mRNA_F-serratus_M_contig12.1538.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig12.1538.1
Unique NamemRNA_F-serratus_M_contig12.1538.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 8.140e-93
Identity = 180/291 (61.86%), Postives = 209/291 (71.82%), Query Frame = 1
Query:   43 EEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEP--------APALEETKGLAVKSDN--------------QLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNK------QAESRSESPFAASAAAMFKE--SEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
            EEG+EFSW G+E LA  HDLCA GPAF  AI   + +  G  + +FRVLARMTP LKEELAT+LMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANT++  S  P            +++K   VKS                ++ KE++E+VQA+ITEEF+RLR EGV+ AKA+WKAS  A  K      Q +  S   FAASA AM K+  S+G E   G+V+ GDASLAAPFTSKKPSI AV+DVVRQGRCTLAAVLHTYQMVAL ALFSSYT+SVLYLM+VR
Sbjct:  232 EEGIEFSWGGMEGLAATHDLCATGPAFALAIGEEDPA-MGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSEAPLLTSDSDGGATTDKSKDETVKSGGGGARAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQRKKASHGDFAASAVAMLKDADSDGPEGADGVVKTGDASLAAPFTSKKPSIVAVVDVVRQGRCTLAAVLHTYQMVALHALFSSYTSSVLYLMKVR 521          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 3.510e-87
Identity = 179/294 (60.88%), Postives = 210/294 (71.43%), Query Frame = 1
Query:   43 EEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAP-----ALEETKG-----------------LAVKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNK------QAESRSESPFAASAAAMFK-----ESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
            ++G+EFSW G+E LA  HDLCA GPAF  A+   + +  G  + +FRVLARMTP LKEELAT+LMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANT++  S  P+      A  + KG                 L  K+  ++ KE++E+VQA+ITEEF+RLR EGV+ AKA+WKAS  A  K      Q +  S   FAASA AMFK     E EGA+   G+V+ GDASLAAPFTSKKPSI AV+D VRQGRCTLAAVLHTYQMVAL ALFSSYT+SVLYLM+VR
Sbjct: 1159 DKGIEFSWGGMEGLAATHDLCATGPAFALALGEEDPA-LGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSESPSVTSDGGATTKNKGKDETVKSGGGGGDRAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQQKKASHGDFAASAVAMFKDTDTDEQEGAD---GVVKTGDASLAAPFTSKKPSIVAVVDAVRQGRCTLAAVLHTYQMVALHALFSSYTSSVLYLMKVR 1448          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S0Z5X7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z5X7_9CRYP)

HSP 1 Score: 150 bits (380), Expect = 2.490e-38
Identity = 107/284 (37.68%), Postives = 160/284 (56.34%), Query Frame = 1
Query:   52 LEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAP-ALEETKGLAVKSDNQLRKEKQERVQAEITEEFERL-----------------RGEG----VSAAKAIWKASQKARNKQAESRS----ESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
            L+F   G+  LA  +DLC  GP+ +AA+     +     V +  + ARM+P  KE +   L + G   LMCGDG+NDVGAL+++HVGLALLSGFG ANT +      A   L E K   V    ++  ++Q+ VQ E+  +   +                 RGE      + A+++ + + + R +QAE ++    ++PF A AA +   ++G +  V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + +   Q++AL  L S+Y+ S LYL  VR
Sbjct:    4 LKFDPRGIAKLAEEYDLCVTGPSLQAAVDQDEAT--WDQVGHIGIFARMSPDDKEAVLRALKQQGSHTLMCGDGANDVGALKQAHVGLALLSGFGGANTAKAGEKTTADMTLTEKKDFMVAEAKRMA-DRQKAVQEEVKRDKHEMNEWQKVRLPQIIAELEARGESWVQFKALAQSVKEMNAEMRRRQAERQAKMGGDNPFTAHAAMLAGGADGEDGTVPMVKLGDASVAAPFTSKLPSIRSCVDIVRQGRCTLVSTIQMQQVLALNCLISAYSLSALYLDGVR 284          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S1E5S3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5S3_HEMAN)

HSP 1 Score: 146 bits (368), Expect = 1.420e-36
Identity = 110/282 (39.01%), Postives = 154/282 (54.61%), Query Frame = 1
Query:   58 FSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAPA---------LEETKGLA---------VKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKA--------SQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
            F   G++ LA  +DLC  GP+ +AA+     +     V   R+ ARM+P  KE +   L + G   LMCGDG+NDVGAL+++HVGLALLSGFG ANT +      A           + E K +A         VK D    +E Q+R   EI  E ER RGE     KA+ +          ++ + +QA+    + F A AA +    +G +  V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + +   Q++AL  L S+Y+ + LYL  VR
Sbjct:    2 FDAVGIKKLAKEYDLCVTGPSLQAAVDADERTWLS--VGEIRIFARMSPDDKEGVLRALKQQGAHTLMCGDGANDVGALKQAHVGLALLSGFGGANTAKAGEKATAEMTMTEKKEHIMAEAKKMADKQKAMNEEVKKDKAELQEWQKRRLPEIIAEMER-RGESWVQFKALKQTVSEMNAEMRRRQQERQAKMGGNNAFTAHAA-LLAGGDGEDGQVPMVKLGDASVAAPFTSKLPSIRSCMDIVRQGRCTLVSTIQMQQVLALNCLISAYSLAALYLDGVR 279          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A9V7V1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7V1_MONBE)

HSP 1 Score: 146 bits (368), Expect = 6.560e-36
Identity = 111/267 (41.57%), Postives = 148/267 (55.43%), Query Frame = 1
Query:   73 VEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAPALE-ETKGLA--VKSDNQLRKEKQERV------------QAEITEEFERLRGEGVSAAKAIWKASQ----KARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
            VE +A    L   G    A   L +  DA   + + RV ARMTP  KE L T L +     LMCGDG+NDVGAL+++HVG+ALL GFG AN  +     PAP  + E K +A   K D+  +   +++             +AE   + +  +  G S A+  WKA Q    K R +Q  +R       SAA M   +E  EDG V +V+ GDAS+AAPFTSKKPSI++ +D++R GRCTL   L  YQ++AL  L SSY+ SVLYL
Sbjct:  845 VEKIALNRTLAMTGSVMMAL--LEHVPDAKYMLPHIRVYARMTPGHKELLITTLKDQEHFTLMCGDGANDVGALKQAHVGIALLCGFGSANAEK----PPAPVQQPEKKAIADAQKQDDATKLTPRQKAAQQAESCLVQEDKAEFMRDVQERKARGESWAE--WKAMQAMWAKQRARQMANRKNGTLTGSAALMA--AEDLEDGSVPMVKLGDASVAAPFTSKKPSISSAIDIIRMGRCTLVTTLQMYQILALNCLISSYSLSVLYL 1101          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3CA63_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CA63_9CHLO)

HSP 1 Score: 144 bits (364), Expect = 2.230e-35
Identity = 115/305 (37.70%), Postives = 163/305 (53.44%), Query Frame = 1
Query:   55 EFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFE-------PAPALEETK-------GLAVKSDNQLRK--EKQERVQAE-----------------------------ITEEFERLR--GEGVSAAKA----IWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
            +F   G+  LA  +DLC  G   + A  +  G D G+ +  F+V ARM P  KE++ +VL     T LMCGDG+NDVGALR++HVG+ALLSGFG  N ++  + E         P+ E++K       G   K   Q+++  EK + +Q E                             +  E  RL+  GE  ++ KA    + K  Q+++ K A++     FA SAAA+    EG EDG + +++ GDAS AAPFTSK PSI +V D+VRQGRCTL   +   Q++ L +L SSY+ SVLYL
Sbjct:  782 DFDLSGMHGLAKDNDLCITGKVLQHAFGMY-GDDLGQVLHLFKVFARMAPENKEKVLSVLNNLKMTTLMCGDGANDVGALRQAHVGVALLSGFGSLNADKGGTDEGKSDTGKDLPSEEDSKTEEDKPLGFFEKLQKQMKEAEEKAKIIQEERAKRTEDLXXXXXXXXXXXXXXXXXXMKDVEAETRRLQEMGESFASVKAMKNVVKKYQQESKQKVADAGGS--FAFSAAALAAREEGLEDGELPMLKLGDASNAAPFTSKFPSIRSVYDIVRQGRCTLVTSVQNNQIMVLTSLISSYSLSVLYL 1083          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A0L0DKD0_THETB (P-type ATPase superfamily n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DKD0_THETB)

HSP 1 Score: 144 bits (363), Expect = 3.070e-35
Identity = 112/287 (39.02%), Postives = 146/287 (50.87%), Query Frame = 1
Query:   82 LAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ---------------------------------MASFEPAPA-LEETKGLAVKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWK------ASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVG---LVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
            LA   DL   G +    +       A   + YF+V ARMTP LKE++   L ++G   LMCGDG+NDVGAL+++HVGLALLSGFG+AN                                    +A  E  PA +   K  A K+       K   V+A I    E   GE ++  K  W       AS KA+   A +R    FA SAA +  + + +E G G   +V+ GDAS+A+PFTSKKPSI   +DV+RQGRCTL   L  YQ++AL  L SSY+ SVLYL
Sbjct:  904 LAVGADLAITGASLAELVEAVPDGAAWPAMVYFKVFARMTPELKEKVLAALKDSGHFTLMCGDGANDVGALKQAHVGLALLSGFGNANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAKPELTPAEIAAKKAEAAKAKQAEYAAKMAEVEANIRARSEA--GESMATVKEWWAFIQRETASAKAK---ASARKPKTFAESAALLAAQDDLSEGGGGEIPMVKLGDASIASPFTSKKPSIRGAVDVIRQGRCTLVTTLQMYQILALSCLISSYSLSVLYL 1185          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A5B8MN92_9CHLO (P-type cation-transporting ATPase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MN92_9CHLO)

HSP 1 Score: 144 bits (363), Expect = 3.080e-35
Identity = 112/305 (36.72%), Postives = 163/305 (53.44%), Query Frame = 1
Query:   55 EFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ------MASFEPAPALEETK--------GLAVKSDNQLRK--EKQERVQAEITE-----------------------------EFERLRGEGVSAAK------AIWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
            +F   GVE+LA  +DLC +G   + A    +G D G+ +  F+V ARM P  KE++ +VL     T LMCGDG+NDVGALR++HVG+ALLSGFG  NT++                +E+K        G   +   Q+++  EK + +Q E  +                             E +RL+  G S A+       + K  Q+++ K A++     FA SAAA+    +G EDG + +++ GDAS+AAPFTSK PSI +V D++RQGRCTL   +   Q++ L +L SSY+ SVLYL
Sbjct:  912 DFDLSGVEELAKDNDLCVSGKVLQYAFD-KHGDDLGQALHLFKVFARMAPENKEKVLSVLNNRNMTTLMCGDGANDVGALRQAHVGVALLSGFGSLNTDKGNKDXXXXXXXXXXGKDESKEKEDAGQLGFFDRIQKQMKEAEEKAKVIQQERAKNADEXXXXXXXXXXXXXXXXXXXXXXXEAETKRLQEMGESFAQFKAMKNVVKKYQQESKQKVADAGGS--FAFSAAALAAREDGLEDGELPMLKLGDASIAAPFTSKFPSIRSVYDIIRQGRCTLVTSVQNNQIMVLTSLISSYSLSVLYL 1213          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3UVI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI2_HETAK)

HSP 1 Score: 139 bits (351), Expect = 5.710e-34
Identity = 103/254 (40.55%), Postives = 146/254 (57.48%), Query Frame = 1
Query:   76 EDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQM------ASFEPAPALEE-TKGLA--VKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLY 810
            E L   ++LC  G A +  ++     +  + + Y +V ARM+P LKE+L   L EAG+TVLMCGDG+ND+GAL+++ VGLALL GFGD NT          + EP  A  + +K LA   +    ++K K+E + AE+ E  ++   E +  A+ + K +  A   Q    S+   AASAA   K S+  +D    +  G ASLAAPFTS KPSI++V D+VRQGRCT   ++  YQ+  L AL + Y   VLY
Sbjct:  146 EILQRRNNLCIMGSALKVLLK---DPEDRKHLHYVKVFARMSPELKEKLCFYLKEAGQTVLMCGDGANDIGALKQADVGLALLGGFGDENTGNQNNNGNATTEEPKGAFHQFSKTLADLTEQAQDMKKRKEEAIVAEVQEMMKK--NETIDMAQLVKKVN--AAEFQRIMNSKKGVAASAAKDLKRSD--DDQQAGIELGAASLAAPFTSTKPSISSVADLVRQGRCTQVNLMELYQISTLEALMTIYGMIVLY 390          
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3F7A3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7A3_9VIRI)

HSP 1 Score: 138 bits (348), Expect = 3.080e-33
Identity = 106/266 (39.85%), Postives = 153/266 (57.52%), Query Frame = 1
Query:   97 DLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ-----MASFEP----APALE---ETKGLAVKSDNQLRKEKQER-------VQAEITEEFERLRG-EGVSAAKAIWK---ASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
            DLC  GP+F AA+     + A   VQ+ +V ARM P  KE +   + E G   LMCGDG+NDVGAL+++HVG+ALLSGF  ANT +     +    P    A ALE   + K  A+K+  +  K+K+E         +AE+ +E ++      V+A K   +   A QK R  +  ++     A  AA + +++EG    V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + +   Q++AL  L ++Y+ S LYL  VR
Sbjct:  943 DLCMTGPSFRAAVAADEATLA--HVQHVKVYARMAPEDKETVLRSMREHGLHTLMCGDGANDVGALKQAHVGVALLSGFAGANTTKAGEKALEDMTPEEHKAKALEIQTKAKERAIKARIEAEKDKKELQEMQKVVYEAELKKETDKGNAWAAVTAMKTATQHIMAEQKRRIAERRAKYGGGLAGQAAMLTEDAEGE---VPMVKLGDASVAAPFTSKLPSITSTVDIVRQGRCTLVSSVQMQQVLALNCLITAYSLSALYLDGVR 1203          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDZ3_9PHAE8.140e-9361.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFD5_ECTSI3.510e-8760.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0Z5X7_9CRYP2.490e-3837.68Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1E5S3_HEMAN1.420e-3639.01Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A9V7V1_MONBE6.560e-3641.57Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S3CA63_9CHLO2.230e-3537.70Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A0L0DKD0_THETB3.070e-3539.02P-type ATPase superfamily n=1 Tax=Thecamonas trahe... [more]
A0A5B8MN92_9CHLO3.080e-3536.72P-type cation-transporting ATPase n=2 Tax=Chloropi... [more]
A0A7S3UVI2_HETAK5.710e-3440.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3F7A3_9VIRI3.080e-3339.85Hypothetical protein n=1 Tax=Prasinoderma singular... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:489119..492336 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score292.4
Seed ortholog evalue2.3e-76
Seed eggNOG ortholog2880.D8LFD5
KEGG koko:K14950
KEGG TC3.A.3.10
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001709,GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008324,GO:0009267,GO:0009555,GO:0009605,GO:0009846,GO:0009856,GO:0009888,GO:0009987,GO:0009991,GO:0010073,GO:0010152,GO:0012505,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016036,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0021700,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030154,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0034220,GO:0042592,GO:0042594,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044706,GO:0045165,GO:0046873,GO:0048229,GO:0048507,GO:0048856,GO:0048863,GO:0048865,GO:0048867,GO:0048869,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071496,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099131,GO:0099132
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0209@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons6
Model size829
Cds size825
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1538.1prot_F-serratus_M_contig12.1538.1Fucus serratus malepolypeptideF-serratus_M_contig12 489121..492336 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929103.7193422-CDS-F-serratus_M_contig12:489120..4892201622929103.7193422-CDS-F-serratus_M_contig12:489120..489220Fucus serratus maleCDSF-serratus_M_contig12 489121..489220 -
1690962706.4814901-CDS-F-serratus_M_contig12:489120..4892201690962706.4814901-CDS-F-serratus_M_contig12:489120..489220Fucus serratus maleCDSF-serratus_M_contig12 489121..489220 -
1622929103.7303607-CDS-F-serratus_M_contig12:490059..4901481622929103.7303607-CDS-F-serratus_M_contig12:490059..490148Fucus serratus maleCDSF-serratus_M_contig12 490060..490148 -
1690962706.4966602-CDS-F-serratus_M_contig12:490059..4901481690962706.4966602-CDS-F-serratus_M_contig12:490059..490148Fucus serratus maleCDSF-serratus_M_contig12 490060..490148 -
1622929103.7413924-CDS-F-serratus_M_contig12:490706..4908891622929103.7413924-CDS-F-serratus_M_contig12:490706..490889Fucus serratus maleCDSF-serratus_M_contig12 490707..490889 -
1690962706.5046635-CDS-F-serratus_M_contig12:490706..4908891690962706.5046635-CDS-F-serratus_M_contig12:490706..490889Fucus serratus maleCDSF-serratus_M_contig12 490707..490889 -
1622929103.7522297-CDS-F-serratus_M_contig12:491132..4913251622929103.7522297-CDS-F-serratus_M_contig12:491132..491325Fucus serratus maleCDSF-serratus_M_contig12 491133..491325 -
1690962706.5144472-CDS-F-serratus_M_contig12:491132..4913251690962706.5144472-CDS-F-serratus_M_contig12:491132..491325Fucus serratus maleCDSF-serratus_M_contig12 491133..491325 -
1622929103.7707756-CDS-F-serratus_M_contig12:491822..4919181622929103.7707756-CDS-F-serratus_M_contig12:491822..491918Fucus serratus maleCDSF-serratus_M_contig12 491823..491918 -
1690962706.531154-CDS-F-serratus_M_contig12:491822..4919181690962706.531154-CDS-F-serratus_M_contig12:491822..491918Fucus serratus maleCDSF-serratus_M_contig12 491823..491918 -
1622929103.7841218-CDS-F-serratus_M_contig12:492172..4923361622929103.7841218-CDS-F-serratus_M_contig12:492172..492336Fucus serratus maleCDSF-serratus_M_contig12 492173..492336 -
1690962706.5399187-CDS-F-serratus_M_contig12:492172..4923361690962706.5399187-CDS-F-serratus_M_contig12:492172..492336Fucus serratus maleCDSF-serratus_M_contig12 492173..492336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig12.1538.1

>prot_F-serratus_M_contig12.1538.1 ID=prot_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=polypeptide|length=275bp
KKSSRRVTSRTKNAEEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNG
SDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRR
SHVGLALLSGFGDANTNQMASFEPAPALEETKGLAVKSDNQLRKEKQERV
QAEITEEFERLRGEGVSAAKAIWKASQKARNKQAESRSESPFAASAAAMF
KESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLH
TYQMVALRALFSSYTNSVLYLMRVR
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mRNA from alignment at F-serratus_M_contig12:489119..492336-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig12.1538.1 ID=mRNA_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=mRNA|length=3218bp|location=Sequence derived from alignment at F-serratus_M_contig12:489119..492336- (Fucus serratus male)
AAGAAGTCCAGCAGACGAGTGACATCCAGGACAAAGAACGCCGAGGAAGG CCTGGAGTTCTCTTGGGAAGGGGTTGAGGATCTGGCTTGGGCTCACGACC TGTGCGCTAACGGGCCGGCATTCGAGGCAGCGATTCGGTTGTCAAACGGG AGCGACGCAGGGAGGTGGGTTTGTGCGTGGAGGGCTCTCGATGCAAGACA CGGGAGTTCCCACTTTCGGAAGGCGGTTGTTTTTTATTTTATTTTATTTG CCCGCGCGATAGTTTGGTTTGGTTTGGCTTGAGAGAGGCCTGCTTTTGTA GAAGGCATGTCGAGGGGGAAGTAACCTTTATCAGCGGGGGCTGTCGAGCT GAGGTGACGAGTTTTTATACTTGCCCGTTTGGCGCTTGCCCGTTTTTATG ACCCTGGCTCGCGCATAGGTTCGTGCAGTACTTCCGGGTGCTGGCCAGGA TGACTCCGGCGCTAAAAGAAGAGTTGGCCACCGTCCTCATGGAGGCTGGG AAAACCGTGCTAATGTGAGACAAAATTGACACAGTCCATCGCGCTGAGGA TGTGATCCACTCATTCCAGCGTACCATGAGCTTACCCTCTTCTTCTAAGG TACCAGCAACTCAACCCATATGTCGCTGCGTGCTCCGTTTAAGATCGGCC CTATTATGGATCATTTCCAGGCAGTCTCTGGGGTTGAGAGGTGTCGCTTA AGGCGCCAGCCATGAAAGAGCGTGCCCAGTTATTGTACAATCGAGTGTGT TCAATTTTTCGCCGACGATAAATACTATGATACAACGAGTGTACCATCAA TGATATTAAGACAAAAAAACATCCTTCGAGCTGAATAAAAAAAACTTGGT TAAACAGCAAGATTGGCACCACAAGGAATCATTGCAACACAGTAGTTAAA CCGTAGGGTGATGGCTTAGTTGCTATACAACTGTAGGCGCAGTACTCGTT TTGCACCAGCTAATCTATAAGGGATTCCACTAAATTCGGTGGCGTTTTTC CTTTCCTTCAGGTGCGGGGACGGCTCCAACGACGTGGGCGCCTTAAGGCG GTCACACGTAGGGCTCGCGCTCCTGAGCGGCTTCGGAGACGCCAACACCA ATCAGATGGCATCCTTCGAACCGGCGCCGGCGCTCGAAGAGACCAAGGGG TTGGCTGTCAAGAGCGACAATCAGCTTCGCAAAGAGAAGCAAGAGAGGGT TCAGGTCAGGTCACGTGGTAAAGTCTGTTTTGGTACATTGTTTTCATGCA ATGTTGAAACTTCAAGGCTTGCCGTGACTTGTCCTGGAAACAAAACACAC AAAGTGAAAAAAAAAGTGTTACTTTGACCGCCTTCCTTGTAAGTACTTTT TTCTGTTCGGCGTTTAAACAATAGCTTTAACTATGTTCCTTCCAGAAGTC CCCGGCCATTGTTTTCCCGCCCCCGTCCCCGCACTTGGTCCTCGCAGGCC GAAATCACCGAGGAGTTCGAGCGCTTGCGAGGCGAAGGTGTTAGCGCCGC CAAGGCCATATGGAAAGCCTCGCAGAAGGCCCGCAACAAGCAGGCGGAAT CACGCTCCGAGAGTCCCTTCGCTGCTAGCGCGGCCGCCATGTTCAAGGAA TCAGAGGGAGCGGAGGATGGAGTCGGACTGGTAAGACAACATCTGACTCG ATCCCGAACACGGGTATTGATCAAGCAGTTTTTTTTTTGTTTTTTTTTGT CACGGCAACTTGGTCCCACGCCGTGAGTTCGACGGTTTTTCGCGGAGAAA ATCGAAGCGAAACCTGCGCAACGCCTCCTTCTTTGTCAAAGTATCTTGTC CTCAACAAACAAGCTGTACAATAGTAAAACAGAGTTCACTGTGTTGCTTC CGCGTCGAAGATTTCGTGATCCGCCCTCAACAAACTAACGTATATTTATG CGTATTGCACCAGATGCTGGCGTAAAGTGTTTAGGTATTATTTGCCTGTT TCACAAAATTATCTCACACATGTGTTATACGACGAAGGTACCATGCTATA CGACGAAGTATTAGTTCGCAATTTATCATATATATACTGCATTGCAAACT ACTTGCGTATGTTATCGTCGTATAGCATGTTTGATCTACGTTACATCTAT CGGGTCAAGCTCGAAAGACTCTGATAATCATAACTCATGATACAGTACCA ACCCATTAGACTATATGATCCTGCTTGTATATATGCAGGTGCGGGCCGGG GATGCGTCCTTAGCGGCCCCCTTCACCTCCAAGAAGCCCAGCATCGCGGC GGTGTTGGACGTCGTACGCCAAGGAAGGTTTGCCATTATGTCATTATCTC AGCTGAGGACACGCCTTTCCATCGCCCTCCGTCCATCCAACATCATTTTA ACCAGTATGAATGACTGTATTGTACTATGAATAGTACTCTATGCATGCCC GCTACTTGATGCCAATATTACTATATAATAGTATAGAGGGGGTGGGAAAA GAGAGGTGCACATTAATTGGTCCATAGTGATCTGCAAAGGCAGCTCCCGT TATTGGAACTACCTTGAGGACTATGACAACTGGCCCTGTGCCGGCGGACT CTCAGCTGTGAACGCCATCGCGAATACCTGACCTGATAAACTCTTGACTG ACGCGATGGCGTTTGGCGATATAAAAAATAGACGCCGCCGCGGAAATCGG GAGGAATCCCGTGAGTAAGCACCAGATTCAGCCCGAGTGTGAAGAATGAG CAGGCTGACGCGGGACGGGACGGCGGAACCCACCTCGCGAGAACCAAACT CTCAGGCACGAAGGAGGATAAGGAAGCATGATTTTTCCTCTCCAGCTAAT CACGAGCAGGATTGGCAACCTTACTTGGTGGATCTATTCAATACTCAGCT GAAAGTGCTAACCATACATAATACGTGGGCTTCAACCTCGAAAAGCGTTT TTTGGATTCACCCGACCGAGTGGATCGACCTTACCCCTCGAGCAGGCTTA TCGACGACATTGCCAATTTGATAATAGTGGACCACTCACGTCCACGGTCG AGGCCCGTCATTGTTTGCCGACTAATCATGATCATAATGTGATAATATGT GTGATGATCTGCAATTGCTTGCTGGCCTGCTTCGCTTCGCGCTTTCTTCC GCGGGGGCATGCACAGGTGCACCCTAGCGGCGGTCCTTCACACCTATCAG ATGGTAGCCTTACGTGCGCTGTTCAGCTCCTACACCAACTCTGTGCTGTA CCTTATGAGGGTCAGGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig12:489119..492336-

>mRNA_F-serratus_M_contig12.1538.1 ID=mRNA_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig12:489119..492336- (Fucus serratus male)
AAGAAGTCCAGCAGACGAGTGACATCCAGGACAAAGAACGCCGAGGAAGG
CCTGGAGTTCTCTTGGGAAGGGGTTGAGGATCTGGCTTGGGCTCACGACC
TGTGCGCTAACGGGCCGGCATTCGAGGCAGCGATTCGGTTGTCAAACGGG
AGCGACGCAGGGAGAAGAAGTCCAGCAGACGAGTGACATCCAGGACAAAG
AACGCCGAGGAAGGCCTGGAGTTCTCTTGGGAAGGGGTTGAGGATCTGGC
TTGGGCTCACGACCTGTGCGCTAACGGGCCGGCATTCGAGGCAGCGATTC
GGTTGTCAAACGGGAGCGACGCAGGGAGGTTCGTGCAGTACTTCCGGGTG
CTGGCCAGGATGACTCCGGCGCTAAAAGAAGAGTTGGCCACCGTCCTCAT
GGAGGCTGGGAAAACCGTGCTAATGTTCGTGCAGTACTTCCGGGTGCTGG
CCAGGATGACTCCGGCGCTAAAAGAAGAGTTGGCCACCGTCCTCATGGAG
GCTGGGAAAACCGTGCTAATGTGCGGGGACGGCTCCAACGACGTGGGCGC
CTTAAGGCGGTCACACGTAGGGCTCGCGCTCCTGAGCGGCTTCGGAGACG
CCAACACCAATCAGATGGCATCCTTCGAACCGGCGCCGGCGCTCGAAGAG
ACCAAGGGGTTGGCTGTCAAGAGCGACAATCAGCTTCGCAAAGAGAAGCA
AGAGAGGGTTCAGGTGCGGGGACGGCTCCAACGACGTGGGCGCCTTAAGG
CGGTCACACGTAGGGCTCGCGCTCCTGAGCGGCTTCGGAGACGCCAACAC
CAATCAGATGGCATCCTTCGAACCGGCGCCGGCGCTCGAAGAGACCAAGG
GGTTGGCTGTCAAGAGCGACAATCAGCTTCGCAAAGAGAAGCAAGAGAGG
GTTCAGGCCGAAATCACCGAGGAGTTCGAGCGCTTGCGAGGCGAAGGTGT
TAGCGCCGCCAAGGCCATATGGAAAGCCTCGCAGAAGGCCCGCAACAAGC
AGGCGGAATCACGCTCCGAGAGTCCCTTCGCTGCTAGCGCGGCCGCCATG
TTCAAGGAATCAGAGGGAGCGGAGGATGGAGTCGGACTGGCCGAAATCAC
CGAGGAGTTCGAGCGCTTGCGAGGCGAAGGTGTTAGCGCCGCCAAGGCCA
TATGGAAAGCCTCGCAGAAGGCCCGCAACAAGCAGGCGGAATCACGCTCC
GAGAGTCCCTTCGCTGCTAGCGCGGCCGCCATGTTCAAGGAATCAGAGGG
AGCGGAGGATGGAGTCGGACTGGTGCGGGCCGGGGATGCGTCCTTAGCGG
CCCCCTTCACCTCCAAGAAGCCCAGCATCGCGGCGGTGTTGGACGTCGTA
CGCCAAGGAAGGTGCGGGCCGGGGATGCGTCCTTAGCGGCCCCCTTCACC
TCCAAGAAGCCCAGCATCGCGGCGGTGTTGGACGTCGTACGCCAAGGAAG
GTGCACCCTAGCGGCGGTCCTTCACACCTATCAGATGGTAGCCTTACGTG
CGCTGTTCAGCTCCTACACCAACTCTGTGCTGTACCTTATGAGGGTCAGG
GTGCACCCTAGCGGCGGTCCTTCACACCTATCAGATGGTAGCCTTACGTG
CGCTGTTCAGCTCCTACACCAACTCTGTGCTGTACCTTATGAGGGTCAGG
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