mRNA_F-serratus_M_contig1200.1602.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1200.1602.1
Unique NamemRNA_F-serratus_M_contig1200.1602.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: D7G1I4_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I4_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.110e-77
Identity = 139/186 (74.73%), Postives = 165/186 (88.71%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTDAKAFEITQVG 560
            DL NMGFALVSYTVNQ+ DSQGYM+ALGATQ +LVKREAAEGES+N++EAKKRVAENE+SAN+A+A +RAE HV +A+EDEKRAAADRDL +KKAAYK E+N A+A A VAF+IEKA+QGQ VV+E+TKQ+AEEAL++L+VQGTEAL +QKQKEG S AMLIEE N AE +RA+ DAKA EI QVG
Sbjct:  145 DLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVG 330
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: D7G1I5_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I5_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 3.300e-72
Identity = 131/177 (74.01%), Postives = 157/177 (88.70%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTDA 533
            DL NMGFALVSYTVNQ+ DS GYM+ALGATQ +LVKREAAEGES+N++EAKKRVAENE+SAN+A+A +RAE HV +A+EDEKRAAADRDL +KKAAYK E+N A+A A VAF+IEKA+QGQ VV+E+TKQ+AEEAL++L+VQGTEAL +QKQKEG S AMLIEE N AE +RA+ DA
Sbjct:  123 DLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNMSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA 299
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A6H5JYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR0_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 3.610e-42
Identity = 92/148 (62.16%), Postives = 113/148 (76.35%), Query Frame = 3 
Query:  141 IAEAKKRVAENETSANIADAAFRAEDHVNM------------------ALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTD 530
            ++EAKKRVAENE+SAN+A+A +RAE HV +                  A+EDEKRAAADRDL +KKAAYK E+N A+A A VAF+IEKA+QGQ VV+E+TKQ+AEEAL++L+VQGTEAL +QKQKEG S AMLIEE N AE +RA  D
Sbjct:    1 MSEAKKRVAENESSANMAEATYRAEAHVGVGHVAVQGMSPSRGSFNQVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRATAD 148
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A7S2S6C3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 9.440e-30
Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGV 515
            DL  MG+ L SY V +I D   YMQ+LG TQ ++VKREAAEGE++N AEA+K+VA  +  A+ A+A      H+ + L+ E+ AA+DRDL +KKA Y  E+NQA+A A  A  IE A+Q Q +V+ERTKQ+  E  I LE+      R +K+ EGAS+A L+++ N A+ +
Sbjct:  155 DLSAMGYGLASYVVQKIDDDSEYMQSLGVTQTAIVKREAAEGEAKNTAEARKKVAVYKAEADTAEAIEFQRAHLAVNLQKEQEAASDRDLNLKKAMYDREVNQARAEATAAGPIEDARQQQHIVRERTKQEQVEQGIKLEIADQIVERTKKEMEGASMARLLQQQNEAKSI 325
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A2R5GCP0_9STRA (Flotillin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCP0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.180e-29
Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTDAKAFEI 548
            DL+ MG+ L SY V Q+ D+  YM +LG TQ ++VKREAAEG ++N AEA+KRVA  +  A++A+A      HV +  + E  A +DRDL +K+AAY  E+NQAQA AE A  IE+A+Q Q +V+E T+Q   E  I LE+      R +K+KEG SLA L+EE N A+ +     A+A ++
Sbjct:  494 DLRAMGYGLASYVVQQVDDANDYMVSLGVTQTAIVKREAAEGSAKNEAEARKRVAAYKADADMAEAIEFQRAHVAVNQQKEAEAESDRDLHLKRAAYDREVNQAQAEAESAGPIEEARQQQSIVRENTRQLQVEESIKLEIADQIVERTKKEKEGESLARLLEEQNHAKSITVIAKAEADKV 675
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A7R9SVU7_9CHLO (Flotillin-like n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVU7_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 2.320e-29
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTDAKAFEITQVG 560
            DLK++G  L SYTV  I D  GYM ALGAT  S VKREA EG +RN+AEAKK V+     A +A+A      H   AL+ +  A ADRDL +K++ Y +E+N+A+  AE A  IE+A Q + V++E T+Q+ EEA +LL V   +  R + +  GAS A L+E+ N A+ +    +A+A  I ++G
Sbjct:  145 DLKSLGITLASYTVTNIGDENGYMDALGATATSAVKREAEEGTARNVAEAKKVVSRTMADAAVAEAEAMKMAHNAKALQGQAMAEADRDLELKRSRYASEVNKAREEAEAATRIERAIQNKAVIRETTQQQVEEAQVLLLVTEQQVARQKAELAGASEAKLLEQRNIAKSIEVAAEAEAGRIRRLG 330
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A7S3LS19_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LS19_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.900e-26
Identity = 78/172 (45.35%), Postives = 110/172 (63.95%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVR 518
            DL +MGF LVSYTVN I+D+  YM +LG TQ ++VKREAAEG++RN +EAKK+VAE    A IA+A    E HV +A +             KKA+++ E+NQA+A AE A  IE A+QGQ V++E+T+Q   E  I L++      R +K+KEG + A  + + + A+ VR
Sbjct:  165 DLASMGFKLVSYTVNDISDNSDYMLSLGITQTAIVKREAAEGKARNESEAKKKVAEYTAQARIAEAHALREAHVVVAQQXXXXXXXXXXXXXKKASFEREVNQARAEAEAAGPIESARQGQAVIREKTRQIEAEEKIKLDIADQTIAREKKEKEGMAFADKLAQTHKADAVR 336
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: C1FEY3_MICCC (Flotillin-like n=2 Tax=Micromonas TaxID=38832 RepID=C1FEY3_MICCC)

HSP 1 Score: 108 bits (270), Expect = 3.200e-23
Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEEWNTAEGVRARTDAKAFEITQVG 560
            DL  MGFALVSYTV ++ D +GY+ ALGATQ + VKREA EG+++N ++A+                 +    V         A + RDL +K+  ++ E+N+A A AE A  IE A Q Q VVK++T QK EEA ++L+V   E  R + + EGAS A LIE+ N AE  R   +A+A+E  Q+G
Sbjct:  143 DLLGMGFALVSYTVTEVDDREGYITALGATQTASVKREAEEGKAKNESQARIXXXXXXXXXXXXXXXXKRTSTVRANEFAASEAESMRDLQMKQQGFQKEVNEATARAEAAIRIETAIQNQKVVKQQTLQKVEEAEVMLQVTEREMERAKAEAEGASGAKLIEQKNNAESRRVAAEAEAYEKQQLG 328
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A7S3LRV4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRV4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.220e-22
Identity = 66/130 (50.77%), Postives = 89/130 (68.46%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQ 392
            DL +MGF LVSYTVN I+D+  YM +LG TQ ++VKREAAEG++RN +EAKK+VAE    A IA+A    E HV +A +             KKA+++ E+NQA+A AE A  IE A+QGQ V++E+T+Q
Sbjct:  165 DLASMGFKLVSYTVNDISDNSDYMLSLGITQTAIVKREAAEGKARNESEAKKKVAEYTAQARIAEAHALREAHVVVAQQXXXXXXXXXXXXXKKASFEREVNQARAEAEAAGPIESARQGQAVIREKTRQ 294
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BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Match: A0A7S0WQ90_9CHLO (Flotillin-like n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ90_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 4.440e-17
Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 3 
Query:    3 DLKNMGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRVAENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQAQAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKEGASLAMLIEE 494
            DL ++G +L SYTV  I D+ GYM ALG + I+ VKREAAEG SRN AEA K VA+ ++ + I  A      H   AL+ +  A ADRDL +K+A Y  E+N+A+  A  A  IE+A Q + V++                      R++ +K+G S AML+EE
Sbjct:  144 DLDSLGVSLASYTVTDIFDNNGYMDALGESAIAAVKREAAEGRSRNEAEAAKVVAKMKSESEIVQAEQTRLAHNAQALQQQNMAQADRDLELKRATYAAEVNKAKEEALAAGRIEQAIQQKAVIRAXXXXXXXXXXXXXXXXXXXXXRLKAEKQGTSEAMLLEE 307
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1200.1602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1I4_ECTSI1.110e-7774.73PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G1I5_ECTSI3.300e-7274.01PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JYR0_9PHAE3.610e-4262.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2S6C3_9STRA9.440e-3047.37Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GCP0_9STRA2.180e-2946.15Flotillin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
A0A7R9SVU7_9CHLO2.320e-2944.09Flotillin-like n=1 Tax=Polyblepharides amylifera T... [more]
A0A7S3LS19_9STRA1.900e-2645.35Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
C1FEY3_MICCC3.200e-2341.94Flotillin-like n=2 Tax=Micromonas TaxID=38832 RepI... [more]
A0A7S3LRV4_9STRA1.220e-2250.77Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S0WQ90_9CHLO4.440e-1740.85Flotillin-like n=1 Tax=Pyramimonas obovata TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1200contigF-serratus_M_contig1200:2995..9725 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.8
Seed ortholog evalue1.9e-65
Seed eggNOG ortholog2880.D7G1I4
Preferred nameFLOT2
KEGG koko:K07192
KEGG Pathwayko04910,map04910
Hectar predicted targeting categoryother localisation
GOsGO:0001666,GO:0001669,GO:0001765,GO:0001931,GO:0002020,GO:0002080,GO:0002252,GO:0002376,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002791,GO:0002793,GO:0003674,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005886,GO:0005901,GO:0005911,GO:0005912,GO:0005913,GO:0006582,GO:0006725,GO:0006810,GO:0006897,GO:0006950,GO:0006952,GO:0006955,GO:0007155,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008544,GO:0009506,GO:0009628,GO:0009877,GO:0009888,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010324,GO:0010468,GO:0010470,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016324,GO:0016600,GO:0018958,GO:0019222,GO:0019748,GO:0019899,GO:0022407,GO:0022409,GO:0022603,GO:0022607,GO:0022610,GO:0022622,GO:0023051,GO:0023056,GO:0030027,GO:0030054,GO:0030111,GO:0030139,GO:0030141,GO:0030155,GO:0030177,GO:0030659,GO:0030667,GO:0031090,GO:0031252,GO:0031254,GO:0031410,GO:0031579,GO:0031647,GO:0031982,GO:0032501,GO:0032502,GO:0032878,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033554,GO:0034613,GO:0035006,GO:0035010,GO:0035011,GO:0035254,GO:0035255,GO:0035592,GO:0035593,GO:0036293,GO:0036294,GO:0042221,GO:0042440,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044091,GO:0044237,GO:0044291,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044853,GO:0044860,GO:0045087,GO:0045121,GO:0045177,GO:0045184,GO:0045595,GO:0045661,GO:0045785,GO:0045995,GO:0046982,GO:0046983,GO:0048364,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050708,GO:0050714,GO:0050789,GO:0050793,GO:0050794,GO:0050821,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051641,GO:0051704,GO:0051716,GO:0055044,GO:0060255,GO:0061024,GO:0061356,GO:0061357,GO:0065007,GO:0065008,GO:0070161,GO:0070201,GO:0070482,GO:0070727,GO:0070887,GO:0071453,GO:0071456,GO:0071692,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0080090,GO:0090087,GO:0097223,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098657,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0099402,GO:0099503,GO:0120025,GO:1901360,GO:1901615,GO:1902991,GO:1902992,GO:1903037,GO:1903039,GO:1903044,GO:1903530,GO:1903532,GO:1903903,GO:1903905,GO:1904086,GO:1904951,GO:1905330,GO:1990778,GO:2000026,GO:2000047,GO:2000114
EggNOG free text desc.protein localization to membrane raft
EggNOG OGsCOG2268@1,KOG2668@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131,ko04147
Exons8
Model size880
Cds size651
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1200.1602.1prot_F-serratus_M_contig1200.1602.1Fucus serratus malepolypeptideF-serratus_M_contig1200 3009..9510 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929118.4907832-UTR-F-serratus_M_contig1200:2994..30081622929118.4907832-UTR-F-serratus_M_contig1200:2994..3008Fucus serratus maleUTRF-serratus_M_contig1200 2995..3008 +
1690962712.5247211-UTR-F-serratus_M_contig1200:2994..30081690962712.5247211-UTR-F-serratus_M_contig1200:2994..3008Fucus serratus maleUTRF-serratus_M_contig1200 2995..3008 +
1622929118.6533275-UTR-F-serratus_M_contig1200:9510..97251622929118.6533275-UTR-F-serratus_M_contig1200:9510..9725Fucus serratus maleUTRF-serratus_M_contig1200 9511..9725 +
1690962712.6362133-UTR-F-serratus_M_contig1200:9510..97251690962712.6362133-UTR-F-serratus_M_contig1200:9510..9725Fucus serratus maleUTRF-serratus_M_contig1200 9511..9725 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929118.5080538-CDS-F-serratus_M_contig1200:3008..30641622929118.5080538-CDS-F-serratus_M_contig1200:3008..3064Fucus serratus maleCDSF-serratus_M_contig1200 3009..3064 +
1690962712.5369103-CDS-F-serratus_M_contig1200:3008..30641690962712.5369103-CDS-F-serratus_M_contig1200:3008..3064Fucus serratus maleCDSF-serratus_M_contig1200 3009..3064 +
1622929118.518664-CDS-F-serratus_M_contig1200:3633..36731622929118.518664-CDS-F-serratus_M_contig1200:3633..3673Fucus serratus maleCDSF-serratus_M_contig1200 3634..3673 +
1690962712.5492845-CDS-F-serratus_M_contig1200:3633..36731690962712.5492845-CDS-F-serratus_M_contig1200:3633..3673Fucus serratus maleCDSF-serratus_M_contig1200 3634..3673 +
1622929118.527722-CDS-F-serratus_M_contig1200:4167..42841622929118.527722-CDS-F-serratus_M_contig1200:4167..4284Fucus serratus maleCDSF-serratus_M_contig1200 4168..4284 +
1690962712.569397-CDS-F-serratus_M_contig1200:4167..42841690962712.569397-CDS-F-serratus_M_contig1200:4167..4284Fucus serratus maleCDSF-serratus_M_contig1200 4168..4284 +
1622929118.5367713-CDS-F-serratus_M_contig1200:4589..47301622929118.5367713-CDS-F-serratus_M_contig1200:4589..4730Fucus serratus maleCDSF-serratus_M_contig1200 4590..4730 +
1690962712.5809069-CDS-F-serratus_M_contig1200:4589..47301690962712.5809069-CDS-F-serratus_M_contig1200:4589..4730Fucus serratus maleCDSF-serratus_M_contig1200 4590..4730 +
1622929118.5477993-CDS-F-serratus_M_contig1200:4872..50341622929118.5477993-CDS-F-serratus_M_contig1200:4872..5034Fucus serratus maleCDSF-serratus_M_contig1200 4873..5034 +
1690962712.5975125-CDS-F-serratus_M_contig1200:4872..50341690962712.5975125-CDS-F-serratus_M_contig1200:4872..5034Fucus serratus maleCDSF-serratus_M_contig1200 4873..5034 +
1622929118.5658755-CDS-F-serratus_M_contig1200:5628..57061622929118.5658755-CDS-F-serratus_M_contig1200:5628..5706Fucus serratus maleCDSF-serratus_M_contig1200 5629..5706 +
1690962712.6084402-CDS-F-serratus_M_contig1200:5628..57061690962712.6084402-CDS-F-serratus_M_contig1200:5628..5706Fucus serratus maleCDSF-serratus_M_contig1200 5629..5706 +
1622929118.576277-CDS-F-serratus_M_contig1200:6937..69761622929118.576277-CDS-F-serratus_M_contig1200:6937..6976Fucus serratus maleCDSF-serratus_M_contig1200 6938..6976 +
1690962712.6179154-CDS-F-serratus_M_contig1200:6937..69761690962712.6179154-CDS-F-serratus_M_contig1200:6937..6976Fucus serratus maleCDSF-serratus_M_contig1200 6938..6976 +
1622929118.6417837-CDS-F-serratus_M_contig1200:9492..95101622929118.6417837-CDS-F-serratus_M_contig1200:9492..9510Fucus serratus maleCDSF-serratus_M_contig1200 9493..9510 +
1690962712.6263719-CDS-F-serratus_M_contig1200:9492..95101690962712.6263719-CDS-F-serratus_M_contig1200:9492..9510Fucus serratus maleCDSF-serratus_M_contig1200 9493..9510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1200.1602.1

>prot_F-serratus_M_contig1200.1602.1 ID=prot_F-serratus_M_contig1200.1602.1|Name=mRNA_F-serratus_M_contig1200.1602.1|organism=Fucus serratus male|type=polypeptide|length=217bp
MGFALVSYTVNQIADSQGYMQALGATQISLVKREAAEGESRNIAEAKKRV
AENETSANIADAAFRAEDHVNMALEDEKRAAADRDLMVKKAAYKTEINQA
QAAAEVAFEIEKAKQGQIVVKERTKQKAEEALILLEVQGTEALRIQKQKE
GASLAMLIEEWNTAEGVRARTDAKAFEITQVGCAQAEAIFAKGEAEAKAR
TFEISQVGSAEHAATS*
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mRNA from alignment at F-serratus_M_contig1200:2995..9725+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1200.1602.1 ID=mRNA_F-serratus_M_contig1200.1602.1|Name=mRNA_F-serratus_M_contig1200.1602.1|organism=Fucus serratus male|type=mRNA|length=6731bp|location=Sequence derived from alignment at F-serratus_M_contig1200:2995..9725+ (Fucus serratus male)
AGGATCTCAAGAACATGGGATTCGCTCTAGTATCGTACACCGTGAACCAA
ATCGCGGACTCCCAAGGATAGTGAGTGCACCTCATAGACCCCCACATTCT
TCCTCCTAACAAGCGAATAATGTGTTTACGTTTGGTTGTGTGCCATGCGG
ATATGGGCTTGTAGTCACAGGATCGAGAGAAAAACGTGAAATATTATAGG
TACCTGTATAGAGGGCGAACAACGAGGACGAGAGAGAGAGAGAGACTGTA
GGGGGGGGGTAAGAGAGAGTCGATCCATTGCAGCTTTCAGCTCTGGTGCA
GTGAGAGGCAACTCCGCGATGCTCCGCATAACTCTTCGGCAAGAAACGCC
TGGCATACTGTCGGGGCAATAACTCCGCAGAAAGGTTTTTCTGCCTCTCT
CTATTCCGGGGTAGCAATGAGAAAGCGTAAGTACTAGAAACACCAGCAAC
GTAAAATATAAGGACCCTTGGTATCCTTGATTGGTTAACCACGTCAGCGC
GTTCACCTATTTACCCCAATTGATATAGCCCTTGACCTCCTCTCCCTCCC
CTACTCCTTGACAATCTACATGACGAGGTTTCATTCGCCCTTTGCATTCT
GTGTCCTTCTGCCTGGTGCCAACGCGCGTAAATATTCAGCATGCAGGCGC
TGGGTGCTACCCAAATTTCTCTCGTAAAGGTAGGGAAAATAGCTTCTAGT
TAGAGCTGTTACCAATGCAGATCACCTGTATGAAAAGCCGGAAGCCGCGA
AGCTTTGCCACAACTAGGTTGTTTTGTGCCGAACCTTAATGTCATCTCGA
TAAATTGTCGTTTATCTTGGAAATACCGGTGGCTTGTTTTGAGAGGGTGT
ATTCTAAACGTTCTCAAATCAACACATTGCCTGTATTCGCAAAGTCGCCG
TTTCCCGACCAGTTAAAGCTAACTGACGCTGGGGCCATCCCAAAGGCAGG
CAGAGCTTGTCTCGTCTCGTGTTGAAACGTTTTGAGCGGCATTGACCATT
GAATACGACAGCAAAGCCTTTTCCCCTCCTACCTGTCGTTATGGTGACCC
CTGACCCCCTCACCCAATCACTGTCCGCACATTTTTCGAAAGAAGAAAAA
TAAACAAATTTCTTCACGTGCGACCCACTCTTTGGTTTGTTCGTTTATAT
TTTTACATTTCATGTTCACGCAGCGCGAGGCTGCCGAGGGCGAGAGCAGA
AACATAGCGGAGGCCAAGAAACGAGTTGCAGAGAACGAAACTTCTGCCAA
CATAGCCGATGCAGCCTTCCGCGCGGAGGATCACGTCAACGTAAGTGCAT
CGTCTTTACTTTCCAAAAAACAAGTCTTCACCGCAGAGGACAATACTCCT
AAGGACGAGCACGGTTGACGCCCGCCCGCTTGCCGTCCGCGAGATTGAGA
GGATGCCGGTTCTTCGAGTTTCTCCTCTCCTGGGCAACGTTCCAGCGATA
TTCGGGTCTGAGAGTAGATACGCATAGAGCTGGGCTATCGAGCGACCCGA
GAAGAAAGCAACCACCTGTCTACATTATGTTCAATGGACCAACATTACCC
GCTGTTCACTCTATTAAATTTCATTTCCTACCCGCTCCCTACCAGATGGC
GTTGGAAGACGAAAAGCGCGCCGCGGCCGATCGAGACCTAATGGTGAAGA
AAGCTGCGTACAAGACAGAGATCAACCAAGCGCAGGCCGCCGCTGAGGTG
GCCTTCGAAATTGAAAAGGCCAAGCAGGGACAGATTGTAAGTACGTGTAT
CCAAAAATACTCACCGCGCTCGCGCTGTTGAGGGAGACGAAGATAGTAGG
CGCCGGAAACTACGCACTTATTTTCGAACACGAAAAATATGAGAGGTTGA
TGACGAACGATGACGACGTCTGCAATAGGTGGTGAAAGAACGAACGAAGC
AAAAGGCGGAGGAAGCGTTAATCCTTCTCGAGGTGCAGGGTACAGAAGCC
CTCCGGATTCAGAAGCAGAAGGAGGGTGCATCTCTTGCAATGCTGATCGA
GGAGTGGAACACGGCTGAAGGAGTCCGAGCTAGGACGGATGTAAGCACGC
CTTTCGATGACCAAGGCGTACTATAAGTATAAACGAAAAAGTAACAGCCG
CGCTGATTTGAACCGCTGATGGTGAAAGCAACAGTGTAACTTCCGTCTAG
ACGATATTTGAACTAATCACTCCGGTCTGTGGACACGGTAACATTATTTC
GTGTACGCCCCCGTGGCCTACTCCGCTTGGCGAAACGAAACTGCGGAGAA
AAGATCAAGCAATACAAAGGGCGTGGAAAGGAAACGATCTCGAAGTCGAA
CAATCGCATCCCGAATCCCTACTCTTGTCTATCCCCTATATATCCCCATG
AAAGAGGCGTAGAGGAATCGTCTTGGAACGTTTTCCGTTTACATGTCCGC
ACCTAAGAGAGTGATAATCACATCGTACGGACGTTGTTCTCAGGTGAGCA
TTTTTACAGAAGAAATGGATGGAGTTGCTAGTCCTGTCAACAAGAACGCA
GGATAACCCACGCCGGTCACAAACGTCCTGCTGAATGAAGTGCTACCTAT
TCCTACCCCATCTCTTAATGTCTTTATTTTGCGAATGACCCTCCTGCCCC
CCCCCCCCCCCTTCCCGTGCGTGACCGATATCAGGCCAAAGCCTTCGAGA
TCACCCAGGTCGGGTGTGCTCAGGCCGAGGCAATCTTTGCGAAAGGAGAA
GCTGAAGCCAAGGTTGGATGCGAAGGACTGAAACGTTTTTCCTCTAAACA
ATAAGCAAGAGTGGACGCCCTTCGATACAATCACACATACATGCTACCGC
TGCAGCAGCCATTCCTACATCGCGGTGGATTCTCAGTCGACCCATCAATC
ACACAAAGGCCGTCTCCACCTTTGTTGCAGATGATAAAAAGTACCATTCC
TTCCAAACATACGTAGTAGGGTATCCCACGACCTCGGCACACATCCTGCA
GAAGTGCTACCGAATCGTATCTTACCTCCGGATCGCTGCCATTTGTGAAC
GACCTACCTGGTCGTTCCTCGCCTCCCTCTCTCTGTACGCACCGAGTGCA
GGCCAGGGAAACGAAAAAGTAACAGCCGCGCTGATTTGAACCGCTGATGG
TGAAAGCAACAGTGTAAATTCCGTCTAGACGATGTTTGAACTAATCACAC
CGGTATGTGGACACGATAACCTTATTCCATGTACGCCCTCGTGGCCTACT
CCGCTTGGCGAAACGAAAAAACTGCGGAGAAAAGATCAAACAATACAAAG
GACGTGGAAAGGAAACGATCTCGAAGTCGAACAATCGCATTCCGAATCCT
GCTCTTGCCTATCCCCTATATTTTCCCATGAAAAAGGCATAGAGGAATCA
TCTTGAAACGTTTCCCGTTTGCATGTCCGCAGCTTAAGTGATAATCACAT
CGTACGGACGTTGTTCCCAGGTGAGCATTTTTACAGCTGCCTATTCCTAC
CCCATCTCTTAATTTCTTTATTTTGCGAATGACCCTCCTGCCCCCCCCTC
GCCCTTCCCGTGCGTGACCGAGATCAGGCCAGAGCCTTCGAGATCGCTTG
AGTCGGGTGTGCTCGAGCCAAGGCAATCTTTGCGAAAGAGAAGCTGAAGC
CAGGTTGGATGTGAAGGACTGAAACGTTTTTCCTCTGAACAATAAGCAGG
AGTGGACGCCCTTCGATACAATCACACATACATTCTCCTGCTGGCAGCAG
CCATTCCTACATCACGGTGGATTCTCAGTCGACCCATCAATCACACAAAA
CCGTCTCCAACTTTGTTGCAGACGATGTAAAGTACCATTCCTTCCAAACA
TACGCAGTAGGGTATCCCACGACCTCGGCACACACCCTGCAGAAGTGCTA
CCCGAATCATGCCTCACCTCCGGATCGCTGCCATTTGTGAACAACCTCCC
TGGTCGTTCCTCGCCTACCTCTCTCTGTACGCACCGAGCGCAGGCCAGGA
CCTTTGAGATCAGCCAGGTCGGATCTGCTGAGGCCGCGGCAATCTTGGCA
AATCATGCTCCCGCCGCGGTAGATATTCCTGCAGGAGCGCGCAATAAATT
TCCCGACAGAACCTTTTTTCAGTTCTGCAATCCCCCCTCCTCCCTAACTG
GCGGGTAAGAAATTCCTAAACGGAGCCTGTACTTGTGGGGATTTCTTTGG
GCTACAGAACTCAAGGCGATTTGACACCAAATACCATCATCGTAATGTAC
CCTCCAAACTGCACAGCGAAATGAACACATATATATGATATAAATATACA
TAAACCGAAAAAGAAAAACTATGTACATAGGGCCTATGCACTTACTGGTG
AAGGACCTGGACCAAAACCCTTTCGGCATCGTGTTCAGCCCTATCTCCTT
TCTATCCGTTCGACCATGTGTGGAGTACAGCTCTAACACTGATGTATCCG
AGTTCTCAACACAATCACTAACTCCCCATGGGGCGCCCGTTTGAGCAGAT
ATAACATATTTTCCCGCGCACGTTTGACAGTTTGACGTTGGTTTGATAAT
TTGGGTGGTCCTCTTGTCAGGTTCTCGAGATGCGGGGAGACGCTTTCTGC
GCACTTTTGGAAACGCCGTCATCGCAGAGCATCGTCGACAAACTACCCGA
CATCGCGCGTGAGGTCGCTGCGCCGCTCTCAGGACAGATAAGGTTTGCTT
TATATATATATAGTACGTTTGTTCGCTCTTTACGCCTCTTTTGTATCGTT
ATTGAGAAGAGACTTACTGTGTTTTTTAGTAGGTTATTGTCATGTTCTTG
TCGTCTACGAAACACACACCAAGGTTAATCTGCCAGGGACCAAACCAACT
GTTTAAACTCACCTCAGACCTAGGCAGCTCTTGTGGTCATCTCGTTTGCG
ATATACGGAGCAGTAGACGTAGCAACAATGTCGAAGGAACATGCTCACGA
TTTTAGGTTAGAGGAGGGGTGTAAATCAGGTCAGGGAGTAAAGGATCGAA
AAAGTGTGAGGCATGAGCGGTACAAACCTCTTTTGTAAGAGCGCATGGAT
CAGAGCAACCCTGTGTTTGGCACATGTAAGCCCTCTATAGGTGGTGAAGT
AGCTCATGCCAGCCGATGCATTTACAGTCGTCGAACTTCGGAAAGCGAGC
GACAAGAATTTCGTTCGCCCCACCACATGCATATTCTCAGATACATGGGA
ACGTCAGGGGGTTGAACGGTAGATTGGATAGTCCAACAAGTGCTTTCATG
TAGAGGCATGTACGTTTAACAGACTCATGTCAAGTTACACGCTGGAGCGT
GATGATCGAATATAGTTTTGAAGATATAGGGGAAACTCCTTATCTACCTC
TCTTTGTCATTTTGTGCAAGTGGGTTGTTTCTGAGGATCTCCACCTCACT
AAGTCACCACGTGCGATGATGAAAGCCCTACTCCCCCCCCCCCCCACCTG
TCCCCACCCGACCCTTTTTGCAAAATAGATGGTTTTCGTGTCTGGGGATG
GTGGGGGCGCTGGAAGTCGCCTTACCCAAGACATCGGCAATATCCTGTCA
CAGCTGCCCGTGACGGTGGAGGCCCTCACTGGGGTGGACATCACCAAGGG
ATTAGAGCGATACCTCGGAGAAGGCACCAAGGCCAACACCGCTGTCGACA
ACAAGGCTGCAAACGGCCCGAGGCAAATCTCTATTCCGCGCCGGGGCGAA
GTAATTTCCTCGCGCTAGCATGGTAAATGCGTCGCTTACACGGTTCAAAC
TAACGTGGTCGCTAGTAAATGTGTGGCCAGGTCTCAGTTTGATCGTCGCC
GTGCAGTGCGGGTCACTACGGGATGGTGGAATCATCGTCCCAAAACGAGA
ATCCCACCAGACGATGTCTCGTTTTCGCCTCTTACTCATAAAGTCGGCTA
AGGACGAGAATCCCATCAGACTTATCTCATTCGACGTCCCTTACCCCTAA
TCCCTTGGTGCTGCCCTTCATTTCGAGAGAGGGGAGCACGCTTGTACAAA
ACAGTTTCACTTTATATATAAATATTGAGTTTGAACTGAGGCGAAGCATT
TGGAGAGTCGAAGATCCTGTACTTTCTTCGGTGTTTAGTTGGTTGTCATC
AGTGATTACGTAGTAGAGGTACTCGAGCGAATGTGCAGGTCTATCAATAC
GGAGTCTAGATCAACCGTTGTCTATTGTGTTTGGACAAAAATCGGGAGGC
ATTATCGTTACATCGTAAACAAGGGAACAGGGGATGATGAAGGGTATGAT
TGCGAGTTCATCATTGTTCTCGGTGTACGAGGTCAAGAAGAGAGTGGATT
GAGTTAGCAGTCCACGCAACGACGGGATCTCTGTAGCTAAAGGATTGATA
GGGGATCAGTTGTGGTAAGCCAGAAACAGTCACGCCAGCGACTTGGTGAG
CTGGAGTTGGTGGCGGGCTCACGTGCGGGCTGTACTGCTGGACTGGAACA
GCATCGAAATTGAACTGCTAGGGCTGGAGCAGCACTGTAATTGGCACGTC
TAACCACAGTAGAGTGTTCACCGATGTAGCTGTGCACTGCGGCACCAGCA
CGCTGCAACCTCGTGACACCTCAGTCAAAGGCAATCAGCACTTCTGCACC
AAGTCGCGCTCCGTGTGTTTGTGTATGCGTGTGTGTGTGTGTGTTTACGT
ATGGTCACACATATAGCAAGAACATGGCTCAACCGGGTAAGGTTGCCAAT
CCTGCCCGTAGTTCGCTGACCAGATGATATGAATATTCCCCTATCCGCGT
TTGACAACGGAATAAACGGGAATTTTCTGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1200:2995..9725+

>mRNA_F-serratus_M_contig1200.1602.1 ID=mRNA_F-serratus_M_contig1200.1602.1|Name=mRNA_F-serratus_M_contig1200.1602.1|organism=Fucus serratus male|type=CDS|length=1302bp|location=Sequence derived from alignment at F-serratus_M_contig1200:2995..9725+ (Fucus serratus male)
ATGGGATTCGCTCTAGTATCGTACACCGTGAACCAAATCGCGGACTCCCA
AGGATAATGGGATTCGCTCTAGTATCGTACACCGTGAACCAAATCGCGGA
CTCCCAAGGATACATGCAGGCGCTGGGTGCTACCCAAATTTCTCTCGTAA
AGCATGCAGGCGCTGGGTGCTACCCAAATTTCTCTCGTAAAGCGCGAGGC
TGCCGAGGGCGAGAGCAGAAACATAGCGGAGGCCAAGAAACGAGTTGCAG
AGAACGAAACTTCTGCCAACATAGCCGATGCAGCCTTCCGCGCGGAGGAT
CACGTCAACCGCGAGGCTGCCGAGGGCGAGAGCAGAAACATAGCGGAGGC
CAAGAAACGAGTTGCAGAGAACGAAACTTCTGCCAACATAGCCGATGCAG
CCTTCCGCGCGGAGGATCACGTCAACATGGCGTTGGAAGACGAAAAGCGC
GCCGCGGCCGATCGAGACCTAATGGTGAAGAAAGCTGCGTACAAGACAGA
GATCAACCAAGCGCAGGCCGCCGCTGAGGTGGCCTTCGAAATTGAAAAGG
CCAAGCAGGGACAGATTATGGCGTTGGAAGACGAAAAGCGCGCCGCGGCC
GATCGAGACCTAATGGTGAAGAAAGCTGCGTACAAGACAGAGATCAACCA
AGCGCAGGCCGCCGCTGAGGTGGCCTTCGAAATTGAAAAGGCCAAGCAGG
GACAGATTGTGGTGAAAGAACGAACGAAGCAAAAGGCGGAGGAAGCGTTA
ATCCTTCTCGAGGTGCAGGGTACAGAAGCCCTCCGGATTCAGAAGCAGAA
GGAGGGTGCATCTCTTGCAATGCTGATCGAGGAGTGGAACACGGCTGAAG
GAGTCCGAGCTAGGACGGATGTGGTGAAAGAACGAACGAAGCAAAAGGCG
GAGGAAGCGTTAATCCTTCTCGAGGTGCAGGGTACAGAAGCCCTCCGGAT
TCAGAAGCAGAAGGAGGGTGCATCTCTTGCAATGCTGATCGAGGAGTGGA
ACACGGCTGAAGGAGTCCGAGCTAGGACGGATGCCAAAGCCTTCGAGATC
ACCCAGGTCGGGTGTGCTCAGGCCGAGGCAATCTTTGCGAAAGGAGAAGC
TGAAGCCAAGGCCAAAGCCTTCGAGATCACCCAGGTCGGGTGTGCTCAGG
CCGAGGCAATCTTTGCGAAAGGAGAAGCTGAAGCCAAGGCCAGGACCTTT
GAGATCAGCCAGGTCGGATCTGCTGAGGCCAGGACCTTTGAGATCAGCCA
GGTCGGATCTGCTGAGCACGCTGCAACCTCGTGACACGCTGCAACCTCGT
GA
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