATTGTACATTTC
AGTATTCACTTTTAATCTTATATACCTGGTATATGTTTCTTATCCTTAAA
CACAGGTACTGGACACTTCAGACTTTAGTTTTAATCTTATACATGTATGT
CTCTTATTCTGAAACACAGATACTGTAGATTTCAGTATTCACTTTTTATC
TTATATATATGTTTCTTATCCTGAAACACAGATACTGTACACTTCAATAT
TTAGTTTAAATCTTATACATGTAAGTATCTTATCCTGAAACACAGATACT
GTACATTTCAGTATTTACTTTTAATCTTATATATACCACTATATCTTATC
CTGAAACACAGATACTGTTGTACACTTAAGTATTTACTTTTAATCGTATA
CCTGGTATGTCTCTGATTGAAACCGGTGTGACTCTCATTACGTTCTGAAC
ATCGAAAATTATTATGTAACGACTGGTTACAGAACCCCCCCCTACAGAAA
CGCCTCTATCTGTATAAAGATCCGTTTCAATCGTAAGAGTGTCGGATTTT
AGCTTTTTTTTGTACTAAAGCATAATGAAAAAGTGATGCATGAGCCAAAA
CAACAGAAGGTCTAGGTGCATTCACATTTTTCTTTAAAAACGTATTCCCC
TTTTAAGCCGGTCGCCCCGGTGGTTCAGTTGGTAACCTCAAAACCCTCTG
ACGTTGGGACGCGAGTTCGAATCTTTGTGTAGTCACATAAATTCTTATTT
TTCATGCCCAACAAGTGGAGAACGATCAATTCGTGGGTACACCAAATTCG
ACTTCACGGTCGACGTGGGAAAGGGGCGGTTGAATCTTTCTCGCGATAAA
AGTTAAGGCAAGCACCGCAGAAGGAAGGTGGAAAAATCTTGTGTGACCTT
CCTTCTGTGTGACCTCGGCTGGTGCGTCCACAAGCCTGACGTCCAGAATA
AATGAGATAAAAACACATTCACACATCCATTTTATTGTTGCACATGGGTC
GGATCTTTTCAGTGAGACACCGGAAGAATCGATTAGAGGCGGCTCTTAGG
CGCGACTTGAAGTGGGCAGGCCGAGCGACTGACCATAACGCACCCTCCAA
TTATGTCCTTTGTGTTCCACCAATATGTGCACCTATCGTACATGATACCG
TCACCACGTCGAAGGGCCCGCCATAATGCCCCGGAAATCCTAGTTAAGGG
AACCCTATTTGAGGTTCCTCCAGGAAATTGGTAGGGGGGAAAATATGTGA
TGACAAAGTTAGGGTGAGGGAGGCAATCCGCGGTCGCAAACTGCCTCAAG
ACACCGGGCCCACCTTAAGTATATACAGAAAAGGCCCCGGTAGCTCAGAG
GTAACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGAATCCCGGTA
AACGGGATTTTTCTCACGAAATATGAAGAAAAATATATATATGCCCAACA
AGTAGAGAACAATTAAATCGTTAGTACGCAAAATTCGACTTCACGGTCGA
CGAAGGAAAGGAACGGCTAAATCCTTCTCGCGAGAAAAAATATTATCGCG
AGATAAAAATAAAGGCACGCACCGCAGAAGGAAGGTGGACGACAAATCCT
GTGTGACCTCGGCTGATACGTCCAATGAACTTGGTGTCCAGAAGGAATGA
AACGAAAACACACACACACACACACACACACACTTAATAAATACACACAC
ACACACACACACATGGGGGAGGGATGGGGTTGAAGAAGACCGATCCTTTC
TTTGAAAGGATTTTTGAGAGTCAAAAACGGGACGCGAACGCCGCGTTCCC
TAGGTCTAATTCTCTCGCTGACAGCGACCACAAGACACCAAGACGAATTT
ATCACTTGGCTCCAATGATGCAGACGATTTTATTTGTTTTTTTGTCATTT
TCCCCTCCTTGACGGCCAAGACTTGGAGAAAAAGAAGAAGAAGACAAAAA
AATGCCGGAACGGGCCTAAACTTGGACAGTCCTGGATGATTTTGCGCCAC
AGGTTTAGGAAATACCATCGTAAAAAAGAATGGACGGTGACAAAAAGACA
TTTTTATTCAAGGCACCATGAAGCGACAAATAAGCATGTTTCATATTTTC
CGATTGGGCTTGAGAGGGGCCACCCTCCCCCTCTCCCCCCCCCTGCCAAC
GCCCAGATGCAGGATAAGAGAACCATGACGGACTTGTTTACACTTGTTAC
CCCTGTCTTGTCCCCCCCTACGCGCGGCCTGCTTGCGTTTGAACTCCCTC
CTTTTGACGGCCAATTCTCTATCTGCCTCTCTATTTCTCTCTGGACGTAT
GTATCCCCTGTCCCCTATCCCCGCGTCCTACGCAGCAACTGTTTTTGGAT
GTTGAAGTGGGACCAAGCGAAGGGGAGTTCGATAAGATCAAGGCTGCGGA
GAGCTTAGACGATATGCAAATCGCTGTGGTGGGTCTGTTTGGCGGGGTGA
TCGGGAGGAGAGAAAAAAAACGTCGCCATTTACTGACTTTGCAATTGTAA
ACAGTTGCGCTGTTGGAACGATATAATGTTGTAGTATACCCGCAAGCACC
GTCGTGTGGTTGGAATCACGTTTTCACACCTCCTGGGGTGGTGTGTTTTT
TTCAGATTTTTCGGTGTATTTTTTTTTTAATATTTCGCTGTGTTTTTATT
CCAAATATTTTTCTGGGTTTCCTTTTTCTTTTCTTTTTTCAAATATTTTT
GCCCCTTTTTCTCTTCTTTTCAGTGTCTTTCGCGTTGTCGCTGCTTTCCC
CAGCGGTTTTTAAACGGAATGATTACATGGCGGGCCGAGAGAATCAATCG
CCGCCGCAGCTCGAGGGTGTCCCGCATTTGACTTATTAGGAAAACTGCTC
TTGAAGACTAGCCTCTCGAGCTCTTGACCTGTTTCCGTTAGGGTACACAG
CTTGTGAGAGACATAATAGAACTATAGATATATACTGGTACACAGCTCGT
GAGAGACAAATAGAACTGTGTCTATATATATATATATAATGTATATCGTA
GAACTATAGATATATACTGTTAACAAAAAACGCACATATAGATATACCCA
TCACACAAGGTAATCGTCGCTGCCCCGTGTAGCGGCGTGTATAACTACTA
ACTATCTGTGACTCGGTATTAAGGTGGAAATCCCGAGTTCGAGCATCGTG
TTTTCCATTCGATGGTTCTCGTATCGGGAAGCGTGCGACCTTGAGCAAGC
AGAGGTCAACCGTCCTTAGGAGGTTTTGACGAGGTTTGGTAAGAGTTTTG
AACTTGCTTCGCGATTGAAAAATAAAAACCTACCAGGGTATTGTACCACA
CACAGGCAACAGGCGTGTTCGTACCGGAAAGAGGGTGGGAGGATCCTCTC
TGAGGAGATGATCTCAGAAGGGTAGGGACTATGACATCATAGGGGCAACG
TTTCAGAAGGTGGAATCGGTATCATAGCCTATTTAGTAGCCCACGTTTTT
TTATCGGTCACACCTGACGTAAGTAAAAAAATAAAACATCTGAAGTCAAG
TAACAAATTTAACACTAGCGTGGTGCGTAACCGAAATGGTGACAGGTAAA
GCTGAGGAGTACAGCGAAGCTCATGCTCAACAAGGCGGACTTCATAAAAA
ACATGGAGATTCTGTATCACGGGAGCCTCCTGAGGCTCAATCGGGAGGCC
ACTGAGTGGCCAGTGGTGCAGGTATGCGCAGAATAAATATTTGGCGAATT
TTCCGCGAAATTTCTGTCAAGCTTGTTGCAACAAGTAATGGTCCCAGCAT
TAGAGTATAGAACAATAGTGTGTTCATGCTTTATGAAATTCTCAGGCGCA
GACGGGGGGAACCGTGGAAAAGTTTTTTTTCCTATTCAGGTTACTTACTA
TCCACCCCGTTCCATAAACCAAACCGTAGACTGCATCAAGATATTTCGGC
GGGCTGTTTATATAGAACCTATTATAGTTGAGAATCGCATCACGTGCACT
ACGCATTAAATATATTACTGTTTTTTTCAACTGGTAGGTTTTTGTAAGGG
AGGGGGGAAACCGCCCACGGGGACGTAGCACTCGTGTCCCCTTCCACCCA
CCCCAACGCTCCCTCTAAGGAGGCGTTATTACCAAGTTTTCAAAGCACTA
TCGATACCGTGGAGCTATGTCTCTCTGGACGCCGCTTACTGAATTACTTT
ACTCCAGTCGTGTCAAGAAGGTTCATTCTTTACCCCCCCCTGTTCAGGTC
TCCATCGACCGACGCCTCTCTTTTGATCCCGAACTTTTTTTTCTTGTCAT
TTTCCCCGCTTTTTTTGTTCCTTTTTTCGGTTAGGTGCTGATCCTCTTGG
CAGCGGGCTTCTACCAAGTGCGCCACCTGAAGCAATTCTTCAAAGCAAAG
CGTCTCGTATGATTTGTGAAGAAAACAAGCGCAACAATTCTGTACCGTAT
AATGATAAAGACGAGTGCCAGAAAATAAAAAATAAAATATGCGAGGTGTA
TAATATATACCAGTATATATATAAAGCGCCGGCCTCCGTTGTATAAGTAA
TTGTTCGCTGTTTTGTAGGTTGTTCGCCATTGGAGCTACTACTGCTGCTG
CCATGAGGAAGCGCTTTATAGTAACCGTGAGGAGGTTAAGGGAAAGGGAA
AATCTTTTTTTTTTGCTGTTCTTCGGAAGCGTTCCACTACACGCAAATAT
GACAAAACAATCACTTCGCACCACGACGAAATGACAAAACGCCGATAGAA
CTCTGCGAACCATTGGTTGTTGTCGTTCTTGTTTGTTTTTTTTTTTTTGT
TTTTTTTTGCGAAGTGTATTTTTTTGGCTTGAGATATTGCGTCATGATGG
GCAAAAAGTTCTCGATGGATTGATTGATGGAATTCTCACATGTAAGCTGA
TGTCATAAT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1211:134512..153220-

>mRNA_F-serratus_M_contig1211.1668.1 ID=mRNA_F-serratus_M_contig1211.1668.1|Name=mRNA_F-serratus_M_contig1211.1668.1|organism=Fucus serratus male|type=CDS|length=1488bp|location=Sequence derived from alignment at F-serratus_M_contig1211:134512..153220- (Fucus serratus male)
ATGACGATGCTGAGGTTGCTGAAGAGGGTGTCCTTCATCGGAACGCTGCT
GTGTGCCACCCTGGTGTTTCCTCAACGATCATTGGCCGACGAGGACGAGG
AGCCGATGCAACAACCCTACTTTTATTTGACCAAAGAGATGACGATGCTG
AGGTTGCTGAAGAGGGTGTCCTTCATCGGAACGCTGCTGTGTGCCACCCT
GGTGTTTCCTCAACGATCATTGGCCGACGAGGACGAGGAGCCGATGCAAC
AACCCTACTTTTATTTGACCAAAGAGACAAAGAATGACCAGAAAAATAAG
AGATGTTTTATGGTAACTGTGGGACGGCCGCTCGAGGAAAACGGCAAATT
GGGTCCCAGCTCGTTCCACGTCGACTACGATCTGCGAGACAAAGGGGAGA
AGCCGGGAGCAGCTAAGACAAAGAATGACCAGAAAAATAAGAGATGTTTT
ATGGTAACTGTGGGACGGCCGCTCGAGGAAAACGGCAAATTGGGTCCCAG
CTCGTTCCACGTCGACTACGATCTGCGAGACAAAGGGGAGAAGCCGGGAG
CAGCTAAGGTATCGCTCGAGCTGTCTACTCTGCCGGGAACGGCCAACCGC
AACCCAAAGCCTTTCAAGGTTCGAGAAATCACACCCGGAAAGGTATCGCT
CGAGCTGTCTACTCTGCCGGGAACGGCCAACCGCAACCCAAAGCCTTTCA
AGGTTCGAGAAATCACACCCGGAAAGGGGTATCTCGGGTTTAACACCAAA
AATGCCGGCAAGTACTCCCTCTGTGCCGTGTATAATACCATCAACTCCGA
CGATCGAGTGGGGTATCTCGGGTTTAACACCAAAAATGCCGGCAAGTACT
CCCTCTGTGCCGTGTATAATACCATCAACTCCGACGATCGAGTGCAACTG
TTTTTGGATGTTGAAGTGGGACCAAGCGAAGGGGAGTTCGATAAGATCAA
GGCTGCGGAGAGCTTAGACGATATGCAAATCGCTGTGCAACTGTTTTTGG
ATGTTGAAGTGGGACCAAGCGAAGGGGAGTTCGATAAGATCAAGGCTGCG
GAGAGCTTAGACGATATGCAAATCGCTGTGGTAAAGCTGAGGAGTACAGC
GAAGCTCATGCTCAACAAGGCGGACTTCATAAAAAACATGGAGATTCTGT
ATCACGGGAGCCTCCTGAGGCTCAATCGGGAGGCCACTGAGTGGCCAGTG
GTGCAGGTAAAGCTGAGGAGTACAGCGAAGCTCATGCTCAACAAGGCGGA
CTTCATAAAAAACATGGAGATTCTGTATCACGGGAGCCTCCTGAGGCTCA
ATCGGGAGGCCACTGAGTGGCCAGTGGTGCAGGTGCTGATCCTCTTGGCA
GCGGGCTTCTACCAAGTGCGCCACCTGAAGCAATTCTTCAAAGCAAAGCG
TCTCGTATGAGTGCTGATCCTCTTGGCAGCGGGCTTCTACCAAGTGCGCC
ACCTGAAGCAATTCTTCAAAGCAAAGCGTCTCGTATGA
back to top