mRNA_F-serratus_M_contig1005.157.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI) HSP 1 Score: 354 bits (909), Expect = 7.360e-116 Identity = 179/244 (73.36%), Postives = 202/244 (82.79%), Query Frame = 3 Query: 93 MEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNA-SRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSN 821 ++VADEHHWPEMRA ILV S KKDTSST+GMSTSVQTSPLLG +A++V PRLAEIEKAYLE+DFA+FGK TMQDSN FHATCLDT+PPIFYMND +SRSVI I+HAYNAFH EIRAAYTFDAGPNAVVYHLA DSAELLALLLRFYPAP S + + S SG YVN+ ++ A EADA L EGL EACLKTGRTP G+VKM+YYTK GG PRVL D+ RMLDLE+GD + P+ S S+ Sbjct: 193 VQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMND---VSRSVIRIVHAYNAFHGEIRAAYTFDAGPNAVVYHLAGDSAELLALLLRFYPAPAGSSTSNGSTSTSGAYVNSAAALEAAREADACLPEGLYEACLKTGRTPTVGEVKMVYYTKAGGPPRVLGDEERMLDLETGDPVFPSASGSS 433
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S1DAT8_CYCTE (Diphosphomevalonate decarboxylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAT8_CYCTE) HSP 1 Score: 246 bits (627), Expect = 7.040e-75 Identity = 133/231 (57.58%), Postives = 159/231 (68.83%), Query Frame = 3 Query: 96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 ++A E HWPE+RA ILV S KKDTSSTAGMSTSV TS LL +A + P R+ +IEKAYLE+DF +FG+ TM DSN FHATCLDT+PPIFYMND ISRSVI I+HAYNA+ EIRAAYTFDAGPNAV+Y L + + EL AL+L +YP+ GD YVNN + + L L EA +TGRTP AGDVKMIYYTK+G P+ L K +D +G Sbjct: 108 QIASEQHWPELRAIILVVSDQKKDTSSTAGMSTSVATSELLQHRATHIVPKRMEQIEKAYLEKDFETFGRVTMADSNQFHATCLDTYPPIFYMND---ISRSVIRIVHAYNAWAGEIRAAYTFDAGPNAVLYTLERYAIELSALMLHYYPSFGDN-----------YVNNPKFLVKIRSTQ--LDPQLLEATDRTGRTPQAGDVKMIYYTKSGPGPQTLSTKEANIDPTTG 322
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA) HSP 1 Score: 241 bits (616), Expect = 4.570e-72 Identity = 131/231 (56.71%), Postives = 158/231 (68.40%), Query Frame = 3 Query: 96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 +VA E HWPE+RA I+V S KKDTSSTAGMSTSV+TS LL +A++V P R+A IEKA+LE+DF SFG TM DSN FHATCLDTFPPIFYMND ISRS+I I+HAYN + EIRAAYTFDAGPNAV+Y L K + E+ AL+L FYPA D Y+NN + EE L + L A KTGR GDVK IYYT++G P+ LD ++D ++G Sbjct: 199 QVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMND---ISRSIIQIVHAYNFWAGEIRAAYTFDAGPNAVIYTLDKHAPEVAALMLHFYPACQDAQS---------YINNPSFAGKVEEYQ--LDKTLITAVEKTGRDATPGDVKKIYYTRSGPGPQRLDKSHAIIDPDTG 415
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A3G5BBY8_HASOS (Diphosphomevalonate decarboxylase n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY8_HASOS) HSP 1 Score: 234 bits (596), Expect = 3.440e-69 Identity = 126/235 (53.62%), Postives = 163/235 (69.36%), Query Frame = 3 Query: 84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 S +VADE+HWPE+RA I+V S KKDTSST+GMSTSV TS LL +A V R+ IEKA+L +DF SFG+ TM DSN FHATCLDT+PPIFYMND +S+S+I I+HAYNA+ E+R+AYT+DAGPNAV++ L K E+ AL+L +YP G+ Y++N + + +E L EGL EA KTGRTP AG VKM+YYTK+G P++L D+ LD ++G Sbjct: 190 SMAQQVADENHWPEIRAVIMVVSDEKKDTSSTSGMSTSVATSELLKHRAANVVSKRMEAIEKAFLAKDFESFGQLTMADSNQFHATCLDTYPPIFYMND---VSKSIIRILHAYNAWAGELRSAYTYDAGPNAVIFTLDKYVVEVGALMLHYYPEFGEN-----------YISNPEFGTKIKEFK--LDEGLLEATKKTGRTPVAGQVKMMYYTKSGPGPQLLTDQILNLDPKTG 408
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.820e-68 Identity = 128/232 (55.17%), Postives = 160/232 (68.97%), Query Frame = 3 Query: 96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAP-GDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 +VA E HWPE+RA ILV S KKDTSST+GMSTSV TS LL +A++V P R+ EIEKA+L +DF+SF K TM DSN FHATCLDT+PPIFYMND +S+SVI I+HAYNA+ E RAAYTFDAGPNAV+Y L + E+ AL+L FYP G G V + D +++ +E L L EA +TGR P AGDVKM+YYTK+G P+VL + ++D +G Sbjct: 201 QVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMND---VSKSVIRIVHAYNAWAGEERAAYTFDAGPNAVLYTLDNYAVEVGALMLHFYPGDAGSGYVSAGGT---------DFVEKVKEF--TLDASLLEAASRTGREPNAGDVKMMYYTKSGTGPQVLAKEEAIIDAVTG 418
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S4AXK4_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXK4_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.820e-68 Identity = 123/240 (51.25%), Postives = 163/240 (67.92%), Query Frame = 3 Query: 72 PGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLD-DKGRMLDLESG 788 P S +++ADE+HWPE+RA I+V S KKDTSSTAGMSTSV TS LL + KV P R+ IEKA+L +DF +FG+ TM+DSN FH+ C DT+PPIFYMND +SR ++ I+HAYN + E RAAYT+DAGPNAV+Y L K S E+ AL+ +++P+ G ++AS + D AL L EA K GRTPA+GDVKM+Y+TK+G +P+VLD +K LD ++G Sbjct: 184 PWSDSMAVQIADENHWPELRAVIMVVSDAKKDTSSTAGMSTSVATSTLLPHRIAKVVPERMVSIEKAFLAKDFEAFGELTMRDSNQFHSVCADTYPPIFYMND---VSRQIVRIVHAYNKWAGETRAAYTYDAGPNAVLYTLEKHSVEVGALMAQYFPSGGVDGFYNDASYASSVQ------------DFALDPSLVEAADKCGRTPASGDVKMVYHTKSGPAPQVLDNEKDGNLDPKTG 408
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A812XSB0_SYMMI (Mvd protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSB0_SYMMI) HSP 1 Score: 227 bits (579), Expect = 3.210e-68 Identity = 118/238 (49.58%), Postives = 157/238 (65.97%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 G S ++ADE+HWPE+RA ILV S +KDTSSTAGM TS+QTSPLL +A +V RL +IE AYL DF +FG+ TMQDSN FHATCLDT+PPIFYMND +SR +I I+H N F+ I+ AYTFDAGPNAVVY L ++S ++++ +++PA GD S +Y N+G + A + ++L L TGR P +GDVK ++ T+ G P+ LD MLD ++G Sbjct: 7 GTDSIAQQIADENHWPELRAVILVVSDREKDTSSTAGMQTSIQTSPLLRFRADEVVESRLRDIENAYLHHDFETFGRITMQDSNQFHATCLDTYPPIFYMND---VSRMIIRIVHVINDFYGCIKLAYTFDAGPNAVVYCLEEESRMFMSVVSKYFPAAGDYS---------DYCNDGRAFESAVSSQSSLPIELLRRLDMTGRVPQSGDVKYVFLTRAGPGPQCLDSSQAMLDTDTG 232
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA) HSP 1 Score: 229 bits (584), Expect = 9.570e-67 Identity = 132/268 (49.25%), Postives = 161/268 (60.07%), Query Frame = 3 Query: 93 MEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG--DVIDPTPSCSNGTSS*ETR*STRYRG*HAGAGCP 890 ++VADE HWPE+RA I VAS KK TSST+GM TSV TS LL +A + PRLA IE AYL RDFA FG++TM DSN FHATCLDT+PPIFYMND +SR+++ +HA+NA H IRAAYTFDAGPNAVVY A D A+LLA++ R +P P +A+ + AE A + E L A L R P AGDV+M+Y T+ G PRVL RMLD +G P P + +S H G CP Sbjct: 192 VQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMND---VSRALVQAVHAFNAHHGAIRAAYTFDAGPNAVVYTTASDVAQLLAVMSRAFPVPRGAPACSDAALA------------AEAAAEDVPEALLAAVLGAVREPRAGDVQMVYATRVGDGPRVLGAADRMLDPATGLNTYAAPPPPLPSAAASASP---------HGGCLCP 435
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1E7FHY1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHY1_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.580e-66 Identity = 122/241 (50.62%), Postives = 163/241 (67.63%), Query Frame = 3 Query: 69 SPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVL-DDKGRMLDLESG 788 +P S +++ADE+HWPE+RA I+V S KKDTSSTAGMSTSV TS LL + KV P R+A IEKA+LE+DF SFG+ TM+DSN FH+ C DT+PPIFYMND +SR+++ I+HAYN + E R AYT+DAGPNAV+Y L K E+ AL+ ++P+P + A+ + Y N+ + L+ L A KTGR P AGDVK IY+TK+G P+VL ++K LDL++G Sbjct: 185 TPWADSMAVQIADENHWPELRAVIMVVSDEKKDTSSTAGMSTSVATSTLLQHRIAKVVPERMASIEKAFLEKDFESFGELTMKDSNQFHSVCADTYPPIFYMND---VSRTIVRIVHAYNKWAGETRVAYTYDAGPNAVLYTLEKYVVEVGALMAHYFPSPATATT---AAAADGYFNDSTFANDV--TAFTLNSELLAATNKTGRVPNAGDVKKIYHTKSGPGPQVLSNEKDGNLDLKTG 417
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT) HSP 1 Score: 225 bits (574), Expect = 2.350e-65 Identity = 127/233 (54.51%), Postives = 149/233 (63.95%), Query Frame = 3 Query: 99 VADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTG---RTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 VAD+ HWPE+RA ILV + GKK+T ST GM TSV+TSPLL +A V PRLA +E AY RDF +FGK TMQDSN FHATCLDT+PPIFY+ND +SR I + HA+N I AAYTFDAGPNAV+Y AKD ELLA +L F+P P G VE Y N ++K AA + L+ A L G RTPAAGDVKMIY T G PR L +LD +G Sbjct: 200 VADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLND---VSRQAIRLCHAFNEHKGRILAAYTFDAGPNAVIYCEAKDRDELLAFMLHFFPPPRSG-VES-------YTNKPALLK------AAAAMPLEPALLAKGNELRTPAAGDVKMIYCTAVGDGPRTLGADEALLDAATG 415 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1005.157.1 >prot_F-serratus_M_contig1005.157.1 ID=prot_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=polypeptide|length=269bp MANIEFPTPRVVISPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTback to top mRNA from alignment at F-serratus_M_contig1005:114916..118841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=mRNA|length=3926bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1005:114916..118841+ >mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)back to top |