mRNA_F-serratus_M_contig12.1538.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE) HSP 1 Score: 299 bits (765), Expect = 8.140e-93 Identity = 180/291 (61.86%), Postives = 209/291 (71.82%), Query Frame = 1
Query: 43 EEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEP--------APALEETKGLAVKSDN--------------QLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNK------QAESRSESPFAASAAAMFKE--SEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
EEG+EFSW G+E LA HDLCA GPAF AI + + G + +FRVLARMTP LKEELAT+LMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANT++ S P +++K VKS ++ KE++E+VQA+ITEEF+RLR EGV+ AKA+WKAS A K Q + S FAASA AM K+ S+G E G+V+ GDASLAAPFTSKKPSI AV+DVVRQGRCTLAAVLHTYQMVAL ALFSSYT+SVLYLM+VR
Sbjct: 232 EEGIEFSWGGMEGLAATHDLCATGPAFALAIGEEDPA-MGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSEAPLLTSDSDGGATTDKSKDETVKSGGGGARAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQRKKASHGDFAASAVAMLKDADSDGPEGADGVVKTGDASLAAPFTSKKPSIVAVVDVVRQGRCTLAAVLHTYQMVALHALFSSYTSSVLYLMKVR 521
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI) HSP 1 Score: 293 bits (751), Expect = 3.510e-87 Identity = 179/294 (60.88%), Postives = 210/294 (71.43%), Query Frame = 1
Query: 43 EEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAP-----ALEETKG-----------------LAVKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNK------QAESRSESPFAASAAAMFK-----ESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
++G+EFSW G+E LA HDLCA GPAF A+ + + G + +FRVLARMTP LKEELAT+LMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANT++ S P+ A + KG L K+ ++ KE++E+VQA+ITEEF+RLR EGV+ AKA+WKAS A K Q + S FAASA AMFK E EGA+ G+V+ GDASLAAPFTSKKPSI AV+D VRQGRCTLAAVLHTYQMVAL ALFSSYT+SVLYLM+VR
Sbjct: 1159 DKGIEFSWGGMEGLAATHDLCATGPAFALALGEEDPA-LGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSESPSVTSDGGATTKNKGKDETVKSGGGGGDRAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQQKKASHGDFAASAVAMFKDTDTDEQEGAD---GVVKTGDASLAAPFTSKKPSIVAVVDAVRQGRCTLAAVLHTYQMVALHALFSSYTSSVLYLMKVR 1448
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S0Z5X7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z5X7_9CRYP) HSP 1 Score: 150 bits (380), Expect = 2.490e-38 Identity = 107/284 (37.68%), Postives = 160/284 (56.34%), Query Frame = 1
Query: 52 LEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAP-ALEETKGLAVKSDNQLRKEKQERVQAEITEEFERL-----------------RGEG----VSAAKAIWKASQKARNKQAESRS----ESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
L+F G+ LA +DLC GP+ +AA+ + V + + ARM+P KE + L + G LMCGDG+NDVGAL+++HVGLALLSGFG ANT + A L E K V ++ ++Q+ VQ E+ + + RGE + A+++ + + + R +QAE ++ ++PF A AA + ++G + V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + + Q++AL L S+Y+ S LYL VR
Sbjct: 4 LKFDPRGIAKLAEEYDLCVTGPSLQAAVDQDEAT--WDQVGHIGIFARMSPDDKEAVLRALKQQGSHTLMCGDGANDVGALKQAHVGLALLSGFGGANTAKAGEKTTADMTLTEKKDFMVAEAKRMA-DRQKAVQEEVKRDKHEMNEWQKVRLPQIIAELEARGESWVQFKALAQSVKEMNAEMRRRQAERQAKMGGDNPFTAHAAMLAGGADGEDGTVPMVKLGDASVAAPFTSKLPSIRSCVDIVRQGRCTLVSTIQMQQVLALNCLISAYSLSALYLDGVR 284
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S1E5S3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5S3_HEMAN) HSP 1 Score: 146 bits (368), Expect = 1.420e-36 Identity = 110/282 (39.01%), Postives = 154/282 (54.61%), Query Frame = 1
Query: 58 FSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAPA---------LEETKGLA---------VKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKA--------SQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
F G++ LA +DLC GP+ +AA+ + V R+ ARM+P KE + L + G LMCGDG+NDVGAL+++HVGLALLSGFG ANT + A + E K +A VK D +E Q+R EI E ER RGE KA+ + ++ + +QA+ + F A AA + +G + V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + + Q++AL L S+Y+ + LYL VR
Sbjct: 2 FDAVGIKKLAKEYDLCVTGPSLQAAVDADERTWLS--VGEIRIFARMSPDDKEGVLRALKQQGAHTLMCGDGANDVGALKQAHVGLALLSGFGGANTAKAGEKATAEMTMTEKKEHIMAEAKKMADKQKAMNEEVKKDKAELQEWQKRRLPEIIAEMER-RGESWVQFKALKQTVSEMNAEMRRRQQERQAKMGGNNAFTAHAA-LLAGGDGEDGQVPMVKLGDASVAAPFTSKLPSIRSCMDIVRQGRCTLVSTIQMQQVLALNCLISAYSLAALYLDGVR 279
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A9V7V1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7V1_MONBE) HSP 1 Score: 146 bits (368), Expect = 6.560e-36 Identity = 111/267 (41.57%), Postives = 148/267 (55.43%), Query Frame = 1
Query: 73 VEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFEPAPALE-ETKGLA--VKSDNQLRKEKQERV------------QAEITEEFERLRGEGVSAAKAIWKASQ----KARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
VE +A L G A L + DA + + RV ARMTP KE L T L + LMCGDG+NDVGAL+++HVG+ALL GFG AN + PAP + E K +A K D+ + +++ +AE + + + G S A+ WKA Q K R +Q +R SAA M +E EDG V +V+ GDAS+AAPFTSKKPSI++ +D++R GRCTL L YQ++AL L SSY+ SVLYL
Sbjct: 845 VEKIALNRTLAMTGSVMMAL--LEHVPDAKYMLPHIRVYARMTPGHKELLITTLKDQEHFTLMCGDGANDVGALKQAHVGIALLCGFGSANAEK----PPAPVQQPEKKAIADAQKQDDATKLTPRQKAAQQAESCLVQEDKAEFMRDVQERKARGESWAE--WKAMQAMWAKQRARQMANRKNGTLTGSAALMA--AEDLEDGSVPMVKLGDASVAAPFTSKKPSISSAIDIIRMGRCTLVTTLQMYQILALNCLISSYSLSVLYL 1101
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3CA63_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CA63_9CHLO) HSP 1 Score: 144 bits (364), Expect = 2.230e-35 Identity = 115/305 (37.70%), Postives = 163/305 (53.44%), Query Frame = 1
Query: 55 EFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQMASFE-------PAPALEETK-------GLAVKSDNQLRK--EKQERVQAE-----------------------------ITEEFERLR--GEGVSAAKA----IWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
+F G+ LA +DLC G + A + G D G+ + F+V ARM P KE++ +VL T LMCGDG+NDVGALR++HVG+ALLSGFG N ++ + E P+ E++K G K Q+++ EK + +Q E + E RL+ GE ++ KA + K Q+++ K A++ FA SAAA+ EG EDG + +++ GDAS AAPFTSK PSI +V D+VRQGRCTL + Q++ L +L SSY+ SVLYL
Sbjct: 782 DFDLSGMHGLAKDNDLCITGKVLQHAFGMY-GDDLGQVLHLFKVFARMAPENKEKVLSVLNNLKMTTLMCGDGANDVGALRQAHVGVALLSGFGSLNADKGGTDEGKSDTGKDLPSEEDSKTEEDKPLGFFEKLQKQMKEAEEKAKIIQEERAKRTEDLXXXXXXXXXXXXXXXXXXMKDVEAETRRLQEMGESFASVKAMKNVVKKYQQESKQKVADAGGS--FAFSAAALAAREEGLEDGELPMLKLGDASNAAPFTSKFPSIRSVYDIVRQGRCTLVTSVQNNQIMVLTSLISSYSLSVLYL 1083
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A0L0DKD0_THETB (P-type ATPase superfamily n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DKD0_THETB) HSP 1 Score: 144 bits (363), Expect = 3.070e-35 Identity = 112/287 (39.02%), Postives = 146/287 (50.87%), Query Frame = 1
Query: 82 LAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ---------------------------------MASFEPAPA-LEETKGLAVKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWK------ASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVG---LVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
LA DL G + + A + YF+V ARMTP LKE++ L ++G LMCGDG+NDVGAL+++HVGLALLSGFG+AN +A E PA + K A K+ K V+A I E GE ++ K W AS KA+ A +R FA SAA + + + +E G G +V+ GDAS+A+PFTSKKPSI +DV+RQGRCTL L YQ++AL L SSY+ SVLYL
Sbjct: 904 LAVGADLAITGASLAELVEAVPDGAAWPAMVYFKVFARMTPELKEKVLAALKDSGHFTLMCGDGANDVGALKQAHVGLALLSGFGNANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAKPELTPAEIAAKKAEAAKAKQAEYAAKMAEVEANIRARSEA--GESMATVKEWWAFIQRETASAKAK---ASARKPKTFAESAALLAAQDDLSEGGGGEIPMVKLGDASIASPFTSKKPSIRGAVDVIRQGRCTLVTTLQMYQILALSCLISSYSLSVLYL 1185
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A5B8MN92_9CHLO (P-type cation-transporting ATPase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MN92_9CHLO) HSP 1 Score: 144 bits (363), Expect = 3.080e-35 Identity = 112/305 (36.72%), Postives = 163/305 (53.44%), Query Frame = 1
Query: 55 EFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ------MASFEPAPALEETK--------GLAVKSDNQLRK--EKQERVQAEITE-----------------------------EFERLRGEGVSAAK------AIWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDG-VGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYL 813
+F GVE+LA +DLC +G + A +G D G+ + F+V ARM P KE++ +VL T LMCGDG+NDVGALR++HVG+ALLSGFG NT++ +E+K G + Q+++ EK + +Q E + E +RL+ G S A+ + K Q+++ K A++ FA SAAA+ +G EDG + +++ GDAS+AAPFTSK PSI +V D++RQGRCTL + Q++ L +L SSY+ SVLYL
Sbjct: 912 DFDLSGVEELAKDNDLCVSGKVLQYAFD-KHGDDLGQALHLFKVFARMAPENKEKVLSVLNNRNMTTLMCGDGANDVGALRQAHVGVALLSGFGSLNTDKGNKDXXXXXXXXXXGKDESKEKEDAGQLGFFDRIQKQMKEAEEKAKVIQQERAKNADEXXXXXXXXXXXXXXXXXXXXXXXEAETKRLQEMGESFAQFKAMKNVVKKYQQESKQKVADAGGS--FAFSAAALAAREDGLEDGELPMLKLGDASIAAPFTSKFPSIRSVYDIIRQGRCTLVTSVQNNQIMVLTSLISSYSLSVLYL 1213
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3UVI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI2_HETAK) HSP 1 Score: 139 bits (351), Expect = 5.710e-34 Identity = 103/254 (40.55%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 76 EDLAWAHDLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQM------ASFEPAPALEE-TKGLA--VKSDNQLRKEKQERVQAEITEEFERLRGEGVSAAKAIWKASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLY 810
E L ++LC G A + ++ + + + Y +V ARM+P LKE+L L EAG+TVLMCGDG+ND+GAL+++ VGLALL GFGD NT + EP A + +K LA + ++K K+E + AE+ E ++ E + A+ + K + A Q S+ AASAA K S+ +D + G ASLAAPFTS KPSI++V D+VRQGRCT ++ YQ+ L AL + Y VLY
Sbjct: 146 EILQRRNNLCIMGSALKVLLK---DPEDRKHLHYVKVFARMSPELKEKLCFYLKEAGQTVLMCGDGANDIGALKQADVGLALLGGFGDENTGNQNNNGNATTEEPKGAFHQFSKTLADLTEQAQDMKKRKEEAIVAEVQEMMKK--NETIDMAQLVKKVN--AAEFQRIMNSKKGVAASAAKDLKRSD--DDQQAGIELGAASLAAPFTSTKPSISSVADLVRQGRCTQVNLMELYQISTLEALMTIYGMIVLY 390
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Match: A0A7S3F7A3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7A3_9VIRI) HSP 1 Score: 138 bits (348), Expect = 3.080e-33 Identity = 106/266 (39.85%), Postives = 153/266 (57.52%), Query Frame = 1
Query: 97 DLCANGPAFEAAIRLSNGSDAGRFVQYFRVLARMTPALKEELATVLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTNQ-----MASFEP----APALE---ETKGLAVKSDNQLRKEKQER-------VQAEITEEFERLRG-EGVSAAKAIWK---ASQKARNKQAESRSESPFAASAAAMFKESEGAEDGVGLVRAGDASLAAPFTSKKPSIAAVLDVVRQGRCTLAAVLHTYQMVALRALFSSYTNSVLYLMRVR 825
DLC GP+F AA+ + A VQ+ +V ARM P KE + + E G LMCGDG+NDVGAL+++HVG+ALLSGF ANT + + P A ALE + K A+K+ + K+K+E +AE+ +E ++ V+A K + A QK R + ++ A AA + +++EG V +V+ GDAS+AAPFTSK PSI + +D+VRQGRCTL + + Q++AL L ++Y+ S LYL VR
Sbjct: 943 DLCMTGPSFRAAVAADEATLA--HVQHVKVYARMAPEDKETVLRSMREHGLHTLMCGDGANDVGALKQAHVGVALLSGFAGANTTKAGEKALEDMTPEEHKAKALEIQTKAKERAIKARIEAEKDKKELQEMQKVVYEAELKKETDKGNAWAAVTAMKTATQHIMAEQKRRIAERRAKYGGGLAGQAAMLTEDAEGE---VPMVKLGDASVAAPFTSKLPSITSTVDIVRQGRCTLVSSVQMQQVLALNCLITAYSLSALYLDGVR 1203 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig12.1538.1 >prot_F-serratus_M_contig12.1538.1 ID=prot_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=polypeptide|length=275bp KKSSRRVTSRTKNAEEGLEFSWEGVEDLAWAHDLCANGPAFEAAIRLSNGback to top mRNA from alignment at F-serratus_M_contig12:489119..492336- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig12.1538.1 ID=mRNA_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=mRNA|length=3218bp|location=Sequence derived from alignment at F-serratus_M_contig12:489119..492336- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig12:489119..492336- >mRNA_F-serratus_M_contig12.1538.1 ID=mRNA_F-serratus_M_contig12.1538.1|Name=mRNA_F-serratus_M_contig12.1538.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig12:489119..492336- (Fucus serratus male)back to top |