prot_F-serratus_M_contig1.4.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1.4.1
Unique Name	prot_F-serratus_M_contig1.4.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	131

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig1.4.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.180e-14
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0

Query:   41 DVPEVWPFTGINERNTYNLNFVNSTTKDPLVLKNSLDTVITNNEFIGPGVLSFIGTNETRLSGNTGSPAESSPKVENSCFTPTSGVVPVC 130
            DV +V P+TGINERN  + N V  T   P+ + +S +T +++N F+G G  SF  ++ETRL  N G  A+S+P VE+SCFT  SGV P C
Sbjct:  622 DVADVEPYTGINERNFLSENNVMGTANFPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNEGGAADSTPYVEDSCFTADSGVSPEC 711

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1.4.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G261_ECTSI	1.180e-14	47.78	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 3..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1	contig	F-serratus_M_contig1:77676..79309 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1.4.1	mRNA_F-serratus_M_contig1.4.1	Fucus serratus male	mRNA	F-serratus_M_contig1 76751..79313 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1.4.1 ID=prot_F-serratus_M_contig1.4.1|Name=mRNA_F-serratus_M_contig1.4.1|organism=Fucus serratus male|type=polypeptide|length=131bp
MHGNKWGIRSLAGANDNTIEDNVFANNTMNDIMQYLGSDLDVPEVWPFTG
INERNTYNLNFVNSTTKDPLVLKNSLDTVITNNEFIGPGVLSFIGTNETR
LSGNTGSPAESSPKVENSCFTPTSGVVPVC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence