mRNA_F-serratus_M_contig120.1581.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI) HSP 1 Score: 310 bits (794), Expect = 4.350e-99 Identity = 157/223 (70.40%), Postives = 176/223 (78.92%), Query Frame = 1
Query: 172 IVDGASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDL 840
+VDG SYI+IGD YKG P RWKGKG SVPQ+P NAENGNFSRLEY+SEPY +MEKF KTQPLDKRKLGFGTKDA+R EFTATIRTEQYRDLLRAEK+ MEKHRD AK+QA +KY+K EHR FP GLKEI LYDVGRSQVT+FDPK SRD+FYT +S E+RRGPYR T DIG+GAW + Y SPEHGPI+H+K+FYDKSHL L
Sbjct: 1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYT-------LSIGQEKRRGPYR----TMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.700e-67 Identity = 125/233 (53.65%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDGASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDL 840
MY+TKR N+ I +G YI++GD Y+G PGRWKGKGF V Q+P NAENGNFS+LEYKS + EME++ KTQP RK GFGTKDA+R EFTATIRTEQYRD LR E++ M K D ++ +I + ++ R F GL E + LYDVGR+QVT FDPK SRD+FYT E R G +R T DIG+GAW + Y SPE GPI+H K F+D+SHL +
Sbjct: 1 MYSTKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQP--DRKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTP-------DINRERRMGGFR----TMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTV 218
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI) HSP 1 Score: 215 bits (548), Expect = 2.690e-62 Identity = 115/237 (48.52%), Postives = 153/237 (64.56%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDGASYITIGDKYKGFDFNR-PGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDLLPE 849
MY+TKR N +IV+G +I++GD YK + R PGRWKGK F P NA+NGNF++L+Y SEP+ E E+F KTQPL KR LGFGTKDA++ EFTATIRT+QYR++LR E+ M R++ E+ + + K R+F G +EI LYDVGRS +F+P D FY ++ +R GPYR T DIGN AW++ T+PE GPI H+K FYD+SHL++ E
Sbjct: 1 MYSTKRVNKNIVEGNRFISVGDPYK--ELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTG-------KRMGPYR----TMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGE 224
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK) HSP 1 Score: 191 bits (485), Expect = 2.580e-53 Identity = 114/234 (48.72%), Postives = 143/234 (61.11%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDGASYITIGDKYKGFDFNR--PGRWKGKGFSVPQIPPNAENGN-FSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHL 834
MY TKR N + +D SYI+I D Y NR P RWK K F+V +P N ENG F++ Y +PY E FIK QP D RKLGFGTKDA + EFTATIRTEQYR+ L+ E+ ++ RD A E +E+ +K E R FP GL E RLYD+GR VTDFDP+ SRD FYT + +R G H +T +G+GAW++ Y+ PE GPI ++K FYDK HL
Sbjct: 1 MYATKRINKNKID-VSYISIQDPYVE---NRKLPPRWKEKQFAVAHLP-NPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERARKRE-EERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYT-------LRKDRPKRLG----HHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHL 217
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN) HSP 1 Score: 182 bits (463), Expect = 4.800e-50 Identity = 111/238 (46.64%), Postives = 138/238 (57.98%), Query Frame = 1
Query: 142 MYTTKRFNNSI-VDGASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAENGNFS----RLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDL 840
MYTTK N ++ VD YIT+GD Y G P RWK K F VPQ+P NA G F Y+SE YTE ++KTQP DKRKLGFGT DA R EF+ TIRTEQYR+ L+ E D E A+ E KK + +KF KEI LYDVGRS T+FDPK RD+FY+ + E+R G + RT DIG+GAW + Y+ PE + +K F+D+SHLD+
Sbjct: 1 MYTTKFMNKNVTVDNGRYITVGDPYIGTKDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGRANNNGYD---EDAIEELMKKENAKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTY-----EKRMG----NNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHLDI 226
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.580e-48 Identity = 105/236 (44.49%), Postives = 141/236 (59.75%), Query Frame = 1
Query: 142 MYTTKRFNNSIVD-GASYITIGDKYKGFDFNR--PGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDL 840
MY T R + +++D ASY+TIGD Y D NR P RWK K F V P ++G F +Y+ E Y EME ++K+QP D+RK GFG+ DA R EFT+TIRTEQYR+ L+ E EK RD E+ V+ + M R F GL E LYD+G+ QVT+FDP+ SRD FY + +R G + T+ +G+GAW++ YT PE GPI ++K FYD+SHL +
Sbjct: 1 MYRTHRTHKNLLDKDASYVTIGDPY--IDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIAAEREMG-RTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYV-------MRKDRPKRLGAHT----TSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQI 222
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV) HSP 1 Score: 148 bits (374), Expect = 3.050e-37 Identity = 92/241 (38.17%), Postives = 138/241 (57.26%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDG--ASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEM-EKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSG--LKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRG--PYRHHG--RTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLD 837
MY+TK + +I +Y +IGD Y+ P RWK K F P+ P NA NG F + +Y +PYTE E++ KTQPL+KR+LGFG+ DA++ EFT+ TE+YR+++R E+ ++ RD +E+ +I+K + K G LKE LYDVGR+ VT + P+ +RD FY L + + + +G P R G R IG AW + Y PE G + +++ FYD+ H++
Sbjct: 1 MYSTKSIHKNINPNYQQTYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYK----LPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIE 237
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: B8BXP8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXP8_THAPS) HSP 1 Score: 140 bits (353), Expect = 1.810e-34 Identity = 87/222 (39.19%), Postives = 127/222 (57.21%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDG--ASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAENGNFSRLEYKSEPYTEM-EKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHR-KFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHG--RTTCNDIGNGAWEYNYTSPEH 789
MY+TK + +I +Y +IGD Y G PGRWK K F + P NA+NG F +L+Y+S+PYTE+ E++ KTQPLD RKLGFG++D +S EFT T++YR +++ E ++ HR+ +KE+ ++ K K + R + LK ++D+GRS VT ++P + D FY A N + P R G R + IG AW+Y Y PEH
Sbjct: 1 MYSTKSIHKNINPNYRQTYTSIGDPYNGNGERLPGRWKEKQFFTQKHPKNADNGFFVKLKYQSDPYTEISEQYSKTQPLDSRKLGFGSRDVSKSGEFTCYKATQRYRSVVKQENKLLQLHRNDSKEKELLGKPKDPTLPPRDRNGRELKSAKFMFDIGRSCVTAYNPNSAYDSFYNL--PKHAPVESNWQGNDPIRRLGSHRPSSTTIGEHAWKYGYQKPEH 220
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH) HSP 1 Score: 137 bits (344), Expect = 3.880e-33 Identity = 101/250 (40.40%), Postives = 131/250 (52.40%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDGASYITIGDKYKGFDFNRPGRWKGKG-----FSVPQIPPNAENGNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVI-EKYKKHVMEH------------RKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHH-GRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHL 834
MY++K + S+V +YIT+GD Y N P R KG F IP NAE G F++ Y E Y E K+I TQPLD+RKLGFGTKDA++ EF++ RTEQYR+ LR EK +MA+ V+ EK K + E G K I R YD+GR+QVTDF+PK +RDKFY + +E G Y + ++G AWE Y P G +K F+DKSHL
Sbjct: 1 MYSSKLVHKSMVANNAYITVGDPYHDPKAN-PFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYITTQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEK-------EMAESPEVVKEKLTKLLAERATMDFATQTRYTNTLSGGPKRI-RQYDIGRTQVTDFNPKATRDKFY-----------RFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHL 230
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Match: A0A8K1FR81_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR81_PYTOL) HSP 1 Score: 129 bits (325), Expect = 1.310e-30 Identity = 94/241 (39.00%), Postives = 130/241 (53.94%), Query Frame = 1
Query: 142 MYTTKRFNNSIVDGASYITIGDKYKG---FDFNRPGRWKGKGFSVPQIPPNAEN-----GNFSRLEYKSEPYTEMEKFIKTQPLDKRKLGFGTKDAYRSAEFTATIRTEQYRDLLRAEKSGMEKHRDMAKEQAVIEKYKKHVMEHRKFPSGLKEINRLYDVGRSQVTDFDPKISRDKFYTSFRALSAVSSKNEERRGPYRHHGRTTCNDIGNGAWEYNYTSPEHGPINHMKYFYDKSHLDL 840
MYTTK N +I SY+TIGD Y+ D P R KGK + IP A+N G F + Y S+P + ++KTQP+DKRK GFG+KDA R EF + +RTEQYR+ L E ++K + E+ E+ + + E R FP GL E LYD+GR+Q T+F+ K RD FYT + +S+ + GP+ T IG GA + + P + K FYD+SHL +
Sbjct: 1 MYTTKVLNKNIA--GSYLTIGDPYRDPHLIDGKGP-RHKGKQMTT--IP--AKNTCNGIGYFEKKTYSSDPLQDTTMYLKTQPMDKRKSGFGSKDASRREEFMSHVRTEQYRETLTKEMEIVDKQKKALSEEGRFEELEA-LEEQRTFPEGLTETKFLYDIGRTQNTEFNQKSHRDTFYT----MRTGNSQYKRNNGPFM----LTSESIGIGADDVSNNRPTPKGAS-TKQFYDRSHLHV 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig120.1581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig120.1581.1 >prot_F-serratus_M_contig120.1581.1 ID=prot_F-serratus_M_contig120.1581.1|Name=mRNA_F-serratus_M_contig120.1581.1|organism=Fucus serratus male|type=polypeptide|length=238bp MYTTKRFNNSIVDGASYITIGDKYKGFDFNRPGRWKGKGFSVPQIPPNAEback to top mRNA from alignment at F-serratus_M_contig120:103192..114570+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig120.1581.1 ID=mRNA_F-serratus_M_contig120.1581.1|Name=mRNA_F-serratus_M_contig120.1581.1|organism=Fucus serratus male|type=mRNA|length=11379bp|location=Sequence derived from alignment at F-serratus_M_contig120:103192..114570+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig120:103192..114570+ >mRNA_F-serratus_M_contig120.1581.1 ID=mRNA_F-serratus_M_contig120.1581.1|Name=mRNA_F-serratus_M_contig120.1581.1|organism=Fucus serratus male|type=CDS|length=1428bp|location=Sequence derived from alignment at F-serratus_M_contig120:103192..114570+ (Fucus serratus male)back to top |