mRNA_F-serratus_M_contig12.1543.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A6H5K3C3_9PHAE (HSP40 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3C3_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.560e-67 Identity = 109/173 (63.01%), Postives = 135/173 (78.03%), Query Frame = 1
Query: 64 MSRADKFETYYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYGASLEPSSGDIIGSGAVGRLVPLALSALGAAASQFAWTVGVFSGPSWGLGCALSAGGSWFRSREMGGSSSD--SVAPAIIVGFLLGNAAGLVAGFGARGVVLLV 576
M AD FETYYSILGV +A+TEE+ KAYRR SL+VHPDKGGD AAFRRL++A+DVL+DPALR+RYDKYGA+LEPS GD+IGSG VGRLVPL+LSA G A SQF + VG + WG+GCA++AGGSW ++R + G + + S PA++ G +LGNA G GFGARG L+
Sbjct: 1 MRGADAFETYYSILGVGGTATTEEVSKAYRRVSLSVHPDKGGDPAAFRRLTKAHDVLRDPALRERYDKYGATLEPSPGDLIGSGTVGRLVPLSLSATGGAISQFLFVVGAVNASFWGVGCAVAAGGSWLKARRLEGGAGERASALPAVVGGLVLGNAVGFTVGFGARGTARLL 173
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A444GFN4_ENSVE (J domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444GFN4_ENSVE) HSP 1 Score: 84.0 bits (206), Expect = 5.420e-17 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY +LGVP SAS +E+ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YDKYG
Sbjct: 14 YYEVLGVPKSASQDELKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDKYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A7V5CJF2_9BACT (J domain-containing protein n=1 Tax=Candidatus Berkelbacteria bacterium TaxID=2053521 RepID=A0A7V5CJF2_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 3.510e-16 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYGASLEPSSG 297
YY ILGVP SAST+EI KAYRR +L HPD+GGD F+ +++AY VL DP R +YD++G++ +SG
Sbjct: 4 YYEILGVPRSASTDEIKKAYRRLALKYHPDRGGDHDKFKEINEAYQVLSDPQKRAQYDQFGSTFSGTSG 72
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A1D6KWY5_MAIZE (Chaperone protein dnaJ 3 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6KWY5_MAIZE) HSP 1 Score: 81.6 bits (200), Expect = 4.300e-16 Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY ILGVP SAS +++ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YD+YG
Sbjct: 14 YYEILGVPKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A3Q7IPL4_SOLLC (J domain-containing protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7IPL4_SOLLC) HSP 1 Score: 81.6 bits (200), Expect = 4.780e-16 Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY ILGVP +AS E++ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YD+YG
Sbjct: 14 YYEILGVPKAASQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A2G3CIR0_CAPCH (J domain-containing protein n=3 Tax=lamiids TaxID=91888 RepID=A0A2G3CIR0_CAPCH) HSP 1 Score: 80.5 bits (197), Expect = 1.210e-15 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY ILGVP +A+ E++ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YD+YG
Sbjct: 14 YYEILGVPKTAAPEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A804IY95_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804IY95_MUSAM) HSP 1 Score: 81.3 bits (199), Expect = 1.590e-15 Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY ILGVP AS E++ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YD+YG
Sbjct: 14 YYEILGVPKDASQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A4S8J439_MUSBA (J domain-containing protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8J439_MUSBA) HSP 1 Score: 84.3 bits (207), Expect = 2.410e-15 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG 273
YY ILGVP SAS +E+ KAYR+A++ HPDKGGD F+ L+QAY+VL DP R+ YDKYG
Sbjct: 14 YYEILGVPKSASQDELKKAYRKAAIRNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDKYG 74
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: E3JCF4_FRAIE (Heat shock protein DnaJ domain protein n=2 Tax=Frankia TaxID=1854 RepID=E3JCF4_FRAIE) HSP 1 Score: 81.3 bits (199), Expect = 2.430e-15 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 88 TYYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYGAS 279
T Y +LGVPPSA+ EEI AYR A+ A+HPD GG+AAAF+RL+ AY +L DPA R YD+Y A+
Sbjct: 6 TLYDLLGVPPSATAEEIRAAYRHAARALHPDAGGNAAAFQRLTTAYHILGDPAGRAGYDEYLAT 69
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Match: A0A2M7TVX7_9BACT (Chaperone protein DnaJ n=1 Tax=Candidatus Saccharibacteria bacterium CG_4_10_14_0_2_um_filter_52_9 TaxID=1974866 RepID=A0A2M7TVX7_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 2.590e-15 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 91 YYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLSQAYDVLKDPALRKRYDKYG-ASLEPSSGDIIGSG 315
YY +LG+ SAS +EI KA+RRA++A HPDKGGD + F+ +++AY+VLKD RKRYD++G A + S G G+G
Sbjct: 6 YYEVLGIDKSASADEIKKAFRRAAIANHPDKGGDESKFKEINEAYEVLKDQEKRKRYDQFGHAGVGGSGGSPFGNG 81 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig12.1543.1 >prot_F-serratus_M_contig12.1543.1 ID=prot_F-serratus_M_contig12.1543.1|Name=mRNA_F-serratus_M_contig12.1543.1|organism=Fucus serratus male|type=polypeptide|length=176bp MSRADKFETYYSILGVPPSASTEEICKAYRRASLAVHPDKGGDAAAFRRLback to top mRNA from alignment at F-serratus_M_contig12:687195..691389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig12.1543.1 ID=mRNA_F-serratus_M_contig12.1543.1|Name=mRNA_F-serratus_M_contig12.1543.1|organism=Fucus serratus male|type=mRNA|length=4195bp|location=Sequence derived from alignment at F-serratus_M_contig12:687195..691389+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig12:687195..691389+ >mRNA_F-serratus_M_contig12.1543.1 ID=mRNA_F-serratus_M_contig12.1543.1|Name=mRNA_F-serratus_M_contig12.1543.1|organism=Fucus serratus male|type=CDS|length=1056bp|location=Sequence derived from alignment at F-serratus_M_contig12:687195..691389+ (Fucus serratus male)back to top |