prot_F-serratus_M_contig1200.1609.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1200.1609.1
Unique Nameprot_F-serratus_M_contig1200.1609.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length90
Homology
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BLAST of mRNA_F-serratus_M_contig1200.1609.1 vs. uniprot
Match: D7G1F4_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 4.730e-7
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:   47 GCGADWYRADSFSLQKGSMGITKEWASAVRTCCEIGRRHKIMNP 90
            G GA  YR DSF  ++   G T +WA A+RTC E+GRRHKI+NP
Sbjct:  601 GDGATGYREDSFVHKRTGWGYTLDWACALRTCFEVGRRHKILNP 644
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BLAST of mRNA_F-serratus_M_contig1200.1609.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 5.920e-6
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:   47 GCGADWYRADSFSLQKGSMGITKEWASAVRTCCEIGRRHKIMNP 90
            G GA  YR DSF  ++   G T +WA  +R+C E+GRRHKI+NP
Sbjct:  801 GDGATGYREDSFVHKRTGWGYTLDWACVLRSCFEVGRRHKILNP 844
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1200.1609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F4_ECTSI4.730e-756.82B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KSQ1_9PHAE5.920e-652.27B box-type domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1200contigF-serratus_M_contig1200:185400..186533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1200.1609.1mRNA_F-serratus_M_contig1200.1609.1Fucus serratus malemRNAF-serratus_M_contig1200 185400..186533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1200.1609.1 ID=prot_F-serratus_M_contig1200.1609.1|Name=mRNA_F-serratus_M_contig1200.1609.1|organism=Fucus serratus male|type=polypeptide|length=90bp
FGKGNAWQFLRGSSSAGGAPGGNGNGLVTPGGSGAKAADAAASKGKGCGA
DWYRADSFSLQKGSMGITKEWASAVRTCCEIGRRHKIMNP
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