mRNA_F-serratus_M_contig121.1653.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI) HSP 1 Score: 210 bits (535), Expect = 1.470e-54 Identity = 230/666 (34.53%), Postives = 304/666 (45.65%), Query Frame = 2
Query: 566 AFEENDLDETEMCQPGMENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDDDLDPSTLMSTTDAAGKPRLSSFVRSSRRYSLAHHGAGGMGGKLRNLPMRQSRGRNVRRLGIRIGRLSPQGRYSDSSSSXXXXXXXXXXXXXXXXXXXXXXXXXIT------------------SSINGSDIHDAISNTNKSGNDGEGDDGDGNKVTSGAECDGTIRPGSGNRALDARTTFETSRGFDFAGIAYVGGQAGGGAKKSRTPKKSTRTYPRKPFKIGHVRERSATD-ARALAWEAA---------------------------------------ASVGEDGRTRLKYGNAPRSNWISPTSVSDIKDSFIPFSRKYPEGLDASTATHLPQHITPTWCIKPPNNWIDGV------VDSTDAGPFRWFIDERSLAHPGAFFQPPAETWWSGSYTTDASTSVEASSGGEAVEADCKVTGSKPLAIEPPRNASIASQREVGATDKTETTSTLDGVEDSSRSKQKGPAGHTAP-ADGKGASRSSGDALEEANVA-------------------GVDNVDFSCGLWTDRLQESP---SPPFTCGLGLGPPSQT----------EPLWNAPLPTLDEEEAMGFLALDESD 2272
A ++LD +CQPG ENTGRW+S+EH+LFL G+ HGK WK+I LI TRTVVQ+RTHAQK+F+KLSKAQASG LDP+TLMST DA GKPR +S R+ R ++A+ A G +L +L R+ XXXXXXXXXXXXXXXXXXXXXXXXX +++ + ++ G GN GAE D + ++D ++ + GG AG +K R P KS R P K K + ARALAWE AS+G+ ++ + G + ++ ISPTSV+D+ +SF+ F E D + HLPQ + P+WC KP + W+ G +++ DAGPFRWFIDERSL+ PGAFFQPP ETW SGS TTD STS + + + L P N + G T+ ED S +K +G P +D AS S ++ A G ++D + GLW D QE+ + P GLGL P+ T LP+LDEEE +GFLA E +
Sbjct: 12 ASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDA-GKPRPASVSRNLRSSTMANSPAESEG-RLMSLRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHRGVYRETALGATXXXXXXXXXRQAEEAPAFTVGGGNSGAHGAEFDEEEAEEELDESVDVEGHNSNNKNVGISSSLLHGGTAGTWSK--RRPAKSHRPSPTKASKAAAIAXXXXXXXARALAWEXXXXXXXXXXXXXXXXXXXXXXXXXGTKRHRSESVSSSSNDASLGKTIKSLKRTGGSSQTTRISPTSVADV-NSFMSFPVPQTERSDMAMH-HLPQQLAPSWCTKPQDTWMAGAGLDMGGLEADDAGPFRWFIDERSLSAPGAFFQPPVETW-SGSDTTDVSTSAGSD------HQHHRTVVPEHL----PSNTNKVDMSPGGVL----TSDNTHNQEDVSIAKHRGMMEPIVPISDAAMASEVSRHVEADSATACAAAXXXXXXXXXXXXXXDGGHSLDITSGLWLDHPQEAHEAVASPLMYGLGLSAPANTGGAXXXXXXXXXXGGLSLPSLDEEEVLGFLACAEEN 656
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A7S2FCS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCS8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.730e-18 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 575 ENDLDETEMCQPGMENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGD 793
E L E P ENTGRW+ EEH +FLDG+ HGK WK I +I TRTVVQ+RTHAQK+F+KL+KAQ +GD
Sbjct: 108 EAQLPEQIRSMPNKENTGRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKLAKAQQNGD 180
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A7S2B3Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3Q8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.150e-18 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 575 ENDLDETEMCQPGMENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGD 793
E L E P ENTGRW+ EEH +FLDG+ HGK WK I +I TRTVVQ+RTHAQK+F+KL+KAQ +GD
Sbjct: 108 EAQLPEQIRSMPNKENTGRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKLAKAQQNGD 180
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR) HSP 1 Score: 95.1 bits (235), Expect = 8.760e-18 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 2
Query: 473 NSQHEDTTAAVITEVTDLRQTLGETMSSHVDAFEENDLDETEMCQPGM--------ENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDD 796
NS T ++EV R L T S ++N +M ENTGRW++EEH+LFL G+ HGK WKKI +LI +RTVVQ+RTHAQK+F+KL+KA+ +G++
Sbjct: 59 NSNRTPTKFPALSEVPHRRSALVSTAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEE 174
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC) HSP 1 Score: 95.1 bits (235), Expect = 4.230e-17 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 2
Query: 617 ENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDDDLDPSTLMSTTDAAGKP 847
ENTGRW++EEH+LFL G+ HGK WKKI LI +RTVVQ+RTHAQK+F+KL+KA+ SG D + +ST +A P
Sbjct: 308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSGAVDGHAALGVSTAEAHDGP 384
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A7S2R756_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R756_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 5.710e-17 Identity = 41/60 (68.33%), Postives = 53/60 (88.33%), Query Frame = 2
Query: 617 ENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDD 796
ENTGRW++EEH+LFL G+ HGK WKKI +LI +RTVVQ+RTHAQK+F+KL+KA+ +GDD
Sbjct: 189 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQTGDD 248
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A7S1C6P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.850e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 593 TEMCQPGMENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDDDLDPSTLMSTTDAAGKPRLSSFV--------RSSRRYSLAHHGAGG 910
T + G NTGRW+ +EH+ F+ G+ +G+ WKK+ ++IP+RTVVQ+RTHAQK+F+KL+K Q LDP + G+PR + R S+R ++ GAGG
Sbjct: 10 TRTTEKGTVNTGRWTRDEHERFVKGLELYGREWKKVASMIPSRTVVQIRTHAQKYFQKLAKEQG-----LDPRAEAAAR--RGRPRKEKIIVGSTGGTDRVSKRPRVSGGGAGG 116
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: B7GAX0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAX0_PHATC) HSP 1 Score: 97.1 bits (240), Expect = 8.990e-17 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 2
Query: 473 NSQHEDTTAAVITEVTDLRQTLGETMSSHVDAFEENDLDETEMCQPGM--------ENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDD 796
NS T A ++EV R L T S ++N +M ENTGRW++EEH+LFL G+ HGK WKKI +LI +RTVVQ+RTHAQK+F+KL+KA+ +G++
Sbjct: 59 NSNRTPTKFAALSEVPHRRSALVSTAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEE 174
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-16 Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 2
Query: 611 GMENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASG 790
G ENTGRWS EEH+LFL G+ HGK WKKI LI TRTVVQ+RTHAQK+F+KL+KA+ G
Sbjct: 27 GKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGG 86
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Match: A0A7S2UGN8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGN8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.130e-16 Identity = 40/60 (66.67%), Postives = 53/60 (88.33%), Query Frame = 2
Query: 617 ENTGRWSSEEHKLFLDGVHAHGKNWKKIVALIPTRTVVQVRTHAQKFFKKLSKAQASGDD 796
ENTGRW++EEH+LFL G+ HGK WKKI +LI +RTVVQ+RTHAQK+F+KLSKA+ +G++
Sbjct: 72 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLSKARQNGEE 131 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig121.1653.1 >prot_F-serratus_M_contig121.1653.1 ID=prot_F-serratus_M_contig121.1653.1|Name=mRNA_F-serratus_M_contig121.1653.1|organism=Fucus serratus male|type=polypeptide|length=582bp MSSHVDAFEENDLDETEMCQPGMENTGRWSSEEHKLFLDGVHAHGKNWKKback to top mRNA from alignment at F-serratus_M_contig121:624137..635051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig121.1653.1 ID=mRNA_F-serratus_M_contig121.1653.1|Name=mRNA_F-serratus_M_contig121.1653.1|organism=Fucus serratus male|type=mRNA|length=10915bp|location=Sequence derived from alignment at F-serratus_M_contig121:624137..635051+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig121:624137..635051+ >mRNA_F-serratus_M_contig121.1653.1 ID=mRNA_F-serratus_M_contig121.1653.1|Name=mRNA_F-serratus_M_contig121.1653.1|organism=Fucus serratus male|type=CDS|length=3492bp|location=Sequence derived from alignment at F-serratus_M_contig121:624137..635051+ (Fucus serratus male)back to top |