|
Homology
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI) HSP 1 Score: 722 bits (1864), Expect = 1.610e-256 Identity = 362/433 (83.60%), Postives = 396/433 (91.45%), Query Frame = 1
Query: 1 MAPVIDKRLCVTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNA-SRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESGDAIYPTPSCSN 1296
M P ID RLCVTCSAPTNIAVIKYWGKD+VALNTPINSSASVTL QDDLRAITTVAASK+FEKDQLWLNG EEDV+KNKRFQAVIR+VRALAT+KRDEATG+V+VA+ DWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSL+KLFNA+ES+ GELS+IARQGSGSACRSLYGGFVKW+KG REDARDSIAVQVADE HWPEMRA ILV SA+KKDTSST+GMSTSVQTSPLLGFRA+EVV PRLAEIEKAYLE+DFA+FGKITMQDSNQFHATCLDT+PPIFYMND+SRSVIRI+HAYN FHGEIRAAYTFDAGPNAVVYHLA DSA+LLALLLRFYPAP S + + S SG YVN+ ++ A EADA LPEGL EACLKTGRTP G+VKM+YYTK GG PRVLGDEERMLDLE+GD ++P+ S S+
Sbjct: 1 MTPAIDSRLCVTCSAPTNIAVIKYWGKDSVALNTPINSSASVTLSQDDLRAITTVAASKDFEKDQLWLNGTEEDVSKNKRFQAVIRQVRALATEKRDEATGEVVVAEGDWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLAKLFNAKESFDGELSSIARQGSGSACRSLYGGFVKWQKGVREDARDSIAVQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMNDVSRSVIRIVHAYNAFHGEIRAAYTFDAGPNAVVYHLAGDSAELLALLLRFYPAPAGSSTSNGSTSTSGAYVNSAAALEAAREADACLPEGLYEACLKTGRTPTVGEVKMVYYTKAGGPPRVLGDEERMLDLETGDPVFPSASGSS 433
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA) HSP 1 Score: 525 bits (1351), Expect = 3.750e-178 Identity = 278/423 (65.72%), Postives = 317/423 (74.94%), Query Frame = 1
Query: 16 DKRLCVTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESGDAIYPTP 1284
D+RLCVTCSAPTNIA IKYWGK + LNTPINSS SVTL QDDL+AITTVAAS+ F KD+LWLNG EEDV NKR VI+ VRALA DK D TG+VLV KADW QY V IASRNTFPTAAGLASSAAG ACLTF+L++LF A E+Y GEL+AIARQGSGSACRSLYGGFV+W+KG+R DA DSIAVQVADE HWPE+RA I VASA KK TSST+GM TSV TS LL RA +V PRLA IE AYL RDFA FG+ TM DSNQFHATCLDT+PPIFYMND+SR++++ +HA+N HG IRAAYTFDAGPNAVVY A D A LLA++ R +P P +A+ + AE A +PE L A L R P AGDV+M+Y T+ G PRVLG +RMLD +G Y P
Sbjct: 5 DERLCVTCSAPTNIATIKYWGKASAELNTPINSSVSVTLHQDDLKAITTVAASRSFSKDRLWLNGKEEDVESNKRLTTVIKLVRALAGDKVDAKTGEVLVYKADWPQYHVHIASRNTFPTAAGLASSAAGYACLTFALAQLFAACETYDGELTAIARQGSGSACRSLYGGFVRWQKGERADAADSIAVQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMNDVSRALVQAVHAFNAHHGAIRAAYTFDAGPNAVVYTTASDVAQLLAVMSRAFPVPRGAPACSDAALA------------AEAAAEDVPEALLAAVLGAVREPRAGDVQMVYATRVGDGPRVLGAADRMLDPATGLNTYAAP 415
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA) HSP 1 Score: 472 bits (1215), Expect = 2.120e-158 Identity = 261/430 (60.70%), Postives = 307/430 (71.40%), Query Frame = 1
Query: 1 MAPVIDKRLCV---TCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEED-VTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKG-QREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESGDAIY 1275
M+ + DK V T SAPTNIA +KYWGK +V NTPINSS SVTL Q DLRA+TT +AS F D+LWLNG EE+ +KRF+A + VR LA D+ D TG+V+V K +W V IAS NTFPTAAGLASSAAG A L +L+KLFNA+E+YPGEL+AIARQGSGSACRSLYGGFV W G Q ED DSIA QVA E HWPE+RA I+V S KKDTSSTAGMSTSV+TS LL RA+EVVP R+A IEKA+LE+DF SFG ITM DSNQFHATCLDTFPPIFYMNDISRS+I+I+HAYN + GEIRAAYTFDAGPNAV+Y L K + ++ AL+L FYPA D Y+NN + EE L + L A KTGR GDVK IYYT++G P+ L ++D ++G Y
Sbjct: 1 MSRLTDKHANVHMETVSAPTNIACVKYWGKASVEYNTPINSSVSVTLDQSDLRAVTTASASMSFNSDRLWLNGAEEEGACLSKRFRACVDGVRRLANDRVDPKTGEVVVTKDEWADMHVHIASYNTFPTAAGLASSAAGYAALVAALAKLFNAKETYPGELTAIARQGSGSACRSLYGGFVAWRMGGQAEDWSDSIAEQVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMNDISRSIIQIVHAYNFWAGEIRAAYTFDAGPNAVIYTLDKHAPEVAALMLHFYPACQDAQ---------SYINNPSFAGKVEEYQ--LDKTLITAVEKTGRDATPGDVKKIYYTRSGPGPQRLDKSHAIIDPDTGLNTY 419
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA) HSP 1 Score: 468 bits (1205), Expect = 7.550e-157 Identity = 255/417 (61.15%), Postives = 305/417 (73.14%), Query Frame = 1
Query: 34 TCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEED-VTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQ-REDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAP-GDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESGDAIY 1275
T SAPTNIA +KYWGK ++ LNTPINSS SVTL Q DLRA+TT +A + D+LWLNG EE+ + +KRF+A + V+ LA+D+ D TG V+V K DWD VRI+S NTFPTAAGLASSAAG A L F+L+KLF A+E+YPGELS IARQGSGSACRSLYGGFV W G +ED DS+A QVA E HWPE+RA ILV S KKDTSST+GMSTSV TS LL RA+EVVP R+ EIEKA+L +DF+SF KITM DSNQFHATCLDT+PPIFYMND+S+SVIRI+HAYN + GE RAAYTFDAGPNAV+Y L + ++ AL+L FYP G G V + E V + DA+L EA +TGR P AGDVKM+YYTK+G P+VL EE ++D +G Y
Sbjct: 17 TVSAPTNIACVKYWGKASIPLNTPINSSVSVTLDQTDLRAVTTASACTAYTTDRLWLNGAEEENASTSKRFRACVDGVKRLASDRIDPTTGDVVVKKEDWDTMHVRISSYNTFPTAAGLASSAAGYAALVFALAKLFCAKETYPGELSVIARQGSGSACRSLYGGFVAWRMGGLKEDWTDSLAEQVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMNDVSKSVIRIVHAYNAWAGEERAAYTFDAGPNAVLYTLDNYAVEVGALMLHFYPGDAGSGYVSAGGTDFVEKVKEFTL-------DASL----LEAASRTGREPNAGDVKMMYYTKSGTGPQVLAKEEAIIDAVTGLNTY 422
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT) HSP 1 Score: 468 bits (1203), Expect = 5.970e-156 Identity = 256/418 (61.24%), Postives = 303/418 (72.49%), Query Frame = 1
Query: 34 TCSAPTNIAVIKYWGKDNV-ALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKN----KRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTG---RTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESG 1263
TC+APTNIAVIKYWGKD LNTPINSSASVTL QDDL A+T++AAS +F D+LWLNG EED N KR + + E+R LA D+ D A+G V+ + Y+V + SRNTFPTAAGLASSAAG ACL +L+KL+N EE+Y G+LS IARQGSGSACRSLYGGFVKW KG++ DA DS+AV VAD+ HWPE+RA ILV +A KK+T ST GM TSV+TSPLL FRA VV PRLA +E AY RDF +FGK+TMQDSNQFHATCLDT+PPIFY+ND+SR IR+ HA+N G I AAYTFDAGPNAV+Y AKD +LLA +L F+P P G VE Y N ++K A AA+P L+ A L G RTPAAGDVKMIY T G PR LG +E +LD +G
Sbjct: 13 TCTAPTNIAVIKYWGKDEARGLNTPINSSASVTLDQDDLCAMTSIAASSDFVADRLWLNGKEEDTAGNGTHAKRLRKCLAEMRGLARDRVD-ASGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSRQAIRLCHAFNEHKGRILAAYTFDAGPNAVIYCEAKDRDELLAFMLHFFPPPRSG-VES-------YTNKPALLKAA----AAMP--LEPALLAKGNELRTPAAGDVKMIYCTAVGDGPRTLGADEALLDAATG 415
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A3G5BBY8_HASOS (Diphosphomevalonate decarboxylase n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY8_HASOS) HSP 1 Score: 462 bits (1188), Expect = 1.880e-154 Identity = 248/416 (59.62%), Postives = 302/416 (72.60%), Query Frame = 1
Query: 34 TCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEED-VTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKG-QREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESGDAIY 1275
T SAPTNIA IKYWGK + NTPIN S SVTL Q DL+A+TT AAS FEKD+LWLNG+EE+ +NKRF+A + V ALATDK D TG+VLV K DW + V I+S NTFPTAAGLASSAAG A L ++ L A+E YPG+ S IARQGSGSACRSLYGGFV W KG + D DS+A QVADE HWPE+RA I+V S EKKDTSST+GMSTSV TS LL RA VV R+ IEKA+L +DF SFG++TM DSNQFHATCLDT+PPIFYMND+S+S+IRI+HAYN + GE+R+AYT+DAGPNAV++ L K ++ AL+L +YP G+ Y++N + + +E L EGL EA KTGRTP AG VKM+YYTK+G P++L D+ LD ++G Y
Sbjct: 10 TASAPTNIATIKYWGKADAKWNTPINDSVSVTLDQADLKAVTTAAASLSFEKDRLWLNGVEEEGAAENKRFRACVDGVMALATDKVDPKTGEVLVKKEDWKKMHVHISSYNTFPTAAGLASSAAGYAALVAAMMFLVGAKEEYPGQFSTIARQGSGSACRSLYGGFVAWRKGGDKPDWSDSMAQQVADENHWPEIRAVIMVVSDEKKDTSSTSGMSTSVATSELLKHRAANVVSKRMEAIEKAFLAKDFESFGQLTMADSNQFHATCLDTYPPIFYMNDVSKSIIRILHAYNAWAGELRSAYTYDAGPNAVIFTLDKYVVEVGALMLHYYPEFGEN-----------YISNPEFGTKIKEFK--LDEGLLEATKKTGRTPVAGQVKMMYYTKSGPGPQLLTDQILNLDPKTGLNTY 412
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A7S2RMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMS8_9STRA) HSP 1 Score: 461 bits (1187), Expect = 1.100e-152 Identity = 253/420 (60.24%), Postives = 304/420 (72.38%), Query Frame = 1
Query: 13 IDKRLCVTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIE---EDVTKN---KRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQRE-DARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVL-GDEERML 1248
ID RLC T S PTNIA IKYWGK + NTPINSS SVTL QDDLRAITTV ASK+F D+LWLNG E DV+KN KRFQ + E+R LA D+ D TG VLV K DW QYR+ + SRNTFPTAAGLASSAAG ACL F+LSKLF + S ++S IARQGSGSACRSL+GGFVKWE+G + +DS AV VA ++ W +M ILVA+ +KKDTSST+GM+TSV+TSPLL FRAREVV RLA IEKAY R+F+ FG++TM DSNQFHATCLDT+PPIFY+ND+SR +IR++HA+N ++GEIRAAYTFDAGPNAV++ L K + LL+ +L ++P P S++ SR + N + A D A+ GL A TGRTP GDVKM+Y T G PRVL GD L
Sbjct: 4 IDPRLCETTSCPTNIACIKYWGKADRKFNTPINSSVSVTLNQDDLRAITTVVASKDFSSDRLWLNGEELDINDVSKNSHAKRFQTCLLEMRKLAEDRIDPNTGDVLVRKEDWSQYRIHVVSRNTFPTAAGLASSAAGYACLVFALSKLFQVKASLS-DISVIARQGSGSACRSLFGGFVKWEQGTAAANWQDSRAVPVASKEDWEDMATVILVANDKKKDTSSTSGMNTSVETSPLLAFRAREVVDGRLAAIEKAYRARNFSEFGQLTMADSNQFHATCLDTYPPIFYLNDVSRQIIRLVHAFNDYYGEIRAAYTFDAGPNAVIFVLKKHQSALLSYMLHYFPPP---SMDATPSRFQSFSNRPGEVAVA--LDTAVDPGLIAAGDATGRTPVPGDVKMVYLTGVGDGPRVLTGDSSEWL 417
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A485L4T9_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4T9_9STRA) HSP 1 Score: 442 bits (1138), Expect = 3.670e-147 Identity = 236/411 (57.42%), Postives = 300/411 (72.99%), Query Frame = 1
Query: 31 VTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESG 1263
VTCS PTNIAVIKYWGKDNVALNTP+NSS SVTL QD L+ +T++ AS+EF+ D++WLNG+E+++ +NKR QAV++E+R LA+ +ATG V +AKADW Y++ I S NTFPTAAGLASSAAG ACL S +LF AEE Y G+ SAIARQGSGSACRSL+GGFV+W+KG + D DS+A+Q+AD++HWPE+ A I V + ++KDTSST GM TS TS LL FRAREVV RLA IE AYL +DF +FGKITM DSNQFHATCLDT+PPIFYMN+ISR++I ++H YN G+I+AAYTFDAGPNAV++ K + +++ALL F+ D +VE R L + DA L + +KT TP A +KM+Y+T G RVL E ++DL +G
Sbjct: 4 VTCSTPTNIAVIKYWGKDNVALNTPMNSSVSVTLNQDQLKTVTSIVASQEFDADRIWLNGVEQNI-QNKRIQAVVKEMRRLASGNAVDATG-VKIAKADWPLYKLHIVSINTFPTAAGLASSAAGYACLVASSVELFAAEEEYDGQFSAIARQGSGSACRSLHGGFVRWDKGLKADGTDSLAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSDLLHFRAREVVDKRLAAIEAAYLAKDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISRNIINLVHKYNDAAGKIQAAYTFDAGPNAVIFLEKKHTQEVVALLRHFF----DSAVEPLEIRGPVDTTTLPAV------DAVLL-----SSIKTQPTPGA--LKMLYHTTVGDGRRVLPASESLIDLATG 395
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: A0A6G0XPY7_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPY7_9STRA) HSP 1 Score: 442 bits (1136), Expect = 7.610e-147 Identity = 235/411 (57.18%), Postives = 297/411 (72.26%), Query Frame = 1
Query: 31 VTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESG 1263
VTCS PTNIAVIKYWGKDNVALNTP+NSS SVTL QD L+ +T++ ASK+F D++WLNG E+++ +NKR Q V++E+R LA+DK + G +AKADW+ Y++ I S NTFPTAAGLASSAAG ACL +L++LF AEE Y G+ SAIARQGSGSACRSL+GGFV+W+KG + D DS+A+Q+AD +HWPE+ A I V + ++KDTSST GM TS TS LLGFRAREVV RLA IE AY DF +FGKITM DSNQFHATCLDT+PPIFYMN+ISRS+I ++H YN G+I+AAYTFDAGPNAV++ ++ +++ALL FY D+AS E +D D +L A +KT TP A +KM+Y+T G RVL E ++DL +G
Sbjct: 4 VTCSTPTNIAVIKYWGKDNVALNTPLNSSVSVTLNQDQLKTVTSIVASKDFTDDRIWLNGAEQNI-QNKRIQVVLKEMRRLASDKAVDQDGNT-IAKADWNNYKLHIVSINTFPTAAGLASSAAGYACLVAALAELFAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGSKVDGSDSLAIQIADHEHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSELLGFRAREVVDKRLAAIEAAYKAMDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISRSIIHLVHKYNDNAGKIQAAYTFDAGPNAVIFVEKHNTKEVVALLKHFY---------DSASTPLEIRGPVDATS-LPSVDPSLL-----ASIKTQVTPGA--LKMLYHTTVGDGRRVLPASEALIDLSTG 395
BLAST of mRNA_F-serratus_M_contig1005.150.1 vs. uniprot
Match: W4HDK2_9STRA (Diphosphomevalonate decarboxylase n=10 Tax=Aphanomyces TaxID=100860 RepID=W4HDK2_9STRA) HSP 1 Score: 439 bits (1128), Expect = 1.350e-145 Identity = 234/411 (56.93%), Postives = 296/411 (72.02%), Query Frame = 1
Query: 31 VTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLRAITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEATGKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAEESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQHWPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIEKAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAYNTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDNASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLGDEERMLDLESG 1263
VTCS PTNIAVIKYWGKDNVALNTP+NSS SVTL QD L+ +T+V ASK+F D++WLNG E+++ +NKR Q V++EVR LAT +A G+ +AKADWD Y++ I S NTFPTAAGLASSAAG ACL +L +L+ AEE Y G+ SAIARQGSGSACRSL+GGFV+W+KG + D DS+A+Q+AD++HWPE+ A I V + ++KDTSST GM+TS TS LLGFRAREVV RLA IE AY +DF +FGKITM DSNQFHATCLDT+PPIFY+N+ISRS+I ++H YN G I+AAYTFDAGPNAV++ K + D+LALL ++ D + E R NL + D L A +K TP A +KM+Y+T G RVL + ++D+ +G
Sbjct: 4 VTCSTPTNIAVIKYWGKDNVALNTPLNSSVSVTLNQDQLKTVTSVLASKDFPADRIWLNGAEQNI-QNKRIQVVLKEVRRLATSNAVDAHGRA-IAKADWDLYKLHIVSINTFPTAAGLASSAAGYACLVAALVELYAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGVKADGTDSLAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMNTSKDTSELLGFRAREVVHKRLAAIEAAYKAKDFETFGKITMMDSNQFHATCLDTYPPIFYLNEISRSIIHLVHKYNHHAGAIQAAYTFDAGPNAVIFVEKKHTKDVLALLSHYF----DSTTEPLEVRGPVDTTNLPHV------DPTLL-----ASIKAQPTPGA--LKMLYHTTVGDGRRVLTAADSLIDIATG 395
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 723.0 |
Seed ortholog evalue | 8.3e-206 |
Seed eggNOG ortholog | 2880.D7FTH9 |
Preferred name | MVD |
KEGG rclass | RC00453 |
KEGG ko | ko:K01597 |
KEGG Reaction | R01121 |
KEGG Pathway | ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 |
KEGG Module | M00095 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0003824,GO:0004163,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008284,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009889,GO:0009987,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016829,GO:0016830,GO:0016831,GO:0019216,GO:0019218,GO:0019222,GO:0019287,GO:0019538,GO:0019637,GO:0019693,GO:0030544,GO:0031072,GO:0031907,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034645,GO:0035383,GO:0036211,GO:0042127,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046465,GO:0046483,GO:0046490,GO:0046890,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051186,GO:0055086,GO:0062012,GO:0065007,GO:0070013,GO:0070085,GO:0071704,GO:0072521,GO:0080090,GO:0090181,GO:0090407,GO:0097384,GO:0106118,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930 |
EggNOG free text desc. | diphosphomevalonate decarboxylase activity |
EggNOG OGs | COG3407@1,KOG2833@2759 |
Ec32 ortholog description | Diphosphomevalonate decarboxylase |
Ec32 ortholog | Ec-21_001440.1 |
EC | 4.1.1.33 |
COG Functional cat. | I |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000 |
Exons | 12 |
Model size | 2063 |
Cds size | 1311 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928797.2189202-UTR-F-serratus_M_contig1005:22495..23247 | 1622928797.2189202-UTR-F-serratus_M_contig1005:22495..23247 | Fucus serratus male | UTR | F-serratus_M_contig1005 22496..23247 - |
1690962576.2702668-UTR-F-serratus_M_contig1005:22495..23247 | 1690962576.2702668-UTR-F-serratus_M_contig1005:22495..23247 | Fucus serratus male | UTR | F-serratus_M_contig1005 22496..23247 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928797.230227-CDS-F-serratus_M_contig1005:23247..23355 | 1622928797.230227-CDS-F-serratus_M_contig1005:23247..23355 | Fucus serratus male | CDS | F-serratus_M_contig1005 23248..23355 - |
1690962576.2814724-CDS-F-serratus_M_contig1005:23247..23355 | 1690962576.2814724-CDS-F-serratus_M_contig1005:23247..23355 | Fucus serratus male | CDS | F-serratus_M_contig1005 23248..23355 - |
1622928797.2438135-CDS-F-serratus_M_contig1005:24090..24232 | 1622928797.2438135-CDS-F-serratus_M_contig1005:24090..24232 | Fucus serratus male | CDS | F-serratus_M_contig1005 24091..24232 - |
1690962576.2898004-CDS-F-serratus_M_contig1005:24090..24232 | 1690962576.2898004-CDS-F-serratus_M_contig1005:24090..24232 | Fucus serratus male | CDS | F-serratus_M_contig1005 24091..24232 - |
1622928797.2594333-CDS-F-serratus_M_contig1005:24926..25115 | 1622928797.2594333-CDS-F-serratus_M_contig1005:24926..25115 | Fucus serratus male | CDS | F-serratus_M_contig1005 24927..25115 - |
1690962576.2983727-CDS-F-serratus_M_contig1005:24926..25115 | 1690962576.2983727-CDS-F-serratus_M_contig1005:24926..25115 | Fucus serratus male | CDS | F-serratus_M_contig1005 24927..25115 - |
1622928797.2769806-CDS-F-serratus_M_contig1005:25495..25647 | 1622928797.2769806-CDS-F-serratus_M_contig1005:25495..25647 | Fucus serratus male | CDS | F-serratus_M_contig1005 25496..25647 - |
1690962576.3065202-CDS-F-serratus_M_contig1005:25495..25647 | 1690962576.3065202-CDS-F-serratus_M_contig1005:25495..25647 | Fucus serratus male | CDS | F-serratus_M_contig1005 25496..25647 - |
1622928797.2911599-CDS-F-serratus_M_contig1005:26654..26707 | 1622928797.2911599-CDS-F-serratus_M_contig1005:26654..26707 | Fucus serratus male | CDS | F-serratus_M_contig1005 26655..26707 - |
1690962576.3151736-CDS-F-serratus_M_contig1005:26654..26707 | 1690962576.3151736-CDS-F-serratus_M_contig1005:26654..26707 | Fucus serratus male | CDS | F-serratus_M_contig1005 26655..26707 - |
1622928797.3070664-CDS-F-serratus_M_contig1005:27677..27762 | 1622928797.3070664-CDS-F-serratus_M_contig1005:27677..27762 | Fucus serratus male | CDS | F-serratus_M_contig1005 27678..27762 - |
1690962576.3244321-CDS-F-serratus_M_contig1005:27677..27762 | 1690962576.3244321-CDS-F-serratus_M_contig1005:27677..27762 | Fucus serratus male | CDS | F-serratus_M_contig1005 27678..27762 - |
1622928797.3239625-CDS-F-serratus_M_contig1005:29323..29393 | 1622928797.3239625-CDS-F-serratus_M_contig1005:29323..29393 | Fucus serratus male | CDS | F-serratus_M_contig1005 29324..29393 - |
1690962576.339705-CDS-F-serratus_M_contig1005:29323..29393 | 1690962576.339705-CDS-F-serratus_M_contig1005:29323..29393 | Fucus serratus male | CDS | F-serratus_M_contig1005 29324..29393 - |
1622928797.3355489-CDS-F-serratus_M_contig1005:30187..30281 | 1622928797.3355489-CDS-F-serratus_M_contig1005:30187..30281 | Fucus serratus male | CDS | F-serratus_M_contig1005 30188..30281 - |
1690962576.3511255-CDS-F-serratus_M_contig1005:30187..30281 | 1690962576.3511255-CDS-F-serratus_M_contig1005:30187..30281 | Fucus serratus male | CDS | F-serratus_M_contig1005 30188..30281 - |
1622928797.3478093-CDS-F-serratus_M_contig1005:31304..31437 | 1622928797.3478093-CDS-F-serratus_M_contig1005:31304..31437 | Fucus serratus male | CDS | F-serratus_M_contig1005 31305..31437 - |
1690962576.3632283-CDS-F-serratus_M_contig1005:31304..31437 | 1690962576.3632283-CDS-F-serratus_M_contig1005:31304..31437 | Fucus serratus male | CDS | F-serratus_M_contig1005 31305..31437 - |
1622928797.3576815-CDS-F-serratus_M_contig1005:32595..32668 | 1622928797.3576815-CDS-F-serratus_M_contig1005:32595..32668 | Fucus serratus male | CDS | F-serratus_M_contig1005 32596..32668 - |
1690962576.3710926-CDS-F-serratus_M_contig1005:32595..32668 | 1690962576.3710926-CDS-F-serratus_M_contig1005:32595..32668 | Fucus serratus male | CDS | F-serratus_M_contig1005 32596..32668 - |
1622928797.3673115-CDS-F-serratus_M_contig1005:33217..33291 | 1622928797.3673115-CDS-F-serratus_M_contig1005:33217..33291 | Fucus serratus male | CDS | F-serratus_M_contig1005 33218..33291 - |
1690962576.379669-CDS-F-serratus_M_contig1005:33217..33291 | 1690962576.379669-CDS-F-serratus_M_contig1005:33217..33291 | Fucus serratus male | CDS | F-serratus_M_contig1005 33218..33291 - |
1622928797.3790815-CDS-F-serratus_M_contig1005:33668..33806 | 1622928797.3790815-CDS-F-serratus_M_contig1005:33668..33806 | Fucus serratus male | CDS | F-serratus_M_contig1005 33669..33806 - |
1690962576.3900506-CDS-F-serratus_M_contig1005:33668..33806 | 1690962576.3900506-CDS-F-serratus_M_contig1005:33668..33806 | Fucus serratus male | CDS | F-serratus_M_contig1005 33669..33806 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1005.150.1 >prot_F-serratus_M_contig1005.150.1 ID=prot_F-serratus_M_contig1005.150.1|Name=mRNA_F-serratus_M_contig1005.150.1|organism=Fucus serratus male|type=polypeptide|length=437bp
MAPVIDKRLCVTCSAPTNIAVIKYWGKDNVALNTPINSSASVTLCQDDLR AITTVAASKEFEKDQLWLNGIEEDVTKNKRFQAVIREVRALATDKRDEAT GKVLVAKADWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAE ESYPGELSAIARQGSGSACRSLYGGFVKWEKGQREDARDSIAVQVADEQH WPEMRAFILVASAEKKDTSSTAGMSTSVQTSPLLGFRAREVVPPRLAEIE KAYLERDFASFGKITMQDSNQFHATCLDTFPPIFYMNDISRSVIRIIHAY NTFHGEIRAAYTFDAGPNAVVYHLAKDSADLLALLLRFYPAPGDGSVEDN ASRSGEYVNNLDIMKEAEEADAALPEGLQEACLKTGRTPAAGDVKMIYYT KTGGSPRVLGDEERMLDLESGDAIYPTPSCSNGTSS* back to topmRNA from alignment at F-serratus_M_contig1005:22496..33806- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1005.150.1 ID=mRNA_F-serratus_M_contig1005.150.1|Name=mRNA_F-serratus_M_contig1005.150.1|organism=Fucus serratus male|type=mRNA|length=11311bp|location=Sequence derived from alignment at F-serratus_M_contig1005:22496..33806- (Fucus serratus male) ATGGCGCCCGTGATCGACAAGCGTTTGTGCGTCACGTGCTCCGCCCCGAC
CAACATCGCGGTCATCAAGTACTGGGGGAAGGACAACGTCGCCCTCAACA
CTCCGATCAACTCCTCCGCCAGTGTGACGCTCTGTCAGGTTAGGTACAGA
AAGCAGTAGCTGCAGTATCATACCGTATTTATTAGGAATAAGGGAATAAA
GGGTCAAATATTCTGTGATTTGGACGAGGCATCCGGAGAGTAGTTGTCGC
AAAGCACTCGTTCCATCTTTGTATCTCTGTTTTTTGTAATGAGGCGTTAC
TTGCGACGTGTCCCCCGCCCCGCACCGTCCCCCCGTCTCCAAGAACGTAA
CAAAGAGCAGCCGAGAAGGTCGATGCTGGAGTCGTTTCGATCTTACCTTA
TTTTCCCGACTTTTTCTACAGCGTGCCAACTAATATAATATATATTTATG
TATATATATATATATTGTTACTGGGATTTGTGACATGTTTTGTGCTGTGC
CCGGAATTGGCTCAGGATGACCTGAGGGCGATTACAACGGTGGCTGCGAG
CAAGGAGTTTGAGAAGGACCAGCTGTGGCTCAATGGCATGTGAGGGCTCT
CTCCCCTCCCCTTAGCCGCCTTAGCCTCCTTAGCCTCCTTAGCCTCCTTA
GCCTCCATGGCAATCCATGTACCGGGTAGGAAAGTACTCCGAATCTCGTT
GACCTGGCCCGCCCGATGAGACTCATTGATGATGTGCTTAGAAGTGCGTA
GTGGTATTGATTCCCAAGTACTGAACAAGGCTTGCCACGGCACGAAATAG
GGTCTCCTTGAAGAGGGAGACATGGCTCCTGCATTAGGCGTGTACCGTGT
GAAGTGTTCCTGGTACATTCATGGACATGAATCTCCATTATAGCATTGCA
TCGGGAGACGGAACGTCAACCCACCCCAAAGCCTGAAATATACTACAATA
TCAATAGTAACAGTACCGATCCCGCTCCCCGCCCCATAACGCATCTACTG
GGCTATTAATAAACCCTTACCAGGTATGTTCTTGCTTATAGTGTATTTTC
TTACTACTAATATTACTATGATACAGTATTTTTGAATTACGGCATTAATC
GTGTATACTGGTAATATTTATTTTTATCTCGGTCTCAGTGAGGAAGACGT
GACCAAGAACAAGCGGTTTCAGGCCGTCATCCGGGAGGTACGAGCCCTCG
CGACGGATAAGGTGAGAGTATGATAGTATGAGAGTATTATACTTGAGACT
AATACATTAGCAGCAGTAGTCTAGAGTGAGTACAACTGTGGTTTGAAATC
GACGTACAAGGCTATTTAATAGTACAGTATTTTTGGATCCCCCGTCCTTG
TTCTATTTTCGAATCAGTAGTAGTATGTATAGCATGCAAAATGCCTTCAT
GGGGTTTCCGGTTCAACAAGACATGGATATTTTGCTGTATGGACCCGAAA
TATTAATCTCGTTTCGGGAAGAACCCCAAAGGCGAGATATGTTTTAGTTT
GTTGTTGTTTATCTTAGCTCGATGTTTGTATCTTCCGTACGTACGGCCGA
TGAGACTCAAGGTGCTAGGTTACCAGTCCCATCTACTGTACTGCAACGTT
GCCATCCTGCCTGTGGTCGCTAGGGATCTTACCGTATCTCCCCCCGGTTA
TCACCTTCGATTTTTTTATCGCGATGCAAGTTCAGCACTCTTTCGCCTCG
CCAACCGCATCTCACAGGTTGAATTTTACATACTCGTGTTCTAACGTTTT
CCTCTACGGAAACCACAGTAAAAAATAAATGATTCTGTCAAGAATCGAAC
TCACGAATCCGCACTATTAGTAGTATTAATATCGACAAGTGAAGCTGCGA
GGATCGAGTTATCCATCATCTACACCATCGTACTCCACTCGGGCGACTGG
ATGTGGTGCTTTAGTTTTCATCTGATTGGGTGTTCGGATGTGCTGGTTTG
GTGTGATTGGTTGTGTTAATCTGGTGGTTTTTATCGAATTGGGTGGAATC
CGCCGCAAGCGTCATGATCATCGTTATTCTACGAGTAAGTTGGCTTTGAT
AGTTAATCGGTGTTTTCTCCCGACGGCTCGTGACGTGAGTGGCCGGGAAG
CTATTTTATTGGGACCTGATTGGTTTAGCTTGCGAAGGGGAAGAAAGCCG
GCAAATAGAGCAAGTGTACTACGAAGTATTATATTAATATTAGTACAGAC
GAACGTCGTCGATCGATGGATCAATCGAGATCGAAAATATTTCGTAGGCC
CCGTATGATCCCTCCCCCTCCTGCTGTACTATATACTAAACACTCTATAC
TAAGCACTTTATATTAAGCACCATATATTGTACTGGATACGTTGTACGTC
ATACGGTTTGTACTCGAAGAGAGACGAAGCCACCGGGAAAGTACTGGTGG
CCAAGGCAGACTGGGACCAGTACCGAGTGCGCATCGCCTCGAGGAACACC
TTCCCCACCGCCGCGGGTCTGGCTTCATCTGCCGCCGGGCTGGCGTGCCT
CAGTGAGTCAGTAAGTCTCTAGAGTTGTGAATACCTCTTGCGGTCCGGGG
GCGGGGCAGGAGGGGATGGGGGACGGTTAGCGTTGCCTCTCAATAGAGTA
TGTTTTGCTCGCTTGAGTCGGCCTATATATATATGAATGAATCAATGAAT
CAATGCATAGGGGCGGCGGGTGTTTCTTTTTCACGTGTTGCGTCACAGTA
CTCTACGTCTAGTTTACAGTTTACTGTACTTGAGCCAATCAGTGTCTTGG
CGGGGGGGGGGGTAAGGGGAGGCGTTCACGTTGCCTCAAGTGAGTCAAGG
TGCTGAACGCTACGTGCCTCGTTGAATCGGCGGCACAGCGTGCGCCTTCG
CCACAGACAAGAGTACGATACGGCAGGTTTTGTCATCGAGATGTACTGTG
AGAAAGCATACTCGGTGGGAGATAAAAATTGATAGATATATCTAGTCGAG
TCTGCCGGGGAGCTTGAACTTGAAGGGGTTCGTTGAGTTGCTCGTTAGGC
TGTTCATAAGTCAGGTACTGTAACATTAGTATTATAGCTGCGCGCGACAT
AGAAATACGCCTGGTTCGTGGTTTGAGATAGAAATCTTATGCTCGAGCGA
AGATATGTGTAAGATATGTGTACCAAGGTGCTGCGTGGGATTGTCCTCTA
CCGGCAGCGAGGGGGGGAGAAGGCGGAACTCCCCTCCCGCGAAAGCCTCC
TCTTGAATATGAGAACGCATCCCTCGTTTTCTGCGAACACCCCCTGTTTT
CGTTGAGGAACTCATTTGTTGGTGCGCCACACTCTTCTTCGATTTAGAGG
GGGGGGGTTGTGTTTTGTCTGCGGTTGAGCAAAATCCAGGGGTGGGCATT
TCCCCCCCCCGGATTCGTCAGTCTCCAGTTGCTGTCGCACGCCGCGTGTT
TCTGATTCTAACATGTGTTGTCCGTTTGCAGCATCCATCTATCGCAAATC
CTTAGACGGCTGCCGCTGGGCTTCTCTCCCTTCCCGTCATCTCGCCTCAT
CATATATCAATGTGGTTGCCTGCAGCCTTCTCGCTGTCCAAGCTGTTCAA
CGCGGAGGAATCGTATCCGGGGGAGCTCTCGGCGATCGCGAGGCAGGGCT
CCGGCAGCGCTTGTAGGAGGTGAGTGGGGTGGATCGAGGTGAAGGTGTCG
GAAATGTGGCAGAGGTCCTGAGGGTAGAGGAAGAATAGAAAAAAAGATGG
AGAGGGATTTAGAAAAGAGATGGAGGGGGATCTAGAAAAGGGATGGGGTT
CCAGGCTCACGTCTCTAGCCTCCTCCTGTTGATGCGTGATGCGTACGTGC
CCACCCTTCTCTAAAAAGCAAGGGATAAAAATGAAGTCCACGTACTACTT
ACACTGATGATATGATCTGGCGAGCTATCTCTCCGTCCATGTCTGTCCTT
TTCTAGGTTACTATCTGGAAGGCACTAAAAATGCAATTGGCAAAGCCATT
TATTTGCGTACACAGTTTGTCTTCAAGGCAAACACACACACACACACATG
CACATAACCACACACACACACACACACACACACACACACACACACAAAGC
AGGGGGGGGAGCACAAGGTACTCTGGGCTTAAGAAAGAATTGTACAAGTA
GAGAGAGTGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTTCGTAATAAG
TATCATTGATCCCCCCTCGGGAGGATCAATGCGAGTGACATAGAATGACT
AGGATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATACACA
CACACACATACACACGACCGGACCTTTTTCCAAATACAGACGACGCTTTG
TCTTCGCGTTTTTGCTTGTCGCCGCCGCCGCCGTATGGAAACGAAAACTG
GGCGTTTTCTGTTGGGGGTGGGGGGGGGGGCGGCGAATGGAATTCTCCAA
CCTATAAACGAAGCCTGTATGGCGGTTTCGTCAAGTGGGAGAAGGGGCAA
CGAGAGGATGCCCGGGATAGCATCGCGGTGCAGGTACTTGTACATAACTG
TTATTACTATTATTTAAGAAGTTATTTTGTGTTAGTATTATAGTACGGCT
GAACCTTCATCTTGATATTATTAGGAAAATAACAGCCACTCTCTGTCCGT
GTGTGTATGTATGTATGTGTATGTATGTATGTGTATGTATGTATGTATAT
AGAGCCATGTATCTATGTATGTATGCATCGATTTATGTACGTATGTATAT
AAGAATCTGTGTGTATATATGTAGTGTGTATGTATATAGGGCTATGTATC
TGTGTATGTTTGTATCGATTTATGTATGTATTTATGTATGTATATATGTA
GAGCGATGCATCTGTGTATGTATGTATGTAGTATGTATCTATCAAAATTT
ATATATGTACTGGTATGTGTGTATGCATGTATTTATGCAGGTATGTAGTT
GTGTATTTATTAAATTGTACATGGTCGCCCCGGTAGCTCAGAGGTACCTC
GTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATT
TTTCTCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAACGGGTG
GAGAACGATTAATTCGTTAGTACACAAAATTCGACTTCACGGTCGACGAG
GGAAAGGAAAGGCTGAATCCTTCTCGCGATAAAAATTAAGGCACGCACCG
CAGAAGGAACGTGGATTAGAAATCCTGTGTGACCATCCTCCTGTGTGACC
CCGCCTGGTACGTCCATTGATGTCCAGATTGGATGGGAAGAAAACACAAA
AAAACACACACATAGCTACGTATTCCGGCACTGTCATCGTAGTCATTCTT
ATCTATATGCCACTCGCATTGGTCCTCCCATGGAGAGACCTCTGTTAAGT
GTGTGTGTGTTTTCCGCACGTTAACCGATTGGGCCCTAACCGTACACCCT
ATTAATAGTAGCATTTACTGCTTTCCCTCCTTGCAAAAATGATGGAGGCG
TTTTCTCTTTTTATAGCTACGTATTCCGGCACTGTCATCGTAGTAATCCT
ATCTATATGCCACTCGCATTGTTCCTCCCATGGAGAGACCTCTGTTAAGT
GTGTGTGTTTTTCCGCACGTTAACCGATTGGGCCCTAACCGTACACCCTA
TTAATAGTAGCATTTACTGCTTTCCCTCCTTGCAAAAATGATGGAGGCGT
TTTCTCTTTTTATAGCTACGTATTCCGGCACTGTCATCGTAGTAATCCTA
TCTATATGCCACTCGCATTGTTCCTCCCATGGAGAGACCTCTGTTAAGTG
TGTGTGTGTTTTCCGCACGTTAACCGATTGGGCCCTAACCGTACACCCTA
TTAATAGTACCAGGTAGCATTTACTGCTTTCCCTCCTTGCAAAAATGATG
GAGGCGTTTTCTCTTTTAAGAGTTCGCGGCACACCCTACCCTATAGTAGG
CATATATAAAGACTTTGAATACTGTATATTGATAGTAGCATTTCAAGTCA
TTACTGTAGAGCTATTTATATCGATATCGATTTGTGTCGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGTGTGCAGGTGGCG
GATGAGCAGCACTGGCCGGAGATGCGAGCCTTTATCTTGGTGGCCTCCGC
TGAAAAGAAAGACACTTCTAGCACCGCGGGTGAGTCATCGTCATGCTATT
ATGCCATAATGCTATCATGCGATCGAAACGTTTGAAGAGAACGCCCCCCC
CCCCCCCCCCCCCCCTTCCCTCTCGCCGTTTGGTCATGTTGTCAAGTGAA
TTGTCAATATCAAGACATATACGGGCCCACAACTACATATTGTACCGGTA
TTAACAGCGATCTTGGAAATTGTTTGGATAAAGAGGCGTATGTTGATTGG
TCTACGGGGTTTACTGAATATACGCAGCAACCGTTACTCGAGCTACCTTG
AGGACTACTGGTCCTATACCGGCGAACTGTTGGCGGTGAACGCCGTCGGT
ACGCAAATGCGTGACCCGATAAACTCGGGACTACCCGATGGCGAAGGGAT
GAAGGAGAGGAATCTCGTGAGTAAGCATACACCAGATTCGGCCTGAGTGT
GGAGAATTAGCAGGCTAGCGCGGGACGGGACGGCCAAGCCTGTCTCGCGA
GGTCAAATTCTCAGACGCGAACGGGGACAGGGAAGAGGTGATTTTCCCTG
TTCAGCTGACCACGAACAGGATTGGCAACCTTACCCGGTTAATGCTCAGT
CTGCTATATGTGACGATAATAATTCCATACATGCACGAAGCCGTCTCGCG
AGGCCAAACTCTCAGGCGCGAACGGGACAGAGAAAGGAAAAATCCCTGTT
GAGCTGACCACGAGCAGGGTCGGAAACCATACCCGGTTGGTGCATGCTCT
GCTACGTTGTACGATGGCCGTACTAGATACATCCACGTGGAATCTTTCCG
AGTTACAGAGTGCTATGGCCTACTACTGATGCTTACACTATACTGATTTT
GGTACAATAGAGTAGTCTGTGATAATAAAGAGTTGATTTCAATTTGCGTT
TTCGGCACAGAATATTAAAATGCCAACAGAAACAAATAAATTACGTTGCC
TTGTACTGTATTGTATTAAGTGTATTTTTTGATGCCATCGGTGATACAGG
TATGTCTACAAGCGTCCAGACCAGCCCGCTCCTAGGCTTCAGGGCTAGAG
AGGTGGGTACTCACTCCAGCATCATAGTATATAATATAATGTATAATCAA
TGTACAGTACAGTAGTGTTATATACAGTAGTTTTACTTTGTATTACGTTT
ATTCATGAGTACATTTCTGGTGCCTGATGTAATATGCTGTAATATGGTTG
TCGCCCGAGTGGTCTAGTAGGAAGTTCGATTCTTGCCAAAGTAGGATTTG
TTTTCGTTCTTTCGCACGGGAAAGCGTGGGAACGTGAGTAAGTAAAATTC
AACCATTGGTTGACGAGTTGTAAGAGTGCTGAACTTGCATGGCGATAAAA
ACTAGTAGTGTAAGGCGTGAACCGGGGAGAGATGGGTAGATCCTTTGTGA
CCACAGACAGGATGATGATTATGAGGTCCATCGGCTATAAGTTGGTGCCC
CTGACGAGATCACACTGCGGAAATACGATAACATCACACAAACTGGTGTT
ACTGTATTGCTGGTGGTTACATTGTCATGTATAGTTTATGAGCCTTTTTC
TCAAAAGCATTGCAATCTTCAGTAAACCCGAGCGTCAAAATATAGCGATT
TCAAACTATTCCATCTCATCCCGTCCCGTCCTCACCACACACAACGTCTT
GCCTGAAACTAATCACATTATCCGTTGTCGCACCTGCGTTGTATCGTCAC
CTCATCACCTCATCACCTTATCTATTACTTAATAATAGTATTATGTACAG
TACACGTAACTTTTCCGTTAACTGATTTCCATTTTCATCAGGTAGTACGT
GTACTGCTGTGTACTTATGTGCATGAACTCCACTTGTCACTCTATATCCC
GAACCGCTCTACGCATACGTATGGTACCGTGTACCCACTGACTGCACTCT
ACATGCCAATCGATTTCCATTATTCAAAATACTATTCATCATTCTTCACC
CTGCAGTTGTAGCTCTAAAGCTACTGTAGGATACTACAGTATTACAGTAC
AACCGTCAGCCATCGGGGGTAAAATATTAATCACGTATCTTGTGTGCCCG
CTAAAAAAGGTCGTACCACCCCGTCTGGCGGAAATCGAGAAGGCTTACCT
CGAGAGAGACTTTGCGTCCTTCGGGAAGATCACCATGCAGGACAGCAACC
AATTCCACGCCACGTGCCTCGACACGTTCCCGCCCATATTCTACATGAAT
GATATCAGCAGGTGAAGTGACGTGACTTTTTGTGGAGAGCGTGGAGGGTA
TGTATCCATGTTTTTAGGAGGCCGTTTTGTTTGTTTTCAAGGGCGCCAGG
AGTAGCGTTTGCCGTCATATACCATATCCTAGTAAATGCGTGCTACCATT
AATGCTACCCTTGATACCATAATATGTCGAAGGTTGCTACGCGAAAGCCT
AAATAGCTCGTATCAAAGAATTGTATTGTACTTGTATTTACTACAGCAGT
AGTACTACAGTACCATACCGCAATGAGGGTCATGTCGTGCTACAGTACTT
TATATACTGTAGATATCTTGCTGAGTATTTTATTTATTTTTTGTTTTGTG
TTTCATGTGTTACAAAAAAACTGTTCATAATTTATTATAAGGTCCGTGAT
CCGGATCATCCACGCCTACAACACCTTCCACGGTGAGATTCGAGCGGCCT
ACACCTTCGACGCTGGACCGAACGCGGTGGTGTACCACCTTGCAAAGGAT
TCCGCCGATCTCTTGGCGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGA
CGGATCAGTCGAAGACAACGCCTCGCGTAGGTGGGTTGGGTACCGGTACC
TTTCTCCATAGTCTCCCGTCCGTCAAGACTCTTAACGACGTGCAACGGGT
GTATGTTTCGTGACTAATACTAAAAGTTCGTTTTGGCGTGGATAGCAAGC
CTCAGCTCTTTCATGACGAGGGACTCTGGCGGCGAGTTATTTCTTAAAAG
AACACACACACACAATAAAAGCCCGTGAAAATCGAAGCATCTCGTGGTCT
CCAATAAATATACATCAACATAAATCTTGTTGGAACGGTGTTCGTTGGAG
CTCGCGTGGGTGGGTTTTGTCTTAGCTTTAGTGAAGGTTATGCCTTGTTG
TTTTGACTTGTTTTGACTTTTTTCTCAGGTCATGGCAAGTATCGTGACGG
CCCCGAACCTCTTGTACACAGACACGCCTCTCTCTACTGAGAACTAGTTT
TAACTAATTAGTATTGGAAAGCCAATCTTGTGGAGAAAATATACTGTACA
GACAACAGAAACATTGAGAGTGGAGGGAGGGGCCATATTCTATACATTCT
ATTATTAATAGTATATGTATATATATATATATATATATTTATTATTCGCT
CAACGCGCGGGAGGCTTTTTTATCTCCGCCTGCCTCTTATGATACGGTTC
TATTTACCATAGTATTTACTGCTGGTGAGTTATATTTTTTTGGGTTCGCG
TATACCCCCAATCGACGCCGGCAGCGGTGAGTATGTGAACAACTTGGATA
TAATGAAGGAGGCGGAAGAGGCGGATGCCGCCCTTCCCGAGGGTCTCCAA
GAGGCGTGCTTGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGAT
GATTTACTACACGAAGGTACAATTTACAGTACGTCTTGTTTTCTTTCTTT
GGTACACTTCACTACGTGTCTCTCATTCGATATCCCTTTCTGGGACTTCG
TCGAGGTAGAAAGGGGAAGCACAGTTTGATGGTCGGCTGCGATCAACAAG
ACCAGGAAACAGTAGTTGGACGATTAAAGCGGTGATTGTGTTGTGTTTTC
TTCCCATCCATTCTGGACATCAAGTTGGACGTACCAGCCGGGGTCACACA
GGAGGAAGGTCACACAGGATTTTTCATCCACCTTCCTTCTGCGGTGCGTG
CCTTGATTTTTATCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGAC
CGTGAAATCAAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGTTG
GGCATTTTTATTTTGGTTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGC
CGGGATCGAACTCACGTCCCAACGTGTCAGAAGGTAACGAGGTGCCTACT
GAGCTACCGGGGTCGACCGGTGTTTGGTAGTCTTTAATCAAGTATTAGTA
CTTGTGGTACGTCTCCGCGCCACAAACTGCGACTAGCACGGTGCAATGCA
ACACGGCATAGGACAGTTGTAGCTGTGTCTTGCAATGGAACACGTGGTTT
ACGTGTCGGTACTCTAAAGAACTGTCTCTCCGTACCCCCTTTGACCACTC
TCATCCGCCGCAATGGCACCATTGTTCTACTCTCATCTTACCTTTGGACA
GACCGGTGGCTCTCCTCGAGTGTTGGGTGACGAAGAGCGCATGCTGGATC
TGGAGAGCGGAGATGCAATCTATCCCACGCCCAGTTGCTCTAATGGCACA
TCATCGTAGGAGACGAGAGAGAGTACACGCTATAGAGGGTGGCACGCAGG
GGCTGGCTATCCCCCAGTAACTTAACCGCATAGCATAGGCATCGCAACGA
CAACGGCCTCTTTCATTTATTAATAGGCATTCGAGATACAAAACATTATG
GGTCATGATGGGGGTGTTTTTCGAGGATACGGTAGAGAGCTGATGGGTTG
CGTCGGTTTTTGCAGGAATCAGCCAAATATTTCAATGTTTTGTGTGGTGT
TTTGATGAATAATGCCACGAATGCCGCCAAAAACGGCCAAAACATGTTTT
ATCCGTCTCTCTGAGAAAGTCTGAAAACTGTACTCGTACATTAGCCTCAA
AGACTATGGATGTGTATAATTTTGAATTATGTGAGTTGCGAATTTCATGC
AGCAAGTTGCGACTCCTTTTGCTTCTCGATTTCCGTAGCGGAAAAAGCGG
AAGAACGTGGGTAAGAAGCAAAAGGGTCAGACCAGTCCAGACCTTTGGTT
GACGGTGGTGGAGGAGTGTGCTGAAATCGCACAGCGAGAAAAAAACGTAT
GCGCAAGCTTGAACTGAGGAGATATGGGTAACTACTGTAGCTCTAGATCC
TCATTTACTAAATAATACCAGGTAGAGCTACTCTAGTCCATTACTATACT
ACTAATACTTGTATAATAGCTCTATATGGTCATAGTCCTCCCACATATAG
CAGACTATGGATCGACCGGGTGAGGATGCCAATCCTGATCGTGGTCAGCT
AAACAAGGAAG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1005:22496..33806- >mRNA_F-serratus_M_contig1005.150.1 ID=mRNA_F-serratus_M_contig1005.150.1|Name=mRNA_F-serratus_M_contig1005.150.1|organism=Fucus serratus male|type=CDS|length=2622bp|location=Sequence derived from alignment at F-serratus_M_contig1005:22496..33806- (Fucus serratus male) ATGGCGCCCGTGATCGACAAGCGTTTGTGCGTCACGTGCTCCGCCCCGAC CAACATCGCGGTCATCAAGTACTGGGGGAAGGACAACGTCGCCCTCAACA CTCCGATCAACTCCTCCGCCAGTGTGACGCTCTGTCAGATGGCGCCCGTG ATCGACAAGCGTTTGTGCGTCACGTGCTCCGCCCCGACCAACATCGCGGT CATCAAGTACTGGGGGAAGGACAACGTCGCCCTCAACACTCCGATCAACT CCTCCGCCAGTGTGACGCTCTGTCAGGATGACCTGAGGGCGATTACAACG GTGGCTGCGAGCAAGGAGTTTGAGAAGGACCAGCTGTGGCTCAATGGCAT GATGACCTGAGGGCGATTACAACGGTGGCTGCGAGCAAGGAGTTTGAGAA GGACCAGCTGTGGCTCAATGGCATTGAGGAAGACGTGACCAAGAACAAGC GGTTTCAGGCCGTCATCCGGGAGGTACGAGCCCTCGCGACGGATAAGTGA GGAAGACGTGACCAAGAACAAGCGGTTTCAGGCCGTCATCCGGGAGGTAC GAGCCCTCGCGACGGATAAGAGAGACGAAGCCACCGGGAAAGTACTGGTG GCCAAGGCAGACTGGGACCAGTACCGAGTGCGCATCGCCTCGAGGAACAC CTTCCCCACCGCCGCGGGTCTGGCTTCATCTGCCGCCGGGCTGGCGTGCC TCAAGAGACGAAGCCACCGGGAAAGTACTGGTGGCCAAGGCAGACTGGGA CCAGTACCGAGTGCGCATCGCCTCGAGGAACACCTTCCCCACCGCCGCGG GTCTGGCTTCATCTGCCGCCGGGCTGGCGTGCCTCACCTTCTCGCTGTCC AAGCTGTTCAACGCGGAGGAATCGTATCCGGGGGAGCTCTCGGCGATCGC GAGGCAGGGCTCCGGCAGCGCTTGTAGGAGCCTTCTCGCTGTCCAAGCTG TTCAACGCGGAGGAATCGTATCCGGGGGAGCTCTCGGCGATCGCGAGGCA GGGCTCCGGCAGCGCTTGTAGGAGCCTGTATGGCGGTTTCGTCAAGTGGG AGAAGGGGCAACGAGAGGATGCCCGGGATAGCATCGCGGTGCAGCCTGTA TGGCGGTTTCGTCAAGTGGGAGAAGGGGCAACGAGAGGATGCCCGGGATA GCATCGCGGTGCAGGTGGCGGATGAGCAGCACTGGCCGGAGATGCGAGCC TTTATCTTGGTGGCCTCCGCTGAAAAGAAAGACACTTCTAGCACCGCGGG TGGCGGATGAGCAGCACTGGCCGGAGATGCGAGCCTTTATCTTGGTGGCC TCCGCTGAAAAGAAAGACACTTCTAGCACCGCGGGTATGTCTACAAGCGT CCAGACCAGCCCGCTCCTAGGCTTCAGGGCTAGAGAGGTATGTCTACAAG CGTCCAGACCAGCCCGCTCCTAGGCTTCAGGGCTAGAGAGGTCGTACCAC CCCGTCTGGCGGAAATCGAGAAGGCTTACCTCGAGAGAGACTTTGCGTCC TTCGGGAAGATCACCATGCAGGACAGCAACCAATTCCACGCCACGTGCCT CGACACGTTCCCGCCCATATTCTACATGAATGATATCAGCAGGTCGTACC ACCCCGTCTGGCGGAAATCGAGAAGGCTTACCTCGAGAGAGACTTTGCGT CCTTCGGGAAGATCACCATGCAGGACAGCAACCAATTCCACGCCACGTGC CTCGACACGTTCCCGCCCATATTCTACATGAATGATATCAGCAGGTCCGT GATCCGGATCATCCACGCCTACAACACCTTCCACGGTGAGATTCGAGCGG CCTACACCTTCGACGCTGGACCGAACGCGGTGGTGTACCACCTTGCAAAG GATTCCGCCGATCTCTTGGCGCTTCTGCTGCGGTTCTATCCCGCTCCGGG CGACGGATCAGTCGAAGACAACGCCTCGCGTAGGTCCGTGATCCGGATCA TCCACGCCTACAACACCTTCCACGGTGAGATTCGAGCGGCCTACACCTTC GACGCTGGACCGAACGCGGTGGTGTACCACCTTGCAAAGGATTCCGCCGA TCTCTTGGCGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGACGGATCAG TCGAAGACAACGCCTCGCGTAGCGGTGAGTATGTGAACAACTTGGATATA ATGAAGGAGGCGGAAGAGGCGGATGCCGCCCTTCCCGAGGGTCTCCAAGA GGCGTGCTTGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGA TTTACTACACGAAGCGGTGAGTATGTGAACAACTTGGATATAATGAAGGA GGCGGAAGAGGCGGATGCCGCCCTTCCCGAGGGTCTCCAAGAGGCGTGCT TGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTAC ACGAAGACCGGTGGCTCTCCTCGAGTGTTGGGTGACGAAGAGCGCATGCT GGATCTGGAGAGCGGAGATGCAATCTATCCCACGCCCAGTTGCTCTAATG GCACATCATCGTAGACCGGTGGCTCTCCTCGAGTGTTGGGTGACGAAGAG CGCATGCTGGATCTGGAGAGCGGAGATGCAATCTATCCCACGCCCAGTTG CTCTAATGGCACATCATCGTAG back to top
|