mRNA_F-serratus_M_contig1200.1607.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: D7G1F4_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 3.980e-19 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 151 SSPTARGPNTFEVWSKDSHMFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNS 345
S+ A GP TF+VWS+DSH FC ECEDT AT+LC C+E YC LCW +LHRRG RAKH T PL S
Sbjct: 36 SNTKAAGP-TFQVWSRDSHGFCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGS 99
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 4.360e-19 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 151 SSPTARGPNTFEVWSKDSHMFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNS 345
SS A GP TF+VWS+DSH +C ECEDT AT+LC C+E YC LCW +LHRRG RAKH T PL S
Sbjct: 130 SSTKAAGP-TFQVWSRDSHGYCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGS 193
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: W7TKN4_9STRA (B box-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.600e-8 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 208 MFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNSTLVA 357
+FCIECED +A + CLGCEE++C+ CW HRRG RA+H + L ++A
Sbjct: 57 VFCIECEDQTAEVTCLGCEEDFCRPCWLFQHRRGKRAEHRVQALLGDVMA 106
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A2T9YP34_9FUNG (B box-type domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YP34_9FUNG) HSP 1 Score: 60.1 bits (144), Expect = 2.220e-7 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 193 SKDSHMFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNSTLVAGAIAGVGDARPAP 396
SK++ FCIEC D A L CL CEE +C++C++ +HR G R H TR S L + V D+ P P
Sbjct: 37 SKNNDDFCIECNDQKAALFCLSCEEAFCEVCFQIVHRAGKRKTHQTR---SFLPEHILEQVSDSNPDP 101
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A164ZMZ1_9AGAM (B box-type domain-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164ZMZ1_9AGAM) HSP 1 Score: 59.3 bits (142), Expect = 4.000e-7 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 205 HMFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNSTLV 354
H FC+ECED A + C CE++YC++C+ S HR+G R +H PL V
Sbjct: 49 HGFCVECEDQPAEIRCNTCEDDYCEVCYTSQHRKGNRKRHANTPLGPASV 98
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A1E3QNG4_9ASCO (Uncharacterized protein n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QNG4_9ASCO) HSP 1 Score: 56.6 bits (135), Expect = 3.380e-6 Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 211 FCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPL 339
FC+EC D + ++C+ C+E YC++CWE +HR G R H T+ L
Sbjct: 39 FCVECTDMPSEVVCVPCDENYCKVCWEVIHRSGKRRAHKTKKL 81
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A7S4HHA5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHA5_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 3.400e-6 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 214 CIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPL 339
C ECED A L C+ C+E YC++C++ LHR+G R KH T+ +
Sbjct: 79 CTECEDQPAVLFCVQCDETYCKMCFDGLHRKGNRTKHETKAI 120
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A165J2Q7_EXIGL (B box-type domain-containing protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165J2Q7_EXIGL) HSP 1 Score: 55.5 bits (132), Expect = 8.430e-6 Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 154 SPTARGPNTFEVWSKDSHMFCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNSTLVAGAIAGVGDARP 390
+PT+R N + C+ECED A + C CE+++C++C+ S HR+G R H T P++ +A A G +P
Sbjct: 38 APTSRHVNP---------LACVECEDQPAQIRCDQCEDQFCEVCFHSQHRKGSRKGHTTTPVDGAKLARQAAQNGAVKP 107
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A4Y9XSF1_9AGAM (B box-type domain-containing protein (Fragment) n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XSF1_9AGAM) HSP 1 Score: 55.5 bits (132), Expect = 8.830e-6 Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 211 FCIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPL 339
+C+ECED A + C C +++C +C+ +LHR+G R +H T+PL
Sbjct: 505 YCVECEDQPAEVHCEVCSDDFCDVCFSALHRKGTRKRHATKPL 547
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Match: A0A1Y1ZAN5_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAN5_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 1.540e-5 Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 214 CIECEDTSATLLCLGCEEEYCQLCWESLHRRGVRAKHVTRPLNST 348
CIEC DT + CL C++E+C+LC+ SLHR G R H +P ++
Sbjct: 39 CIECGDTPSIQRCLQCQDEFCELCFSSLHRTGTRRSHQVQPFQAS 83 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1200.1607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1200.1607.1 >prot_F-serratus_M_contig1200.1607.1 ID=prot_F-serratus_M_contig1200.1607.1|Name=mRNA_F-serratus_M_contig1200.1607.1|organism=Fucus serratus male|type=polypeptide|length=176bp DDPSNTTRSPAITALTYKGSVFSSSVVRSWSERSRGILQLLQPATLDCMCback to top mRNA from alignment at F-serratus_M_contig1200:179045..183090+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1200.1607.1 ID=mRNA_F-serratus_M_contig1200.1607.1|Name=mRNA_F-serratus_M_contig1200.1607.1|organism=Fucus serratus male|type=mRNA|length=4046bp|location=Sequence derived from alignment at F-serratus_M_contig1200:179045..183090+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1200:179045..183090+ >mRNA_F-serratus_M_contig1200.1607.1 ID=mRNA_F-serratus_M_contig1200.1607.1|Name=mRNA_F-serratus_M_contig1200.1607.1|organism=Fucus serratus male|type=CDS|length=1056bp|location=Sequence derived from alignment at F-serratus_M_contig1200:179045..183090+ (Fucus serratus male)back to top |