prot_F-serratus_M_contig120.1598.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig120.1598.1
Unique Nameprot_F-serratus_M_contig120.1598.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length431
Homology
BLAST of mRNA_F-serratus_M_contig120.1598.1 vs. uniprot
Match: A0A6H5L1Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y8_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.410e-51
Identity = 149/378 (39.42%), Postives = 204/378 (53.97%), Query Frame = 0
Query:    6 EDGVSGAVEGRGALRPRTARADKLRPKQRQPIEPIDIKVHVAFRQCIGAQDTAFLLAEVLRHVMFMRGQLPMPYRQLLETLEKREDLDRI-------------------ARERRASRTVDEHRQGGSSFAPRSAATTSRGR-KSPKNQRPLSKALAHRRACKTLEALEATVLHMEQAFVDAAQKGRTVREALILLGASHLSPRELYTVVFLPPMGCPVDGSSGAQDPR---------------VPDAYSRKLVRCLVGEMWGASLRNLGPCRVHVFLRLAEG------FAAP--RRMQAAAAVTAGRDSVAGDPIPREP----GRHPRPPPEP---ILHLTPRPLFRVRTSKTRPAPRIMVEISRRVEPHEGNAEGVG 333
            E   +G+ E R A+     R   L  K++ P E  ++ V V F+Q +G+ D A ++ EVLRHV+FMRGQLPMP++QL++ L++RE+ D +                   ARE R  RT    R+GG +          R R K  K+ RPL+KA  HRRA K L AL  T L +E+AF DAA+KGR V EAL+LLGASHLSPRE+Y+V F    G  +D SS ++D                 + DAYSR LVR +VG+M    LR LG CRVH+FLR+AEG       AAP        A+ T    ++A     R      G +   PP     +  LTPRP F++R S++RPAP++ + +S+R       ++G G
Sbjct:    3 EVSTAGSTERRRAV---PGRKSGLARKRQHP-EQQEVTVPVVFKQHLGSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVKVLDEREERDEVDRXXXXXXXXXXXXXXXXXAREGRG-RT----REGGDALGSGLTGAVDRRRSKKAKSGRPLAKAPPHRRARKGLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSPREIYSVTF---SGSCLDESSESKDTTTRNTASSGDLRGKSSLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEGPVQDLCTAAPVANETMVEASSTLTSKTMASTASTRSSVNSGGSNSTGPPSGNSIVQRLTPRPGFKIRISRSRPAPKVSIVLSKRPPNVTDQSQGTG 368          
BLAST of mRNA_F-serratus_M_contig120.1598.1 vs. uniprot
Match: D7FJH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH5_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 3.530e-46
Identity = 121/280 (43.21%), Postives = 161/280 (57.50%), Query Frame = 0
Query:    6 EDGVSGAVEGRGALRPRTARADKLRPKQRQPIEPIDIKVHVAFRQCIGAQDTAFLLAEVLRHVMFMRGQLPMPYRQLLETLEKREDLDRI-----------------ARERRASRTVDEHRQGGSSFAPRSAATTSRGR-KSPKNQRPLSKALAHRRACKTLEALEATVLHMEQAFVDAAQKGRTVREALILLGASHLSPRELYTVVFLPPMGCPVDGSSGAQDP---------------RVPDAYSRKLVRCLVGEMWGASLRNLGPCRVHVFLRLAEG 252
            E   +G  E R A+     R   L  K++ P E +++ V V F+Q + + D A ++ EVLRHV+FMRGQLPMP++QL++ L++RE+                     ARE R  RT    R+GG +       T  R R K  K+ RPL+KA  HRRA K+L AL  T L +E+AF DAA+KGR V EAL+LLGASHLSPR++Y+V F    G  +D SS ++D                 + DAYSR LVR +VG+M    LR LG CRVH+FLR+AEG
Sbjct:    3 EASTAGPTERRRAV---PGRKSGLARKRQHP-EQLEVTVPVVFKQHLRSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVKVLDEREEXXXXXXXXXXXXXXXXXXXXXAREGRG-RT----REGGDALGSGLTETVGRRRSKKAKSGRPLAKAPPHRRARKSLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSPRKIYSVTFT---GSSLDESSESKDTATRNTASGGDVRGKSNLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig120.1598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1Y8_9PHAE3.410e-5139.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJH5_ECTSI3.530e-4643.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009511Mad1/Cdc20-bound-Mad2 binding proteinPFAMPF06581p31cometcoord: 32..88
e-value: 8.3E-6
score: 25.2
NoneNo IPR availableGENE3D3.30.900.20coord: 26..255
e-value: 7.4E-19
score: 69.6
NoneNo IPR availablePANTHERPTHR15681FAMILY NOT NAMEDcoord: 43..321
NoneNo IPR availablePRODOMPD125087coord: 35..193
e-value: 6.0E-6
score: 122.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig120contigF-serratus_M_contig120:746246..773468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig120.1598.1mRNA_F-serratus_M_contig120.1598.1Fucus serratus malemRNAF-serratus_M_contig120 746189..773599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig120.1598.1 ID=prot_F-serratus_M_contig120.1598.1|Name=mRNA_F-serratus_M_contig120.1598.1|organism=Fucus serratus male|type=polypeptide|length=431bp
MSKQVEDGVSGAVEGRGALRPRTARADKLRPKQRQPIEPIDIKVHVAFRQ
CIGAQDTAFLLAEVLRHVMFMRGQLPMPYRQLLETLEKREDLDRIARERR
ASRTVDEHRQGGSSFAPRSAATTSRGRKSPKNQRPLSKALAHRRACKTLE
ALEATVLHMEQAFVDAAQKGRTVREALILLGASHLSPRELYTVVFLPPMG
CPVDGSSGAQDPRVPDAYSRKLVRCLVGEMWGASLRNLGPCRVHVFLRLA
EGFAAPRRMQAAAAVTAGRDSVAGDPIPREPGRHPRPPPEPILHLTPRPL
FRVRTSKTRPAPRIMVEISRRVEPHEGNAEGVGQGVVFEGGGSTRVGSGG
RHCEGQTALDHDEVAAAAASGGGMEDERMESFGGAGRGEGQQSRGELEGG
VGRGQAGWHQLSCGRLAGMKGGGDSLLTTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009511MAD1/Cdc20-bound-Mad2-bd