mRNA_F-serratus_M_contig121.1650.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: D8LE38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE38_ECTSI) HSP 1 Score: 294 bits (752), Expect = 1.590e-94 Identity = 142/223 (63.68%), Postives = 169/223 (75.78%), Query Frame = 3
Query: 582 VGARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
+ R EVA P FP RYLRGEVPCSK+CSA +AL+WVCPLEQLDY+YYLPMFFDGIRCLEEPC TLARQ GV DLLSA RG P+RILPSLP +++A+R+AI C NP ++IF C A+++LA GN++VGEALV YYK+FL + N F+N TKSTGD+IDYGQR N+ D+GEAV+ VETLERNGGK AFA IKHCIPTYQ+C+
Sbjct: 8 LSVRDEVAAVPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQ----------------GVSDLLSAARGYPQRILPSLPNIMRALRVAISCKNPGVIIFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQR--------NSQDVGEAVSCTVETLERNGGKHAFAHIKHCIPTYQTCV 206
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A6S9H4I7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H4I7_HETAK) HSP 1 Score: 226 bits (576), Expect = 2.180e-66 Identity = 141/383 (36.81%), Postives = 206/383 (53.79%), Query Frame = 3
Query: 108 GAPGLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVRE-GLSGHLPRDKVQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
G G+ +L++++KLL+QQ++++D + ++ NV+EKKR AQ ++ + GS N +N + P + RA + +R+ G S LP +Q + FK G D + K+H L + MER + R GA + + +FP RY RGE+PCS ++ +A AL WVCPL+ LDYD+YLP+FFDGIR E+P K LARQ GV +LL A RG PER+LP LP VV +R A+ +P +L+ G ++EL G N VGEALV YY+ L ++N F+ ++ GD +DYGQR+ D+ V +E LER GG AFA IK+ +PTY++C+
Sbjct: 7 GGAGIMELRMKKKLLEQQIAVLDSRAGKITNVLEKKR----AQKMRDQRAL---------------GSDNSSNQSKPPPSQ----LSRAGSSSMRQLGGSSSLPDLGIQART-------FKSGSTADRVRKQHLLNQYKTNMERESRKKEEARRRVPPKAGAFRRKEVPKTLFPVRYNRGELPCSVEHTAAGYALTWVCPLQTLDYDHYLPIFFDGIRATEQPYKFLARQ----------------GVRELLEAARGYPERVLPCLPEVVAGLRRALDTRDPPVLLAALGCVEELVGCNAGVGEALVPYYRQLLSVMNLFLAKRENLGDAMDYGQRRG--------EDLAARVGEVLEALERTGGPDAFANIKYSVPTYETCM 335
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S2Y192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y192_9STRA) HSP 1 Score: 208 bits (530), Expect = 6.960e-59 Identity = 141/406 (34.73%), Postives = 208/406 (51.23%), Query Frame = 3
Query: 117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQH-----------TKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDK-------------VQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGA---RKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
G+ +L+L++KL++QQL++++ +V+NV+EKKR KL + + Q S E GG S T R G+R + I R + G RD+ Q +AP K G D + KK L+ + ++R E R+R P A R+ +FP RY RGE+PCS ++ S+ AL+W+CPL+ LDY++YLPMFF+GIRC E+P K +A Q GV +LL A +G PERILP+LP VVK +R+A++ P+++I IQ L N +GEA+V YY+ L + N F ++ GD +DYGQR+ DI + +E LER GG+ +FA IK+ +PTY+SC+
Sbjct: 20 GIMELRLQKKLMEQQLAVLNMNEAKVSNVLEKKRAKKLREKRGVAGGGNSWGNADGLAGQRSVSATQLELGVGGNSFGGTG-RXXXXXGPMGGMRDVSPIDGRHQMGGSQTRDQHNEVHGHHPXXXXXQVDHHRIAPRTIKPGSDADRVRKKFLLRQAGQTLKR----EERERRPGPRPPKAGAYRRANEQGEILFPIRYKRGELPCSIEHKSSGYALLWICPLQTLDYEHYLPMFFEGIRCTEDPYKYMASQ----------------GVMELLDASKGYPERILPTLPEVVKYLRMALMSKLPDIIITALRCIQSLVLCNVGIGEAMVPYYRQLLSVFNLFRGKRRNLGDGMDYGQRKG--------DDINSVIDETLEVLERTGGEDSFANIKYMVPTYESCL 396
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A835YJW5_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW5_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.180e-53 Identity = 133/386 (34.46%), Postives = 189/386 (48.96%), Query Frame = 3
Query: 117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDKVQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPV-----GARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTT---KSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
G+ +LQLR+KLLQQQL LV K R+ V+EKK A+ H + A + ++T P R+P + G+ A+ H ++ Q F G ID+ K+ ++ + E E KA R + PV P FPGRY G++PCS + S L+WVCPL+QLDY YYLP+F DGIRC +PCK LARQ G+ DLLSA G+PER++P L + A+R A L ++ EL+ +TC ++ L G +VG ALV +YK FL LLN +N + G I + ++ D+ + ++ LER+GG FA IKH +PTY +C+
Sbjct: 12 GICELQLRKKLLQQQLELVSNKCNRMTAVLEKKGEAQARGHDRGADPLSHPKNT----------------PARRPR-NTFYGLEHASTHDAH-----HTAAARIGGAQT------FPPGSVIDNSRKRELIRKARHEWEHDKAA-REAAAAAKAPVQXXXXXXXXXXXATPSRFPGRYAMGDIPCSID-SGDGVLVWVCPLQQLDYHYYLPLFLDGIRCTADPCKMLARQ----------------GLLDLLSAATGTPERVVPLLKDIAMALRNACLTDSQELVAYTCKVLETLVGIGPEVGLALVPHYKAFLSLLNKHINDAPLKNAQGKEIGHNRKL----------DLSVLIEETLQMLERSGGSGVFAVIKHAVPTYMTCL 341
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S1TRG1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRG1_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.960e-49 Identity = 123/383 (32.11%), Postives = 197/383 (51.44%), Query Frame = 3
Query: 117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDKVQRQQDL----LAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
GLY L+L+++LL+QQL ++D + R+ N ++ KR T++ + Q G + K ++ +R+ E +R N + K Q L +AP P GG +D I K+ ++ + ++ RR+R+ P R ++ + P+F GRY RGE+P + ++ + L WVCPL+ LDY+YYLP+FF+GIRC +P + LARQ GV +LL A RG PER+LP L ++V +R A++ ++ ++LI +Q+L N VGEA+V YY+ FL + ++ GD +DY QR+ + DI ++ L++ GG A+A IK IPTY+SC+
Sbjct: 4 GLYDLKLKKRLLKQQLEVLDVREARI-NEIKMKR-------TQQRSSPQGGRGSPARLKPLDLEARRSRLLQRRQEAGQTAALRDFNRM-------------KPQASSSLAVYTMAPAPILPGGNMDRIRKRDAVRRTKLRLQGEAV--RRERANRKPPKPKRVDMKLTEPLFVGRYTRGELPATLEHRTNGYGLSWVCPLQSLDYEYYLPIFFEGIRCQRDPYRFLARQ----------------GVLELLDASRGYPERVLPYLESIVVPLRDAVVTHDEDVLIAVLMILQKLVTCNPGVGEAIVPYYRQFLAAFKRHYSHGENLGDGMDYKQRKGIT-------DICTMTAETLQLLQKTGGPDAYANIKWLIPTYESCL 340
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S2FEA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEA0_9STRA) HSP 1 Score: 177 bits (450), Expect = 8.000e-49 Identity = 101/269 (37.55%), Postives = 149/269 (55.39%), Query Frame = 3
Query: 444 LLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSC 1247
L P F + R+ I K++ L R+ E + +R GA ++ + +FP RY RGE+PC+ ++ S+ N L WVCPL LDY++YLP+F DGIRC E P LARQ G ++LL +G P+R++P +P ++K +RLA+ N+P++++ ++EL N VGEALV YY+ L +LN F+ + GD IDY Q F N D+ A+ +E LE+NGG AF IK+ +PTY+SC
Sbjct: 16 LREPELFPESSRVSIIRKRNIL----RQAEMDLSSQREVLPPPKPKAGAYRKKDVPTTLFPIRYKRGELPCAIEHRSSANGLSWVCPLHNLDYEHYLPIFVDGIRCTENPYCFLARQ----------------GCHELLEGAQGYPDRVIPCIPELIKPLRLALTTNHPDIILAALTFLKELVLCNYGVGEALVPYYRQLLSVLNLFLTKRTNIGDAIDYSQ-------FKGN-DMSTAIMETLEVLEKNGGSNAFINIKYMVPTYESC 256
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: F0Y431_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y431_AURAN) HSP 1 Score: 167 bits (424), Expect = 2.220e-45 Identity = 90/234 (38.46%), Postives = 135/234 (57.69%), Query Frame = 3
Query: 555 RQRSTHLHPV-GARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
R+R PV G ++ ++ +FP RY RGE+PCS ++ + N L W+CPL QLDY++YLP+F DGIRC E P + +ARQ G +L+ +G P+ +LP LP ++K IRLA+ +P+++ A+Q++ N VGEALV +Y+ L ++N F ++ GD I YGQR+ D+G AV +E LE+ GG AF IK+ +P Y+SC+
Sbjct: 19 RERRPFKGPVAGVFRKTKVEATMFPIRYRRGELPCSIEHRGSGNNLSWICPLLQLDYEHYLPIFLDGIRCTESPYQFVARQ----------------GFDELIEEAKGFPDCVLPCLPDLIKPIRLALNTKDPDIVHAALRALQKIVLSNYGVGEALVPFYRQLLSVMNLFFTKRQNLGDAIFYGQRKGT--------DLGTAVLETLELLEKTGGPNAFVNIKYMVPAYESCV 228
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S4ED43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED43_9STRA) HSP 1 Score: 162 bits (410), Expect = 9.350e-42 Identity = 84/223 (37.67%), Postives = 129/223 (57.85%), Query Frame = 3
Query: 585 GARKEVAIDPPVFPGRYLRGEVPCSKNCSAV-NALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
G ++ ++ VFP RY RGE+PC+ A N L W CPL QLDY++YLP+F DGIRC + K +ARQ G +++ +G P+ +LP +PA++K IRLA+ ++P++++ A+Q++ N VGEA+V +Y+ L+ +N F ++ GD+I YGQR+ D+G AV +E LE+ GG AF IK +P Y+SC+
Sbjct: 170 GVFRKQKVEETVFPTRYERGELPCAIEHGACHNTLSWACPLLQLDYEHYLPIFLDGIRCTDARYKFVARQ----------------GFDEMIEEAKGFPDCVLPVVPALIKPIRLALATHDPDIVVAGLNALQKVVLSNYGVGEAMVPFYRQLLQPMNLFYTKRQNIGDQIFYGQRKGT--------DLGTAVLETLELLEKTGGPNAFVNIKSYVPVYESCM 368
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A482SS01_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS01_9ARCH) HSP 1 Score: 154 bits (389), Expect = 3.650e-39 Identity = 93/262 (35.50%), Postives = 144/262 (54.96%), Query Frame = 3
Query: 480 IDHINKKHTLQNKQRE----MERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
I I + H ++ K R+ M +HKA E R + P R E+ I P + P RY RGE+PC+ ++ ++ L W CPLE LDY+YYLP+FFDG++C + +ARQ G+ D+L A RG PERI+P L + + +R A+ + E+L+ ++++L N +VG L++Y + FL + F++ K TGD+IDYGQR+ N D+GE + +E +E +GG A IK +P +S +
Sbjct: 90 ILRIRQNHGIRTKGRDEIRNMIKHKAEEERIKEEKNKPR-TRPEIKIPPSMLPNRYKRGELPCTIEHGTSGLYLSWACPLENLDYEYYLPLFFDGLQCKDHITSFIARQ----------------GIEDMLYASRGHPERIIPVLHLLARPLRNALAKFDEEILLPVLKSLEQLILSNAEVGAELLKYGRQFLVPIAYFMDKNKHTGDKIDYGQRR--------NDDVGEQIRRVLELMEEHGGPRALQLIKFSVPLCKSSL 326
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A0M9GB55_9TRYP (Putative mitochondrial PACRGB n=2 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9GB55_9TRYP) HSP 1 Score: 144 bits (364), Expect = 1.060e-35 Identity = 82/223 (36.77%), Postives = 118/223 (52.91%), Query Frame = 3
Query: 582 VGARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
GA + I P F Y RG++P S +A L+W + +LDY +YLP+FFDG+R LEEP +A Q G DLL +ILP++P ++ ++ A+ +P++L IQ+L + VGEALV YY+ L + N F N TK+ GDR+DYGQR N+ D+ + + LER GG A+ IK+ IPTY+SC+
Sbjct: 123 AGAYAKQRIPPTEFRHHYERGDLPLSVQHAAKRTLMWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAHQ----------------GSLDLLE---NGGAKILPTVPQIIMPLKTALNTRHPDVLRKVFHVIQKLVVSGDHVGEALVPYYRQLLPVFNLFKNRTKNMGDRMDYGQR--------NSQDLSSLINDTLYLLERYGGPDAYINIKYMIPTYESCV 318 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig121.1650.1 >prot_F-serratus_M_contig121.1650.1 ID=prot_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=polypeptide|length=405bp MPSSVACKHMPVPNTDGVCNCDGAPGLYKLQLRRKLLQQQLSLVDGKYKRback to top mRNA from alignment at F-serratus_M_contig121:590581..593737+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig121.1650.1 ID=mRNA_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=mRNA|length=3157bp|location=Sequence derived from alignment at F-serratus_M_contig121:590581..593737+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig121:590581..593737+ >mRNA_F-serratus_M_contig121.1650.1 ID=mRNA_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig121:590581..593737+ (Fucus serratus male)back to top |